| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002C13 | Sequence | 616 | 012863 (5) | ref|XP_009777440.1| | 108 | PREDICTED: probable protein S-acyltransferase 1 [Nicotiana sylvestris] | 722 | 002986 (5) | |||
| JMFF006N01 | Sequence | 498 | 012863 (5) | ref|XP_002523676.1| | 3e-19 | zinc finger protein, putative [Ricinus communis] gb|EEF38711.1| zinc finger prot | 620 | 002986 (5) | |||
| JMFF013P12 | Sequence | 500 | 012863 (5) | gb|KDP21990.1| | 4e-19 | hypothetical protein JCGZ_02880 [Jatropha curcas] | 780 | 002986 (5) | |||
| JMFF016E19 | Sequence | 629 | 012863 (5) | ref|XP_009777440.1| | 105 | PREDICTED: probable protein S-acyltransferase 1 [Nicotiana sylvestris] | 764 | 002986 (5) | ref|XP_009777440.1| | 38.1 | PREDICTED: probable protein S-acyltransferase 1 [Nicotiana sylvestris] |
| JMSF047F12 | Sequence | 725 | 012863 (5) | ref|XP_009777440.1| | 212 | PREDICTED: probable protein S-acyltransferase 1 [Nicotiana sylvestris] | 800 | 002986 (5) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF016E19+ GAAGGAAATGANGATAGCTGGAAAGAGAAAANTGATATTGAGCTNGGAAGTAGGT
____________________________________________________________
consensus GAAGGAAATGANGATAGCTGGAAAGAGAAAANTGATATTGAGCTNGGAAGTAGGT
. : . : . : . : . : . :
rJMFF016E19+ TGGCAGAAGAGAATGGCATTTCACTCCCCGAAATTTTTGAGAAACTTGGAACTTGATGAG
rJMFF013P12+ TGATGAG
rJMSF047F12+ TGATGAG
____________________________________________________________
consensus TGGCAGAAGAGAATGGCATTTCACTCCCCGAAATTTTTGAGAAACTTGGAACTTGATGAG
. : . : . : . : . : . :
rJMFF016E19+ ATAGAGGATGATTTGGAAAATATGGAAGGTAACGGGAGAAGTAACTCTGCAGATCGGGGA
rJMFF013P12+ ATAGAGGATGATTTGGAAAATATGGAAGGTAACGGGAGAAGTAACTCTGCAGATCGGGGA
rJMFF002C13+ TCTGCAGATCGGGGA
rJMSF047F12+ ATAGAGGATGATTTGGAAAATATGGAAGGTAACGGGAGAAGTAACTCTGCAGATCGGGGA
____________________________________________________________
consensus ATAGAGGATGATTTGGAAAATATGGAAGGTAACGGGAGAAGTAACTCTGCAGATCGGGGA
. : . : . : . : . : . :
rJMFF016E19+ AGTACCGTTAGCTCAATGCACAAGATCGATATTATGGAGCAGAAAATTTCTGCAGAGAAG
rJMFF013P12+ AGTACCGTTAGCTCAATGCACAAGATCGATATTATGGAGCAGAAAATTTCTGCAGAGAAG
rJMFF002C13+ AGTACCGTTAGCTCAATGCACAAGATCGATATTATGGAGCAGAAAATTTCTGCAGAGAAG
rJMSF047F12+ AGTACCGTTAGCTCAATGCACAAGATCGATATTATGGAGCAGAAAATTTCTGCAGAGAAG
____________________________________________________________
consensus AGTACCGTTAGCTCAATGCACAAGATCGATATTATGGAGCAGAAAATTTCTGCAGAGAAG
. : . : . : . : . : . :
rJMFF016E19+ AATGCCCTTTCCCTTCCCAACCGGTTGGATAATGTTGGCACCGAAAATAACTCCATAAAC
rJMFF013P12+ AATGCCCTTTCCCTTCCCAACCGGTTGGATAATGTTGGCACCGAAAATAACTCCATAAAC
rJMFF002C13+ AATGCCCTTTCCCTTCCCAACCGGTTGGATAATGTTGGCACCGAAAATAACTCCATAAAC
rJMFF006N01+ GGTTGGATAATGTTNGCACCGAAAATAACTCCATAAAC
rJMSF047F12+ AATGCCCTTTCCCTTCCCAACCGGTTGGATAATGTTGGCACCGAAAATAACTCCATAAAC
____________________________________________________________
consensus AATGCCCTTTCCCTTCCCAACCGGTTGGATAATGTTGGCACCGAAAATAACTCCATAAAC
. : . : . : . : . : . :
rJMFF016E19+ AAGGATGAAAAATATAGAT-CTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
rJMFF013P12+ AAGGATGAAAAATATAGAT-CTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
rJMFF002C13+ AAGGATGAAAAATATAGAT-CTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
rJMFF006N01+ AAGGATGAAAAATATAGATCCTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
rJMSF047F12+ AAGGATGAAAAATATAGAT-CTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
____________________________________________________________
consensus AAGGATGAAAAATATAGAT-CTGATGGTGAATCGCCCTTCTATTCTCTTGAAGATGATGC
. : . : . : . : . : . :
rJMFF016E19+ AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
rJMFF013P12+ AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
rJMFF002C13+ AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
rJMFF006N01+ AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
rJMSF047F12+ AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
____________________________________________________________
consensus AAAAGACTCAACGTCAAGAATACCTGAACAATTATCGACCTCCAATCAAATTGAAATCCC
