Contig 002962:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043E23+                                                        CCTAGTTGGGGGCC
                      ____________________________________________________________
consensus                                                           CCTAGTTGGGGGCC
 
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rJMSF009A17+                                            AGTCGGCCAGCCAACTAAAAGCCGCC
rJMSF043E23+          AACTAGGCGGAGTTAGGCACCCAACTCGGCGCCTAGTCGGCCAGCCAACTAAAAGCCGCC
                      ____________________________________________________________
consensus             AACTAGGCGGAGTTAGGCACCCAACTCGGCGCCTAGTCGGCCAGCCAACTAAAAGCCGCC
 
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rJMSF009A17+          TAAGGCTGAAATTGCCTCGGCCTAGGGCAATTNTTACAACACTAGGTAACATTACTGGAT
rJMSF043E23+          TAAGGCTGAAATTGCCTCGGCCTAGGGCAATTTTTACAACACTAGGTAACATTACTGGAT
                      ____________________________________________________________
consensus             TAAGGCTGAAATTGCCTCGGCCTAGGGCAATTTTTACAACACTAGGTAACATTACTGGAT
 
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rJMSF009A17+          CAATNTAAAATACTAAAGATGTTACTTTATCCACCATCCAACTCTAATTTTTGTTTCTAC
rJMSF043E23+          CAATCTAAAATACTAAAGATGTTACTTTATCCACCATCCAACTCTAATTTTTGTTTCTAC
                      ____________________________________________________________
consensus             CAATCTAAAATACTAAAGATGTTACTTTATCCACCATCCAACTCTAATTTTTGTTTCTAC
 
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rJMSF009A17+          TAAAGCTGCTNTNCTTGATATTAGTNCCATTTAACTTTTNTGAGNGATTACTGAACTCCC
rJMSF043E23+          TAAAGCTGCTTTACTTGATATTAGTACCATTTAACTTTTCTGAGTGATTACTGAACTCCC
                      ____________________________________________________________
consensus             TAAAGCTGCTTTACTTGATATTAGTACCATTTAACTTTTCTGAGTGATTACTGAACTCCC
 
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rJMSF009A17+          CGTTCGTTCTNTCCCTTGCANGTGAAAGTAAGGAAACACAAGCAAGCAGGGAAATNGATA
rJMSF043E23+          CGTTCGTTCTTTCCCTTGCATGTGAAAGTAAGGAAACACAAGCAAGCAGGGAAATTGATA
                      ____________________________________________________________
consensus             CGTTCGTTCTTTCCCTTGCATGTGAAAGTAAGGAAACACAAGCAAGCAGGGAAATTGATA
 
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rJMSF009A17+          NTGATGTGGTTTTTAGTAGTGCCATCTGCTCACCTAGTTTCCATNGCAAGGAANTATTCT
rJMSF043E23+          ATGATGTGGTTTTTAGTAGTGCCATCTGCTCACCTAGTTTCCATTGCAAGGAATTATTCT
                      ____________________________________________________________
consensus             ATGATGTGGTTTTTAGTAGTGCCATCTGCTCACCTAGTTTCCATTGCAAGGAATTATTCT
 
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rJMSF009A17+          AAAATNTTCTATCCTATATGCCTTCAAATGCTCTCATACACCAATAGAGAAAATAGTAAT
rJMSF043E23+          AAAATTTTCTATCCTATATGCCTTCAAATGCTCTCATACACCAATAGAGAAAATAGTAAT
                      ____________________________________________________________
consensus             AAAATTTTCTATCCTATATGCCTTCAAATGCTCTCATACACCAATAGAGAAAATAGTAAT
 
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rJMSF009A17+          GCAATTTCTCATGCTATTTTCCCCATAATATACCGGTTTACAAGTGGATGTGTCAATGGA
rJMSF043E23+          GCAATTTCTCATGCTATTTTCCCCATAATATACCGGTTTACAAGTGGATGTGTCAATGGA
                      ____________________________________________________________
consensus             GCAATTTCTCATGCTATTTTCCCCATAATATACCGGTTTACAAGTGGATGTGTCAATGGA
 
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rJMSF009A17+          TAANTAATATTTGNGTGATGTTATGTCTGTTTCTTCCAGGAGATGGCATTCGATGAGACA
rJMSF043E23+          TAACTAATATTTGTGTGATTTTATGTCTGTTTCTTCCAGGAGATGGCATTCGATGAGACA
                      ____________________________________________________________
consensus             TAACTAATATTTGTGTGATTTTATGTCTGTTTCTTCCAGGAGATGGCATTCGATGAGACA
 
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rJMSF009A17+          ACTGATCNNGCTTAACATANTCCGGTGTGGGAANCCAACAANGACA              
rJMSF043E23+          ACTGATCTTGCTTAACATATTCCGGTGTTGGAAACCAACAAAGACACAATGATCCTGAAA
                      ____________________________________________________________
consensus             ACTGATCTTGCTTAACATATTCCGGTGTTGGAAACCAACAAAGACACAATGATCCTGAAA
 
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rJMSF043E23+          TACGATGTAAAGTTTCTGTTAATAGTTAAAAAATGTTGCCTTACATAGAACATAAAGTAA
                      ____________________________________________________________
consensus             TACGATGTAAAGTTTCTGTTAATAGTTAAAAAATGTTGCCTTACATAGAACATAAAGTAA