Contig 002991:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016D15Sequence447002991 (5)ref|XP_009593292.1|1e-11PREDICTED: defensin-like protein P322 [Nicotiana tomentosiformis]
JMSF039L19Sequence513002991 (5)ref|XP_009593292.1|2e-11PREDICTED: defensin-like protein P322 [Nicotiana tomentosiformis]465002991 (5)ref|XP_009593292.1|2e-11PREDICTED: defensin-like protein P322 [Nicotiana tomentosiformis]
JMSF048B07Sequence512002991 (5)ref|XP_009593292.1|2e-11PREDICTED: defensin-like protein P322 [Nicotiana tomentosiformis]465002991 (5)ref|XP_009593292.1|2e-11PREDICTED: defensin-like protein P322 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF048B07+                                       TTTTTTTTTTGGACGAAAACACAGAAATTGCA
JMSF039L19+                                      TTTTTTTTTTAGAACGAAAACACAGAAATTGCA
                      ____________________________________________________________
consensus                                        TTTTTTTTTTTGGACGAAAACACAGAAATTGCA
 
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JMSF048B07+           TAACTTGAGACAAGAAAACGAAACACACAACATGTTGACACATATATATATGTAATAACA
JMSF039L19+           TAACTTGAGACAAGAAAACGAAACACACAACATGTTGACACATATATATATGTAATAACA
rJMSF039L19-                                            TTGACACATATATATATGTAATAACA
JMFN016D15+                                            GTTGACACATATATATATGTAATAACA
rJMSF048B07-                                           GTTGACACATATATATATGTAATAACA
                      ____________________________________________________________
consensus             TAACTTGAGACAAGAAAACGAAACACACAACATGTTGACACATATATATATGTAATAACA
 
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JMSF048B07+           ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
JMSF039L19+           ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
rJMSF039L19-          ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
JMFN016D15+           ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
rJMSF048B07-          ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
                      ____________________________________________________________
consensus             ACCAAATCCAAACAACATGCATGCATGTTTGGATTATATTATTTGGGGGGGACATTTATT
 
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JMSF048B07+           TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
JMSF039L19+           TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
rJMSF039L19-          TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
JMFN016D15+           TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
rJMSF048B07-          TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
                      ____________________________________________________________
consensus             TATTTAGATATATATATATATAACAGTGATGGAATTGAAGTTGAAGCAAGCAATGTTGGT
 
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JMSF048B07+           TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
JMSF039L19+           TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
rJMSF039L19-          TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
JMFN016D15+           TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
rJMSF048B07-          TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
                      ____________________________________________________________
consensus             TATTAGCAGCAAGGCTTGTTGCAGGTGCAGATGGGGTTGTAGGAACCGGTGCAGCTCCCA
 
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JMSF048B07+           TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
JMSF039L19+           TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
rJMSF039L19-          TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
JMFN016D15+           TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
rJMSF048B07-          TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
                      ____________________________________________________________
consensus             TTGGAAAACCCCTCAGACTTGCAAACTGTATTGCAGTTGCCGTTGGCAAAAATACATACC
 
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JMSF048B07+           CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
JMSF039L19+           CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
rJMSF039L19-          CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
JMFN016D15+           CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
rJMSF048B07-          CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
                      ____________________________________________________________
consensus             CCTTTGAACGTTTGGCTCCGCGACGAGCACATTCTCGGACCCGCGGCCATTATTCCCATC
 
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JMSF048B07+           CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
JMSF039L19+           CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
rJMSF039L19-          CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
JMFN016D15+           CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
rJMSF048B07-          CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
                      ____________________________________________________________
consensus             CCAGAGGCCATGAAGAGCATCACCAAGAGTGAGACAGTTGCAAACAAACGAACTGAAGAA
 
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JMSF048B07+           GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAATGGGAATGCTG  
JMSF039L19+           GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAATGGGAATGCTG  
rJMSF039L19-          GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAATGGGAATGCTG  
JMFN016D15+           GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAA             
rJMSF048B07-          GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAATGGGAATGCTGCC
                      ____________________________________________________________
consensus             GAAGCAGCCATCGTATATATGTAGTTGAGAACAAAAGAGGGTTGAAATGGGAATGCTGCC