. : . : . : . : . : . :
rJMFF016E19+ AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
rJMFF013P12+ AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
rJMFF002C13+ AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
rJMFF006N01+ AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
rJMSF047F12+ AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
____________________________________________________________
consensus AAGTAGTCACGACAGTTTGCAGGTACAACAAATGTCATAGGGAGACTCTCCCGTGCTTTC
. : . : . : . : . : . :
rJMFF016E19+ CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
rJMFF013P12+ CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
rJMFF002C13+ CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
rJMFF006N01+ CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
rJMSF047F12+ CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
____________________________________________________________
consensus CACAACCCAGGTATTATACACATAAGCAGAGAATCTCTCTCTCGATCATCTTGCCTTTGG
. : . : . : . : . : . :
rJMFF016E19+ TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
rJMFF013P12+ TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
rJMFF002C13+ TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
rJMFF006N01+ TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
rJMSF047F12+ TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
____________________________________________________________
consensus TGGGGCGGGCTTTTAAGGCCGGCCCGGGATTCCAGATTAGAAGATTTGCTTGTGGGTTGG
. : . : . : . : . : . :
rJMFF016E19+ TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
rJMFF013P12+ TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
rJMFF002C13+ TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
rJMFF006N01+ TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
rJMSF047F12+ TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
____________________________________________________________
consensus TTGCGGGTTATATTAGACAATTGAGTGGTGCTGACATGGTGAATAAAGTGTAGGATCTTG
. : . : . : . : . : . :
rJMFF016E19+ ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
rJMFF013P12+ ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
rJMFF002C13+ ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
rJMFF006N01+ ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
rJMSF047F12+ ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
____________________________________________________________
consensus ATCCTCGTCGTCGTGAAAATTACATTTATTGATGAGTGGATGTATAGTTATTTGTTGAAC
. : . : . : . : . : . :
rJMFF016E19+ CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACT
rJMFF013P12+ CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACTACATGGTTTG
rJMFF002C13+ CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACTACATGGTTTG
rJMFF006N01+ CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACTACATGGTTTG
rJMSF047F12+ CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACTACATGGTTTG
____________________________________________________________
consensus CTCTCCTCATTGTTCATTGTGTGAGTATCTGAAATTCATGGCCAAAGACTACATGGTTTG
. : . : . : . : . : . :
rJMFF013P12+ AAGGCTAAGGTTGATCTGTTATAAGAAAACAAGAAATACTAACCTCAGAACCTGGTTTGT
rJMFF002C13+ AAGGCTAAGGTTGATCTGTTATAAGAAAACAAGAAATACTAACCTCAGAACCTGGTTTGT
rJMFF006N01+ AAGGCTAAGGTTGATCTGTTATAAGAAAACAAGAAATACTAACCTCAGAACCTGGTTTGT
rJMSF047F12+ AAGGCTAAGGTTGATCTGTTATAAGAAAACAAGAAATACTAACCTCAGAACCTGGTTTGT
____________________________________________________________
consensus AAGGCTAAGGTTGATCTGTTATAAGAAAACAAGAAATACTAACCTCAGAACCTGGTTTGT
. : . : . : . : . : . :
rJMFF013P12+ GTCTATGAGTTTTGCCAAATGCAGCAAAAGATCAAAGGAT
rJMFF002C13+ GTCTATGAGTTTTGCCAAATGCAGCAAAAGATCAAAGGATGG
rJMFF006N01+ GTCTATGAGTTTTGCCAAATGCAGCAAAAGATCAAAGGAT
rJMSF047F12+ GTCTATGAGTTTTGCCAAATGCAGCAAAAGATCAAAGGATGGTGTAATATTCATGCTGGT
____________________________________________________________
consensus GTCTATGAGTTTTGCCAAATGCAGCAAAAGATCAAAGGATGGTGTAATATTCATGCTGGT