Contig 002973:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005F14Sequence408002973 (3)dbj|BAF64710.1|3e-05putative transposase [Ipomoea tricolor]514001370 (3)ref|XP_011086590.1|87.4PREDICTED: uncharacterized protein LOC105168272 [Sesamum indicum]
JMSF044I05Sequence814002973 (3)dbj|BAF64710.1|6e-15putative transposase [Ipomoea tricolor]788002973 (3)dbj|BAF64710.1|1e-05putative transposase [Ipomoea tricolor]

Alignment

This contig is upended


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JMSF044I05-                                                               GGCATTTC
                      ____________________________________________________________
consensus                                                                 GGCATTTC
 
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JMSF044I05-           ATTTCACTCTGAACCTCTCTAGCTCTTTACACGATGAAGAACTTCCTCTATCTCTCTAAA
                      ____________________________________________________________
consensus             ATTTCACTCTGAACCTCTCTAGCTCTTTACACGATGAAGAACTTCCTCTATCTCTCTAAA
 
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JMSF044I05-           ATTCTCGCTCGATTTACCGTTTAATCTTACCATTCTGAGTGTATAATCAGTATATCCATT
                      ____________________________________________________________
consensus             ATTCTCGCTCGATTTACCGTTTAATCTTACCATTCTGAGTGTATAATCAGTATATCCATT
 
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JMSF044I05-           CCAAAATCAATACTTGATTTTGGAATAGATCTTTGAATCTGATGTCTCATAACAACACTA
                      ____________________________________________________________
consensus             CCAAAATCAATACTTGATTTTGGAATAGATCTTTGAATCTGATGTCTCATAACAACACTA
 
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JMSF044I05-           CTTAGCAAGGAAGGGAGTTCGCAGCACCCAGTTCCAGCATAATGTTTCGCTCCAGAATTC
                      ____________________________________________________________
consensus             CTTAGCAAGGAAGGGAGTTCGCAGCACCCAGTTCCAGCATAATGTTTCGCTCCAGAATTC
 
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JMSF044I05-           ATCTCACAATCAATTCAGGTTAAATGATGTTCGCAGTCCTGTACACAGTATCAGTACTGT
                      ____________________________________________________________
consensus             ATCTCACAATCAATTCAGGTTAAATGATGTTCGCAGTCCTGTACACAGTATCAGTACTGT
 
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JMSF005F14+                      GGATGGTGAATTTTATGTTCCAACTGAAATTGTAGGCATTGAAGGGTCT
JMSF044I05-           CCTAGTCTACAGGATGGTGAATTTTATGTTCCAACTGAAATTGTAGGCATTGAAGGGTCT
                      ____________________________________________________________
consensus             CCTAGTCTACAGGATGGTGAATTTTATGTTCCAACTGAAATTGTAGGCATTGAAGGGTCT
 
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JMSF005F14+           TTTGGCTGGGTGTACATCTCTTGCACGTCACCGAGATGCAACAGAAAGCTCAAGCAAGAA
JMSF044I05-           TTTGGCTGGGTGTACATCTCTTGCACGTCACCGAGATGCAACAGAAAGCTCAAGCAAGAA
                      ____________________________________________________________
consensus             TTTGGCTGGGTGTACATCTCTTGCACGTCACCGAGATGCAACAGAAAGCTCAAGCAAGAA
 
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JMSF005F14+           GGAGATGATCTGGTTTATTCAACTTGTGAGAAAAAAATATAAAGAAGGAATGATCAGGTA
JMSF044I05-           GGAGATGATCTGGTTTATTCAACTTGTGAGAAAAAAATATAAAGAAGGAATGATCAGGTA
                      ____________________________________________________________
consensus             GGAGATGATCTGGTTTATTCAACTTGTGAGAAAAAAATATAAAGAAGGAATGATCAGGTA
 
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JMSF005F14+           TAGGGTGATAGTGAGGGTTCTAGATAAATATTTATGAGATTCTCCCTTCCTTTTATGGGA
JMSF044I05-           TAGGGTGATAGTGAGGGTTCTAGATAAATATTTATGAGATTCTCCCTTCCTTTTATGGGA
rJMSF044I05+                                                              TTATGGGA
                      ____________________________________________________________
consensus             TAGGGTGATAGTGAGGGTTCTAGATAAATATTTATGAGATTCTCCCTTCCTTTTATGGGA
 
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JMSF005F14+           TAGGGAGTGTTCAGATTTAGTGGGTATCCCTGCTAGCATTTTGTACAACAAGG       
JMSF044I05-           TAGGGAGTGTTCAGATTTAGTGGGTATCCCTGCTAGCATTTTGTACAACAAGGTAAACTT
rJMSF044I05+          TAGGGAGTGTTCAGATTTAGTGGGTATCCCTGCTAGCATTTTGTACAACAAGGTAAACTT
                      ____________________________________________________________
consensus             TAGGGAGTGTTCAGATTTAGTGGGTATCCCTGCTAGCATTTTGTACAACAAGGTAAACTT
 
