Contig 002988:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047M01Sequence692016885ref|XP_011082871.1|4e-77PREDICTED: cationic amino acid transporter 8, vacuolar [Sesamum indicum]710002988 (2)ref|XP_006349994.1|9e-43PREDICTED: cationic amino acid transporter 8, vacuolar-like [Solanum tuberosum]
JMSF048M01Sequence211002988 (2)ref|XP_007211395.1|3e-13hypothetical protein PRUPE_ppa003337mg [Prunus persica] gb|EMJ12594.1| hypotheti

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+                    CGTCCTTCACGAGCTNGGATGTCTTGTCTAGCGTGTTCTCGTTCAGCACG
                      ____________________________________________________________
consensus                       CGTCCTTCACGAGCTNGGATGTCTTGTCTAGCGTGTTCTCGTTCAGCACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048M01+                                                               TAAGGAG
rJMSF047M01+          CTTTCCATTTTCATGCTAATGGCGGTTGCTTTGCTGGTTAGGCGATACTACGTTAAGGAG
                      ____________________________________________________________
consensus             CTTTCCATTTTCATGCTAATGGCGGTTGCTTTGCTGGTTAGGCGATACTACGTTAAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048M01+          CAGACTACGAGAGGCGATTATATCAGATTCTTGGTGTGTCCGTTTGTCATCATGTGTTCA
rJMSF047M01+          CAGACTACGAGAGGCGATTATATCAGATTCTTGGTGTGTCTGTTTGTCATCATGTGTTCA
                      ____________________________________________________________
consensus             CAGACTACGAGAGGCGATTATATCAGATTCTTGGTGTGTCTGTTTGTCATCATGTGTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048M01+          TCGATTGGAGCGACGGTTCTTTGGAACCGGGATAGTAGAGGATGGGTTGGGTATAGTGTG
rJMSF047M01+          TCGATTGGAGCGACGGTTCTTTGGAACCGGGATAGTAGAGGATGGGTTGGGTATAGTGTG
                      ____________________________________________________________
consensus             TCGATTGGAGCGACGGTTCTTTGGAACCGGGATAGTAGAGGATGGGTTGGGTATAGTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048M01+          GCGGGCGTTTTATGGGGTTTGGGCACNTTAGGAATGGGATNGCTTCCGAAAAAGAGAGTT
rJMSF047M01+          GCGGGCGTTTTATGGGGTTTGGGCACGTTAGGAATGGGATTGCTTCCGAAAAAGAGAGTT
                      ____________________________________________________________
consensus             GCGGGCGTTTTATGGGGTTTGGGCACGTTAGGAATGGGATTGCTTCCGAAAAAGAGAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF048M01+          CCGAAAGTTTGGGGAGTTCCC                                       
rJMSF047M01+          CCGAAAGTTTGGGGAGTTCCCCTCGTTCCTTTGCTGCCATCGCTGTCGATTGGGATGAAC
                      ____________________________________________________________
consensus             CCGAAAGTTTGGGGAGTTCCCCTCGTTCCTTTGCTGCCATCGCTGTCGATTGGGATGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          TTGTTTCTTATAGGGTCTCTTGGTGCCGTCGCGTTTTGGAGGTTCTTTGTATGTAGCGCC
                      ____________________________________________________________
consensus             TTGTTTCTTATAGGGTCTCTTGGTGCCGTCGCGTTTTGGAGGTTCTTTGTATGTAGCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          GTGATGGTAGTTTACTACCTACTCGTTGGTGTTCATACTACGTACGATATGGCTCATCAA
                      ____________________________________________________________
consensus             GTGATGGTAGTTTACTACCTACTCGTTGGTGTTCATACTACGTACGATATGGCTCATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          GGTCATCCCGCTTTGAGAACTGAAGAGGGGAAAGGCGCTTCCGATCAAGAGTTATAGTAG
                      ____________________________________________________________
consensus             GGTCATCCCGCTTTGAGAACTGAAGAGGGGAAAGGCGCTTCCGATCAAGAGTTATAGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          GTTAGATGCCGAAAATCTGCATCTTCATTTATGTACATTTCACCAGATGTCAAGGTTCTT
                      ____________________________________________________________
consensus             GTTAGATGCCGAAAATCTGCATCTTCATTTATGTACATTTCACCAGATGTCAAGGTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          TGGCTCAGTGTCTAGTATTAAAGGTAGAATATGGTTTCATTTTAGTTTAGGATGGTTTCT
                      ____________________________________________________________
consensus             TGGCTCAGTGTCTAGTATTAAAGGTAGAATATGGTTTCATTTTAGTTTAGGATGGTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF047M01+          TTTTATTCTTTTGGAGTTTGCAGTGGTGATCATTGACAAGCTAATAGACATATCACATAT
                      ____________________________________________________________
consensus             TTTTATTCTTTTGGAGTTTGCAGTGGTGATCATTGACAAGCTAATAGACATATCACATAT