Contig 003006:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019K05+                                                                   TCA
                      ____________________________________________________________
consensus                                                                      TCA
 
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rJMSF019K05+          CAGCTTTCAACTGCAAATGTGACTCAGAGAATTACTATCCCATATTCAGGTGCCTTTGCT
                      ____________________________________________________________
consensus             CAGCTTTCAACTGCAAATGTGACTCAGAGAATTACTATCCCATATTCAGGTGCCTTTGCT
 
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rJMSF019K05+          GTGATTAGACACCGGATCAGGCAAGTTTATGAGAGTGTCGAGTCTTCAACAGATGAGGAT
rJMSF049D13+          GTGATTAGACACCGGATCAGGCAAGTTTATGAGAGTGTCGAGTCTTCAACAGATGAGGAT
                      ____________________________________________________________
consensus             GTGATTAGACACCGGATCAGGCAAGTTTATGAGAGTGTCGAGTCTTCAACAGATGAGGAT
 
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rJMSF019K05+          TCTGGTGTTCCAACACTACGGGTTCATGATAGAGTTCTTGTTAAACAGGAGTCAGAGAAT
rJMSF049D13+          TCTGGTGTTCCAACACTACGGGTTCATGATAGAGTTCTTGTTAAACAGGAGTCAGAGAAT
                      ____________________________________________________________
consensus             TCTGGTGTTCCAACACTACGGGTTCATGATAGAGTTCTTGTTAAACAGGAGTCAGAGAAT
 
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rJMSF019K05+          CACCTTTCTGTGCATTGGGCAGCAGATCCTATTAGTGATATGGTCTCAGACTCTGTTGTA
rJMSF049D13+          CACCTTTCTGTGCATTGGGCAGCAGATCCTATTAGTGATATGGTCTCAGACTCTGTTGTA
                      ____________________________________________________________
consensus             CACCTTTCTGTGCATTGGGCAGCAGATCCTATTAGTGATATGGTCTCAGACTCTGTTGTA
 
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rJMSF019K05+          GCATTGGTTTTAAATGCAAACAGAGAAATGCCTAAGTTGGTTGTGGAATCAGAACCTGTA
rJMSF049D13+          GCATTGGTTTTAAATGCAAACAGAGAAATGCCTAAGTTGGTTGTGGAATCAGAACCTGTA
                      ____________________________________________________________
consensus             GCATTGGTTTTAAATGCAAACAGAGAAATGCCTAAGTTGGTTGTGGAATCAGAACCTGTA
 
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rJMSF019K05+          GCAAATGAGGAGGAAGATGCAAAGAAAACTGAGAAAATTATTCACACACTGTTGGTCTCT
rJMSF049D13+          GCAAATGAGGAGGAAGATGCAAAGAAAACTGAGAAAATTATTCACACACTGTTGGTCTCT
                      ____________________________________________________________
consensus             GCAAATGAGGAGGAAGATGCAAAGAAAACTGAGAAAATTATTCACACACTGTTGGTCTCT
 
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rJMSF019K05+          TTGTTTGGTGATGTAAAACTTGGGGAAAATGGCAAAATCGTTATAAATGTTGATGGGAAC
rJMSF049D13+          TTGTTTGGTGATGTAAAACTTGGGGAAAATGGCAAAATCGTTATAAATGTTGATGGGAAC
                      ____________________________________________________________
consensus             TTGTTTGGTGATGTAAAACTTGGGGAAAATGGCAAAATCGTTATAAATGTTGATGGGAAC
 
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rJMSF019K05+          ATAGCGGAACTTGACAAACAGACTGGTGATGTTGAAAGTGAAAACGATGGCCTCAAGGAA
rJMSF049D13+          ATAGCGGAACTTGACAAACAGACTGGTGATGTTGAAAGTGAAAACGATGGCCTCAAGGAA
                      ____________________________________________________________
consensus             ATAGCGGAACTTGACAAACAGACTGGTGATGTTGAAAGTGAAAACGATGGCCTCAAGGAA
 
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rJMSF019K05+          CGAGTTAAAACAGCATTTAGGCGAATCACAAGTGCTGTGAAGCCCATCCCTCTCTCAGCA
rJMSF049D13+          CGAGTTAAAACAGCATTTAGGCGAATCACAAGTGCTGTGAAGCCCATCCCTCTCTCAGCA
                      ____________________________________________________________
consensus             CGAGTTAAAACAGCATTTAGGCGAATCACAAGTGCTGTGAAGCCCATCCCTCTCTCAGCA
 
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rJMSF019K05+          CCTTAGATTAAG                                                
rJMSF049D13+          CCTTAGATTAAGGATTCATCGTCATCATGAGTATGTCAGCATAAAATACACAACCATACG
                      ____________________________________________________________
consensus             CCTTAGATTAAGGATTCATCGTCATCATGAGTATGTCAGCATAAAATACACAACCATACG
 
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rJMSF049D13+          CGACATCTTTTTCAGGATGTTCCGGCAGTATACCTTCTACTAACACCACCTTACCAGATT
                      ____________________________________________________________
consensus             CGACATCTTTTTCAGGATGTTCCGGCAGTATACCTTCTACTAACACCACCTTACCAGATT
 
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rJMSF049D13+          CTGGCAAAGCTTTCCAACAGTTCTTCAGCAGCTTCAGGCAATGTTCATCATCCCAATCTT
                      ____________________________________________________________
consensus             CTGGCAAAGCTTTCCAACAGTTCTTCAGCAGCTTCAGGCAATGTTCATCATCCCAATCTT
 
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rJMSF049D13+          GTAGTATCCACTGCAATTTTCAGAGCAATTTGCTTAGATCTTGTGTATAACAATGATACC
                      ____________________________________________________________
consensus             GTAGTATCCACTGCAATTTTCAGAGCAATTTGCTTAGATCTTGTGTATAACAATGATACC
 
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rJMSF049D13+          ATCATTTTCTTCTTTAGCAAGTGGTCTTTACACTAGTATATTTTACTGAGCAATGAGCAC
                      ____________________________________________________________
consensus             ATCATTTTCTTCTTTAGCAAGTGGTCTTTACACTAGTATATTTTACTGAGCAATGAGCAC