Contig 003002:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038D11+              CNGAGGAGAGTTATTTGCCCTGCNTGACAAGCAGCCCTCGAAAAATATTTAAAGAG
                      ____________________________________________________________
consensus                 CNGAGGAGAGTTATTTGCCCTGCNTGACAAGCAGCCCTCGAAAAATATTTAAAGAG
 
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rJMSF038D11+          GAATCTGCAAGGTTCTATGCGGCAGAAATTTTAATTGCCTTGGAATATCTTCATTGTTTA
                      ____________________________________________________________
consensus             GAATCTGCAAGGTTCTATGCGGCAGAAATTTTAATTGCCTTGGAATATCTTCATTGTTTA
 
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rJMSF038D11+          GGAATAGTATACCGGGACCTGAAACCAGAAAACATTCTACTCCAGGCAAATGGACATGTT
                      ____________________________________________________________
consensus             GGAATAGTATACCGGGACCTGAAACCAGAAAACATTCTACTCCAGGCAAATGGACATGTT
 
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rJMSF038D11+          GTGTTAACCGACTTTGATCTATCCTTCAAGACAACCTGTAAACTCCAAGTAATAAAACAC
                      ____________________________________________________________
consensus             GTGTTAACCGACTTTGATCTATCCTTCAAGACAACCTGTAAACTCCAAGTAATAAAACAC
 
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rJMSF038D11+          CCTCCACCCAAAAGAAGGTCTAGGAGTACTCCACCACTGACATTTGTTGCAGAACCAACT
rJMSF048P12+                                                 ACATTTGTTGCAGAACCAGTT
                      ____________________________________________________________
consensus             CCTCCACCCAAAAGAAGGTCTAGGAGTACTCCACCACTGACATTTGTTGCAGAACCAGTT
 
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rJMSF038D11+          ACACAGTCAAATTCATTTGTGGGAACTGAAGAATACATTGCTCCGGAAATTATTACAGGT
rJMSF048P12+          TCGCAGTCGAATTCATTCGTTGGGACTGAAGAGTACATTGCTCCAGAAATTATAACCGGT
                      ____________________________________________________________
consensus             TCGCAGTCGAATTCATTTGTTGGGACTGAAGAGTACATTGCTCCGGAAATTATTACCGGT
 
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rJMSF038D11+          GCAGGCCACAGCAGTGCTATTGATTGGTGGGCTTTAGGCGTTTTGATCTATGAGATGCTC
rJMSF048P12+          GCTGGTCACAGCAGTGCTATTGATTGGTGGGCTCTAGGTATTTTGCTGTATGAGATGTTG
                      ____________________________________________________________
consensus             GCTGGTCACAGCAGTGCTATTGATTGGTGGGCTTTAGGTGTTTTGCTGTATGAGATGTTG
 
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rJMSF038D11+          TATGGGCGCACGCCATTTAGAGGAAAGAATAGGCAGAAGACATTTGCCAACATCTTAAAC
rJMSF048P12+          TATGGGCGCACGCCATTTAGAGGAAAGAATAGGCAAAAGACATTTGCCAACATCTTAAAC
                      ____________________________________________________________
consensus             TATGGGCGCACGCCATTTAGAGGAAAGAATAGGCAGAAGACATTTGCCAACATCTTAAAC
 
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rJMSF038D11+          AAAGACCTCACATTCCCAAGTAGCGTTCCGGTAAGCCTGGCGGGGAGGCAGTTGATTCAT
rJMSF048P12+          AAAGATCTTACCTTCCCAAGCAGCATTCAGGTGAGCCTGGCTGCAAGGCAATTGATTCAC
                      ____________________________________________________________
consensus             AAAGATCTTACCTTCCCAAGTAGCGTTCCGGTGAGCCTGGCTGGGAGGCAGTTGATTCAT
 
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rJMSF038D11+          GCCTTACTAAATAGAGATCCTGGGAGCCGTTTGGGATCGAATGGAGGTGCCAATGAGATA
rJMSF048P12+          GCATTGTTAAATAGAGATCCTGCATGCCGTTTGGGATCAAATAGCGGTGCAAATGAGATC
                      ____________________________________________________________
consensus             GCCTTGTTAAATAGAGATCCTGGGTGCCGTTTGGGATCGAATGGCGGTGCCAATGAGATC
 
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rJMSF038D11+          AAACAGCACCCTTTCTTCTGCGGAATAAAATGGCCTCTGATCCGATGCATGAGCCCACCT
rJMSF048P12+          AAACAACATCCTTTCTTCCGGGAAATAAACTGGCCTCTCATCCGATGCATGAGCCCACCT
                      ____________________________________________________________
consensus             AAACAGCATCCTTTCTTCTGGGGAATAAACTGGCCTCTGATCCGATGCATGAGCCCACCT
 
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rJMSF038D11+          CCATTAGAAGCACCTCTTAAGTTAATTGGAAAAGAAGCAAATGCAAAGGAAGTGGATTGG
rJMSF048P12+          CCACTAGACGCGCCTCTTCAGTTAATTGGAAAGGAAACAAACACTAATGATGTAGACTGG
                      ____________________________________________________________
consensus             CCATTAGACGCGCCTCTTCAGTTAATTGGAAAGGAAGCAAATGCTAATGATGTGGATTGG
 
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rJMSF038D11+          GATGATGAGGGAGTTCTTGTTCATCACATGGACTTCTTCTAGA                 
rJMSF048P12+          AATGATGAGGGAGTGCTTGTTCATCCCATGGACTTCTTCTAGAGGGCTTTGTTTTCCCAA
                      ____________________________________________________________
consensus             GATGATGAGGGAGTTCTTGTTCATCCCATGGACTTCTTCTAGAGGGCTTTGTTTTCCCAA
 
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rJMSF048P12+          GATGGGGACTTTGTTCTACTCTATGCATGAACTACTATATAATTGCATGTTCCCACAAAA
                      ____________________________________________________________
consensus             GATGGGGACTTTGTTCTACTCTATGCATGAACTACTATATAATTGCATGTTCCCACAAAA
 
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rJMSF048P12+          GAGGAACATCATTAGACGAAGTTGAGGAGTTTTACATTGTACAGAGCTGATTTTAGCAAT
                      ____________________________________________________________
consensus             GAGGAACATCATTAGACGAAGTTGAGGAGTTTTACATTGTACAGAGCTGATTTTAGCAAT
 
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rJMSF048P12+          GTTAATCTATATATACTCCATTTTTCTTCTTTCAAGCTTTATTTGGTTCTCCCTCTTCGA
                      ____________________________________________________________
consensus             GTTAATCTATATATACTCCATTTTTCTTCTTTCAAGCTTTATTTGGTTCTCCCTCTTCGA
 
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rJMSF048P12+          AGGACTTGAAGAAGAGATGTAAAGTAGCCGGCAATAAACAGTAGATATCCACTACCGTCT
                      ____________________________________________________________
consensus             AGGACTTGAAGAAGAGATGTAAAGTAGCCGGCAATAAACAGTAGATATCCACTACCGTCT