Contig 002957:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041L22+                                              GAGCTACTTAATATTACTGAGTAT
                      ____________________________________________________________
consensus                                                 GAGCTACTTAATATTACTGAGTAT
 
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rJMSF041L22+          GTGGGACCCATAAATGATGTAGCAGGAAGAGCTAGAGTCTTCTTGGTCCTTCCTGATGCA
                      ____________________________________________________________
consensus             GTGGGACCCATAAATGATGTAGCAGGAAGAGCTAGAGTCTTCTTGGTCCTTCCTGATGCA
 
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rJMSF047E05+                                                                     A
rJMSF041L22+          TTCTNGGATGCATTTTTGATCTTGTGGGTTTTCACTTCTCTTTCAAGGACACTCGAGCAA
                      ____________________________________________________________
consensus             TTCTNGGATGCATTTTTGATCTTGTGGGTTTTCACTTCTCTTTCAAGGACACTCGAGCAA
 
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rJMSF047E05+          TTACAGGCAAAGAGAAGTTCCGNGAAGTTAGATTTNTATAGGCAATTTTCAAATNCATTN
rJMSF041L22+          TTACAGGCAAAGAGAAGTTCCGTGAAGTTAGATTTATATAGGCAATTTTCAAATGCATTA
                      ____________________________________________________________
consensus             TTACAGGCAAAGAGAAGTTCCGTGAAGTTAGATTTATATAGGCAATTTTCAAATGCATTA
 
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rJMSF047E05+          GCAGNTACTATTATTGCTTCAGTTGCTTGGATAGGGTATGAGGTTTANTTCAAAGCGACA
rJMSF041L22+          GCAGTTACTATTATTGCTTCAGTTGCTTGGATAGGGTATGAGGTTTACTTCAAAGCGACA
                      ____________________________________________________________
consensus             GCAGTTACTATTATTGCTTCAGTTGCTTGGATAGGGTATGAGGTTTACTTCAAAGCGACA
 
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rJMSF047E05+          GATCCCTTCAATGAGAGGTGGCAAAGTGGATGGATTATCACTGCNTTCTGGGACATTCTT
rJMSF041L22+          GATCCCTTCAATGAGGGGTGGCAAAGTGGATGGATTATCACTGCTTTCTGGGACATTCTT
                      ____________________________________________________________
consensus             GATCCCTTCAATGAGGGGTGGCAAAGTGGATGGATTATCACTGCTTTCTGGGACATTCTT
 
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rJMSF047E05+          GCATTTGCACTGCTANGTGTCATCTGTNTCNTATGGGCNCCATCTCAGAGCTCCCAAAGG
rJMSF041L22+          GCATTTGCACTGCTATGTGTCATCTGTTTCCTATGGGCACCATCTCAGAGCTCCCAAAGG
                      ____________________________________________________________
consensus             GCATTTGCACTGCTATGTGTCATCTGTTTCCTATGGGCACCATCTCAGAGCTCCCAAAGG
 
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rJMSF047E05+          TNTGCCTACTCAGATNGGAAAGGTGAAGATAGTGATGNCGAAGAANCAGAATCCTNNTGC
rJMSF041L22+          TATGCCTACTCAGATGGGAAAGGTGAAGATAGTGATGACGAAGAAACAGAATCCTTTTGC
                      ____________________________________________________________
consensus             TATGCCTACTCAGATGGGAAAGGTGAAGATAGTGATGACGAAGAAACAGAATCCTTTTGC
 
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rJMSF047E05+          AAAGAGAGCCCGAGAGGTGATATCAGTTTAGTCAAAATGGAGAGGAAGGAAGGGATGGAA
rJMSF041L22+          AAAGAGAGCCCGAGAGGTGATATCAGTTTAGTCAAAATGGAGAGGAAGGAAGGGATGGAA
                      ____________________________________________________________
consensus             AAAGAGAGCCCGAGAGGTGATATCAGTTTAGTCAAAATGGAGAGGAAGGAAGGGATGGAA
 
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rJMSF047E05+          ACGTCTGACGGAGAAGATGAACCAGAAGATGGTAAGAGGGAATGAGTGCATAAAAGATTT
rJMSF041L22+          ACGTCTGACGGAGAAGATGAACCAGAAGATGGTAAGAGGGAATGAGTGCATAAAAGATTT
                      ____________________________________________________________
consensus             ACGTCTGACGGAGAAGATGAACCAGAAGATGGTAAGAGGGAATGAGTGCATAAAAGATTT
 
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rJMSF047E05+          GTAAGCTTTTTCTTAAGCACGGAGTCTNAAGCCAGTGCACGTCGAATGGTCAGCGCTATG
rJMSF041L22+          GTAAGCTTTTTCTTAAGCACGGAGTCTGAAGCCAGTGCACGTCGAATGGTCAGCGCTATG
                      ____________________________________________________________
consensus             GTAAGCTTTTTCTTAAGCACGGAGTCTGAAGCCAGTGCACGTCGAATGGTCAGCGCTATG
 
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rJMSF047E05+          TGTGCTCTTGCAAATACTCCNCACTGCACAATTGGATTTTAAACATTGTAAATGTCAAAA
rJMSF041L22+          TGTGCTCTTGCAAATACTCCTCACTGCACAATTGGATTTTAAACATTGTAAATGTCAAAA
                      ____________________________________________________________
consensus             TGTGCTCTTGCAAATACTCCTCACTGCACAATTGGATTTTAAACATTGTAAATGTCAAAA
 
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rJMSF047E05+          AGGTAGCGTTGCACAGGTCATGAAACTTTGGAGGTGAGAATTGTTGAAACAAGTATTGTA
rJMSF041L22+          AGGTAGCGTTGCACAGGTCATGAAATTTTGGAGGTGAGAATTGTTGAAACAAGTATTGTA
                      ____________________________________________________________
consensus             AGGTAGCGTTGCACAGGTCATGAAATTTTGGAGGTGAGAATTGTTGAAACAAGTATTGTA
 
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rJMSF047E05+          CTAAGGTTTNACAGTNTTCCTTCTAAAGCAT                             
rJMSF041L22+          TTAAGGTTTTACAGTTTTCCTTTTAAAGCATACAATGTTACTTGGGGACATGAAAAGTAA
                      ____________________________________________________________
consensus             TTAAGGTTTTACAGTTTTCCTTTTAAAGCATACAATGTTACTTGGGGACATGAAAAGTAA