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JMSF044I05-           ACATTCCTAAAAAATGGTAATATGATAAACTAACATTTATAAGGATTATTTTTAGTGGTT
rJMSF044I05+          ACATTCCTAAAAAATGGTAATATGATAAACTAACATTTATAAGGATTATTTTTAGTGGTT
                      ____________________________________________________________
consensus             ACATTCCTAAAAAATGGTAATATGATAAACTAACATTTATAAGGATTATTTTTAGTGGTT
 
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JMSF044I05-           TGTTTATAAAAAATGGATTTTGTCTTTGTTTTAGGGGTCTGATATTCCAAAAGAATTGGA
rJMSF044I05+          TGTTTATAAAAAATGGATTTTGTCTTTGTTTTAGGGGTCTGATATTCCAAAAGAATTGGA
                      ____________________________________________________________
consensus             TGTTTATAAAAAATGGATTTTGTCTTTGTTTTAGGGGTCTGATATTCCAAAAGAATTGGA
 
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JMSF044I05-           ATCCTTAATTGGAATGACAATGATATTTAAGATATCATTAAAAATGAACCAAATGAAGGG
rJMSF044I05+          ATCCTTAATTGGAATGACAATGATATTTAAGATATCATTAAAAATGAACCAAATGAAGGG
                      ____________________________________________________________
consensus             ATCCTTAATTGGAATGACAATGATATTTAAGATATCATTAAAAATGAACCAAATGAAGGG
 
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JMSF044I05-           AGCTACTCCAGCCTTTACTATTATGA                                  
rJMSF044I05+          AGCTACTCCAGCCTTTACTATTATGAGAGTTTTGAGGGATGAACTCTTAGTCTCTACGTA
                      ____________________________________________________________
consensus             AGCTACTCCAGCCTTTACTATTATGAGAGTTTTGAGGGATGAACTCTTAGTCTCTACGTA
 
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rJMSF044I05+          CGGTTCAAAATTGAAGGAGAACCAATTCCAAGAAAAAGATTTGATGCCTAAAATGATAAA
                      ____________________________________________________________
consensus             CGGTTCAAAATTGAAGGAGAACCAATTCCAAGAAAAAGATTTGATGCCTAAAATGATAAA
 
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rJMSF044I05+          TGAGGATGAAGTGGAGGATGATGAATCAGATCAGGTAATTATTTATATTTCACAAAAAAA
                      ____________________________________________________________
consensus             TGAGGATGAAGTGGAGGATGATGAATCAGATCAGGTAATTATTTATATTTCACAAAAAAA
 
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rJMSF044I05+          TGTCTTTAAAAAAATTTTTTGTGGTTAAAAATTAATATTTTTAAAATTAACAAGAAGCTT
                      ____________________________________________________________
consensus             TGTCTTTAAAAAAATTTTTTGTGGTTAAAAATTAATATTTTTAAAATTAACAAGAAGCTT
 
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rJMSF044I05+          CTAATGGAAATGAAGTAAACAGCCTAATCAGTGCAGAATAGTCCAAAAGGCTTGACACTG
                      ____________________________________________________________
consensus             CTAATGGAAATGAAGTAAACAGCCTAATCAGTGCAGAATAGTCCAAAAGGCTTGACACTG
 
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rJMSF044I05+          ACTTTGAAGACTCAAATGGTGTGAAGAAATCCCTTATGGACCAATTCTCTTCATCAAACA
                      ____________________________________________________________
consensus             ACTTTGAAGACTCAAATGGTGTGAAGAAATCCCTTATGGACCAATTCTCTTCATCAAACA
 
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rJMSF044I05+          AACTTAAGAAGACAAAAATGTGACTGTTAAGCAAGAAAAAATTTAATTTCTGAGTGTATT
                      ____________________________________________________________
consensus             AACTTAAGAAGACAAAAATGTGACTGTTAAGCAAGAAAAAATTTAATTTCTGAGTGTATT
 
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rJMSF044I05+          TCAGAAGTGGTCATTGGCTTGAGACAATATACCACCTTTGTGTGGTATTTTATCTTTTTT
                      ____________________________________________________________
consensus             TCAGAAGTGGTCATTGGCTTGAGACAATATACCACCTTTGTGTGGTATTTTATCTTTTTT
 
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rJMSF044I05+          GTGGTCTGGTATTGGGACATTCTGAATCAATAGGCAATGTGGGCAGTGCCTATCCAAACC
                      ____________________________________________________________
consensus             GTGGTCTGGTATTGGGACATTCTGAATCAATAGGCAATGTGGGCAGTGCCTATCCAAACC