Contig 002994:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF048F18-              CAGTTAAGCCCCATGGTTACATCAATCAGGGTTAAGCAAAGACACTGGACATAAGC
                      ____________________________________________________________
consensus                 CAGTTAAGCCCCATGGTTACATCAATCAGGGTTAAGCAAAGACACTGGACATAAGC
 
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JMSF048F18+                                           ACTATTACAAGACTTGACATTAGATATG
rJMSF048F18-          ACAGAAGGCTTGTGGGAAAACTCTTGTATCTAACTATTACAAGACTTGACATTAGATATG
                      ____________________________________________________________
consensus             ACAGAAGGCTTGTGGGAAAACTCTTGTATCTAACTATTACAAGACTTGACATTAGATATG
 
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JMSF048F18+           CCACTCAACAGTTATTTCAGTTCTTAGAATGCCCTACCAACATACATATGCAGGCCGCAG
rJMSF048F18-          CCACTCAACAGTTATTTCAGTTCTTAGAATGCCCTACCAACATACATATGCAGGCCGCAG
                      ____________________________________________________________
consensus             CCACTCAACAGTTATTTCAGTTCTTAGAATGCCCTACCAACATACATATGCAGGCCGCAG
 
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JMSF048F18+           CTCACAAGATTCTAAGGTACATCAAAGAAGCTCCAGGGCAAGGTCTCTTTTTCCCAGCCA
rJMSF048F18-          CTCACAAGATTCTAAGGTACATCAAAGAAGCTCCAGGGCAAGGTCTCTTTTTCCCAGCCA
                      ____________________________________________________________
consensus             CTCACAAGATTCTAAGGTACATCAAAGAAGCTCCAGGGCAAGGTCTCTTTTTCCCAGCCA
 
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JMSF048F18+           CTTCATCCTTGAAGCTGAAGGGGTTCACTGACTCAGATTGGGCTGCTTGTCCAGACACCA
rJMSF048F18-          CTTCATCCTTGAAGCTGAAGGGGTTCACTGACTCAGATTGGGCTGCTTGTCCAGACACCA
                      ____________________________________________________________
consensus             CTTCATCCTTGAAGCTGAAGGGGTTCACTGACTCAGATTGGGCTGCTTGTCCAGACACCA
 
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JMSF048F18+           GGAGATCTGTTACTGGTTTCTGCATATTCCTTAGCACATCTATGATCACTTGGAAGTCCA
rJMSF048F18-          GGAGATCTGTTACTGGTTTCTGCATATTCCTTAGCACATCTATGATCACTTGGAAGTCCA
                      ____________________________________________________________
consensus             GGAGATCTGTTACTGGTTTCTGCATATTCCTTAGCACATCTATGATCACTTGGAAGTCCA
 
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JMSF048F18+           AGAAGCAGGCCACCATATCTAGAAGCTCTTCTTAGAATATAGGGCCTTAGCCAATACGAG
rJMSF048F18-          AGAAGCAGGCCACCATATCTAGAAGCTCTTCTTAGAATATAGGGCCTTAGCCAATACGAG
                      ____________________________________________________________
consensus             AGAAGCAGGCCACCATATCTAGAAGCTCTTCTTAGAATATAGGGCCTTAGCCAATACGAG
 
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JMSF048F18+           CTTGTGAGATCTAATGGCTACTATATCTTGTGCAGGATGTGGGGATAGCTAAAAATCCTC
rJMSF048F18-          CTTGTGAGATCTAATGGCTACTATATCTTGTGCAGGATGTGGGGATAGCTAAAAATCCTC
                      ____________________________________________________________
consensus             CTTGTGAGATCTAATGGCTACTATATCTTGTGCAGGATGTGGGGATAGCTAAAAATCCTC
 
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JMSF048F18+           CAGCCTTGTTGTATTGTGACAACAAGTCTGCCATTGCTATAGCTGAAAACCCTGTGTTTC
rJMSF048F18-          CAGCCTTGTTGTATTGTGACAACAAGTCTGCCATTGCTATAGCTGAAAACCCTGTGTTTC
                      ____________________________________________________________
consensus             CAGCCTTGTTGTATTGTGACAACAAGTCTGCCATTGCTATAGCTGAAAACCCTGTGTTTC
 
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JMSF048F18+           ATTAGAGAACAAAACATGTTGAAATAGACTATCACCTAGTAAGAGAGAAACTACAAAAAG
rJMSF048F18-          ATTAGAGAACAAAACATGTTGAAATAGACTATCACCTAGTAAGAGAGAAACTACAAAAAG
                      ____________________________________________________________
consensus             ATTAGAGAACAAAACATGTTGAAATAGACTATCACCTAGTAAGAGAGAAACTACAAAAAG
 
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JMSF048F18+           GAGTCCTAAAGTTACTACATGTCTCCACATCTAACTAGCTTGCATATGTTTTTACCGAAC
rJMSF048F18-          GAGTCCTAAAGTTACTACATGTCTCCACATCTAACTAGCTTGCATATGTTTTTACCGAAC
                      ____________________________________________________________
consensus             GAGTCCTAAAGTTACTACATGTCTCCACATCTAACTAGCTTGCATATGTTTTTACCGAAC
 
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JMSF048F18+           CTCATGCACAGAATAGCTTCTATGATCTCATTTCCAAGCTGGAATTACACAACATGTACC
rJMSF048F18-          CTCATGCACAGAATAGCTTCTATGATCTCATTTCCAAGCTGGAATTACACAACATGTACC
                      ____________________________________________________________
consensus             CTCATGCACAGAATAGCTTCTATGATCTCATTTCCAAGCTGGAATTACACAACATGTACC
 
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JMSF048F18+           TTCCAGCTTGCGGGGGTGGTACCACATACAGCAGAAGGCACAAGTCTCAAACAGAAGGTC
rJMSF048F18-          TTCCAGCTTGCGGGGGTGGTACCACATACAGCAGAAGGCACANGTCTCAAACAGAAGGTC
                      ____________________________________________________________
consensus             TTCCAGCTTGCGGGGGTGGTACCACATACAGCAGAAGGCACAAGTCTCAAACAGAAGGTC