Contig 002971:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF044E14+                                                                  TCAT
                      ____________________________________________________________
consensus                                                                     TCAT
 
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rJMSF044E14+          GCTGGTTATGTTAGCAGCGGGAACAGATACATCATCGGGGACTATGGAGTGGGGGCTATC
                      ____________________________________________________________
consensus             GCTGGTTATGTTAGCAGCGGGAACAGATACATCATCGGGGACTATGGAGTGGGGGCTATC
 
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rJMSF030I10+                                    TGAAGAAGGCGCAAATGGAGATTGACGATCGGGT
rJMSF044E14+          ACTTCTGCTAAACCACCCACAAGTCTTGAAGAAGGCGCAAATGGAGATTGACGATCGGGT
                      ____________________________________________________________
consensus             ACTTCTGCTAAACCACCCACAAGTCTTGAAGAAGGCGCAAATGGAGATTGACGATCGGGT
 
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rJMSF030I10+          CGGACATGAACGGCTACTCGAGGAGTCAGATTTGGCCAATCTCCCTTACCTGAACTGCAT
rJMSF044E14+          CGGACATGAACGGCTACTCGAGGAGTCAGATTTGGCCAATCTCCCTTACCTGAACTGCAT
                      ____________________________________________________________
consensus             CGGACATGAACGGCTACTCGAGGAGTCAGATTTGGCCAATCTCCCTTACCTGAACTGCAT
 
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rJMSF030I10+          ACTAAAAGAAACGTTGAGAATGTACCCTGTTGGCCCTCTGTTAATCCCCCACGAGTCCTC
rJMSF044E14+          ACTAAAAGAAACGTTGAGAATGTACCCTGTTGGCCCTCTGTTAATCCCCCACGAGTCCTC
                      ____________________________________________________________
consensus             ACTAAAAGAAACGTTGAGAATGTACCCTGTTGGCCCTCTGTTAATCCCCCACGAGTCCTC
 
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rJMSF030I10+          AGAAGAGTGCACCGTCGCCGGCTACCGTATCCCCGCCGGCACAATGCTGATGATCAACTT
rJMSF044E14+          AGAAGAGTGCACCGTCGCCGGCTACCGTATCCCCGCCGGCACAATGCTGATGATCAACTT
                      ____________________________________________________________
consensus             AGAAGAGTGCACCGTCGCCGGCTACCGTATCCCCGCCGGCACAATGCTGATGATCAACTT
 
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rJMSF030I10+          GTACTCCATCCAAAGAGACCCCAAGAACTGGGACGAGCCGGAAAAGTTCAGGCCGGAGAG
rJMSF044E14+          GTACTCCATCCAAAGAGACCCCAAGAACTGGGACGAGCCGGAAAAGTTCAGGCCGGAGAG
                      ____________________________________________________________
consensus             GTACTCCATCCAAAGAGACCCCAAGAACTGGGACGAGCCGGAAAAGTTCAGGCCGGAGAG
 
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rJMSF030I10+          GTTTCAAGGCTCAGAAGGAGTGATGAGAGATGGGTACAAGATGATGCCTTTTGGGTCTGG
rJMSF044E14+          GTTTCAAGGCTCAGAAGGAGTGATGAGAGATGGGTACAAGATGATGCCTTTTGGGTCTGG
                      ____________________________________________________________
consensus             GTTTCAAGGCTCAGAAGGAGTGATGAGAGATGGGTACAAGATGATGCCTTTTGGGTCTGG
 
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rJMSF030I10+          AAGGAGAAGCTGCCCTGGAGAAGCACTGGGGTTGCGTATGGTTGGGCTGTCGTTGGGGTC
rJMSF044E14+          AAGGAGAAGCTGCCCTGGAGAAGCACTGGGGTTGCGTATGGTTGGGCTGTCGTTGGGGTC
                      ____________________________________________________________
consensus             AAGGAGAAGCTGCCCTGGAGAAGCACTGGGGTTGCGTATGGTTGGGCTGTCGTTGGGGTC
 
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rJMSF030I10+          GTTGATCCAATGCTTTGACTGGGAAAGAATCGGCGGTGAGATGGTGGATATGACTGAAGG
rJMSF044E14+          GTTGATCCAATGCTTTGACTGGGAAAGAATCGGCGGTGAGATGGTGGATATGACTGAAGG
                      ____________________________________________________________
consensus             GTTGATCCAATGCTTTGACTGGGAAAGAATCGGCGGTGAGATGGTGGATATGACTGAAGG
 
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rJMSF030I10+          AACTGGGTTAAGCATGCCCAAAGCTACGCCGTTGACGGCCAACTGCAAGCCACGACCTTT
rJMSF044E14+          AACTGGGTTAAGCATGCCCAAAGCTACGCCGTTGACGGCCAACTGCAAGCCACGACCTTT
                      ____________________________________________________________
consensus             AACTGGGTTAAGCATGCCCAAAGCTACGCCGTTGACGGCCAACTGCAAGCCACGACCTTT
 
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rJMSF030I10+          CGTCGCCGGTCTTCTTTCTCCGACGACTTGAAGACTGCATGTTGTGCGAGGATGTCCTTG
rJMSF044E14+          CGTCGCCGGTCTTCTTTCTCCGACGACTTGAAGACTGCATGTTGTGCGAGGATGTCCTTG
                      ____________________________________________________________
consensus             CGTCGCCGGTCTTCTTTCTCCGACGACTTGAAGACTGCATGTTGTGCGAGGATGTCCTTG
 
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rJMSF030I10+          CCAGATCATGAGCAATCTTCCTTATATATTTTTTTTATCCCATATTGTATATTTCTGCTT
rJMSF044E14+          CCAGATCATGAGCAATCTTCCTTATATATTTTTTTTATCCCATATTGTATATTTCTGCTT
                      ____________________________________________________________
consensus             CCAGATCATGAGCAATCTTCCTTATATATTTTTTTTATCCCATATTGTATATTTCTGCTT
 
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rJMSF030I10+          GTCAGTAACTCGTTATGTGCTAGATATGTATGTTCTATACAGAAGAAC            
rJMSF044E14+          GTCAGTAACTCGTTATGTGCTAGATATGTATGTTCTATACAGAAGAACAAGAATGATTTT
                      ____________________________________________________________
consensus             GTCAGTAACTCGTTATGTGCTAGATATGTATGTTCTATACAGAAGAACAAGAATGATTTT