Contig 002964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035L14Sequence653002352 (3)emb|CDP14901.1|1e-64unnamed protein product [Coffea canephora]652002964 (3)ref|XP_009619557.1|2e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF042G05Sequence804002352 (3)emb|CDP14901.1|5e-66unnamed protein product [Coffea canephora]814002964 (3)ref|XP_009619557.1|7e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF043L12Sequence793002352 (3)emb|CDP14901.1|2e-66unnamed protein product [Coffea canephora]767002964 (3)ref|XP_009619557.1|3e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF042G05+                                    TCCGCCACCTCCACNTCCTCCAAGGCAACAGCCN
                      ____________________________________________________________
consensus                                       TCCGCCACCTCCACNTCCTCCAAGGCAACAGCCN
 
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rJMSF042G05+          TTTAGTTCCTGGACCTGCTATAATCCCATCTTTGCAAACTGATATGTTGCCTCCAGGAAT
                      ____________________________________________________________
consensus             TTTAGTTCCTGGACCTGCTATAATCCCATCTTTGCAAACTGATATGTTGCCTCCAGGAAT
 
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rJMSF042G05+          TTCTCGGTTCCCTCCACCTTCACCTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
rJMSF043L12+                       CCACCTTCACNTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
                      ____________________________________________________________
consensus             TTCTCGGTTCCCTCCACCTTCACCTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
 
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rJMSF035L14+                TCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
rJMSF042G05+          CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
rJMSF043L12+          CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
                      ____________________________________________________________
consensus             CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
 
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rJMSF035L14+          ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
rJMSF042G05+          ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
rJMSF043L12+          ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
                      ____________________________________________________________
consensus             ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
 
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rJMSF035L14+          GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
rJMSF042G05+          GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
rJMSF043L12+          GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
                      ____________________________________________________________
consensus             GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
 
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rJMSF035L14+          GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
rJMSF042G05+          GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
rJMSF043L12+          GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
                      ____________________________________________________________
consensus             GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
 
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rJMSF035L14+          GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
rJMSF042G05+          GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
rJMSF043L12+          GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
                      ____________________________________________________________
consensus             GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
 
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rJMSF035L14+          GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
rJMSF042G05+          GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
rJMSF043L12+          GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
                      ____________________________________________________________
consensus             GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
 
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rJMSF035L14+          ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
rJMSF042G05+          ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
rJMSF043L12+          ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
                      ____________________________________________________________
consensus             ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
 
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rJMSF035L14+          TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
rJMSF042G05+          TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
rJMSF043L12+          TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
                      ____________________________________________________________
consensus             TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
 
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rJMSF035L14+          TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
rJMSF042G05+          TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
rJMSF043L12+          TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
                      ____________________________________________________________
consensus             TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
 
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rJMSF035L14+          CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
rJMSF042G05+          CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
rJMSF043L12+          CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
                      ____________________________________________________________
consensus             CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
 
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rJMSF035L14+          TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGAC            
rJMSF042G05+          TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGAC            
rJMSF043L12+          TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGACAGAGTACGAATG
                      ____________________________________________________________
consensus             TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGACAGAGTACGAATG
 
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rJMSF043L12+          TACTACTTCAGATAAAGAATACTTTTGTTTCAGCTTACAAGTTGCCCACTAACTATATAT
                      ____________________________________________________________
consensus             TACTACTTCAGATAAAGAATACTTTTGTTTCAGCTTACAAGTTGCCCACTAACTATATAT