Contig 002989:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021J04Sequence542002989 (8)ref|XP_011079944.1|4e-80PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1| 596002989 (8)ref|XP_011079944.1|7e-80PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|
JMSF026D13Sequence662002989 (8)ref|XP_011079944.1|1e-78PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1| 714002989 (8)ref|XP_011079944.1|2e-78PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|
JMSF037N07Sequence683002989 (8)ref|XP_011079944.1|2e-79PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1| 631002989 (8)ref|XP_011079944.1|1e-79PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|
JMSF047P06Sequence683002989 (8)ref|XP_011079944.1|2e-79PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1| 636002989 (8)ref|XP_011079944.1|1e-79PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|

Alignment

This contig is upended


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rJMSF037N07-                                       TATTTTATCCAATCCCAGTTTGAACCCACAA
rJMFF021J04-                                      ATATTTTATCCAATCCCAGTTTGAACCCACAA
JMSF026D13+                                                              AACCCACAA
rJMSF047P06-                                  GAACATATTTTATCCAATCCCAGTTTGAACCCACAA
                      ____________________________________________________________
consensus                                     GAACATATTTTATCCAATCCCAGTTTGAACCCACAA
 
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rJMSF037N07-          TCATACAACACGATGGAAACACAAATTTGCAGCCTGAGAATCCTAAACCACAAGGAAAAT
rJMFF021J04-          TCATACAACACGATGGAAACACAAATTTGCAGCCTGAGAATCCTAAACCACAAGGAAAAT
JMSF026D13+           TCATACAACACGATGGAAACACAAATTTGCAGCCTGAGAATCCTAAACCACAAGGAAAAT
JMFF021J04+                                                           CACAAGGAAAAT
rJMSF047P06-          TCATACAACACGATGGAAACACAAATTTGCAGCCTGAGAATCCTAAACCACAAGGAAAAT
                      ____________________________________________________________
consensus             TCATACAACACGATGGAAACACAAATTTGCAGCCTGAGAATCCTAAACCACAAGGAAAAT
 
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rJMSF037N07-          GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
rJMFF021J04-          GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
JMSF026D13+           GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
JMFF021J04+           GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
rJMSF047P06-          GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
                      ____________________________________________________________
consensus             GTCAAGCAGTACAAATTTTCACTTTGCTGGCAAAACATATAGGTCTAGTAACAAGCATAC
 
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rJMSF037N07-          AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
rJMFF021J04-          AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
rJMSF026D13-                                AGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
JMSF026D13+           AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
JMFF021J04+           AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
JMSF047P06+                                             TCCAGATGCCACAGATTCGGTAGAGA
JMSF037N07+                                             TCCAGATGCCACAGATTCGGTAGAGA
rJMSF047P06-          AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
                      ____________________________________________________________
consensus             AGAATTGTTACTCAAAACATGTAGTTCAACGCCTTCCAGATGCCACAGATTCGGTAGAGA
 
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rJMSF037N07-          AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
rJMFF021J04-          AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
rJMSF026D13-          AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTGGGGATGGTCCTTTG
JMSF026D13+           AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTGGGGATGGTCCTTTG
JMFF021J04+           AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
JMSF047P06+           AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
JMSF037N07+           AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
rJMSF047P06-          AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
                      ____________________________________________________________
consensus             AGAGGTACTTCACCCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATGGTCCTTTG
 
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rJMSF037N07-          AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
rJMFF021J04-          AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
rJMSF026D13-          AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
JMSF026D13+           AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
JMFF021J04+           AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
JMSF047P06+           AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
JMSF037N07+           AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
rJMSF047P06-          AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
                      ____________________________________________________________
consensus             AAGGAATCTACAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAACCTTATCA
 
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rJMSF037N07-          TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
rJMFF021J04-          TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
rJMSF026D13-          TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
JMSF026D13+           TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
JMFF021J04+           TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
JMSF047P06+           TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
JMSF037N07+           TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
rJMSF047P06-          TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
                      ____________________________________________________________
consensus             TGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGTGAACTCTT
 
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rJMSF037N07-          TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
rJMFF021J04-          TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
rJMSF026D13-          TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
JMSF026D13+           TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
JMFF021J04+           TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
JMSF047P06+           TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
JMSF037N07+           TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
rJMSF047P06-          TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
                      ____________________________________________________________
consensus             TAAAAGCATCTTCAATCTGTTTCACCGTTGTTTTTGAATCCACAATAAGGTAGTTTGTTT
 
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rJMSF037N07-          TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
rJMFF021J04-          TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
rJMSF026D13-          TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
JMSF026D13+           TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
JMFF021J04+           TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
JMSF047P06+           TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
JMSF037N07+           TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
rJMSF047P06-          TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
                      ____________________________________________________________
consensus             TTCTCCTCAAGTCCATGTTGCCAACTCCAGCCATTAAAAATCCAGTGATCGTATCCTCAT
 
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rJMSF037N07-          CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
rJMFF021J04-          CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
rJMSF026D13-          CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
JMSF026D13+           CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
JMFF021J04+           CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
JMSF047P06+           CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
JMSF037N07+           CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
rJMSF047P06-          CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
                      ____________________________________________________________
consensus             CGCCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGAGGTCGGTTTGCCATCC
 
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rJMSF037N07-          TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTTGTTCCTGGTC
rJMFF021J04-          TAAACAAATTTGCTTATGCAGCTA                                    
rJMSF026D13-          T                                                           
JMSF026D13+           T                                                           
JMFF021J04+           TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTT          
JMSF047P06+           TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTTGTTCCTGGTC
JMSF037N07+           TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTTGTTCCTGGTC
rJMSF047P06-          TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTTGTTCCTGGTC
                      ____________________________________________________________
consensus             TAAACAAATTTGCTTATGCAGCTAAAAATTCACCGTTAAATAGACACCTTGTTCCTGGTC