Contig 002955:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039O14Sequence704002955 (2)ref|XP_009610876.1|6e-110PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820
JMSF041G14Sequence533013506 (6)609002955 (2)ref|XP_011075242.1|9e-67PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820

Alignment

This contig is upended


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rJMFF039O14+                                                            CAACAAGACT
                      ____________________________________________________________
consensus                                                               CAACAAGACT
 
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rJMFF039O14+          CTCTATTGCCATTGGCGTGGCTGAAGGGTTGGCTTTCCTTCATCACGTTGCCATTATTCA
                      ____________________________________________________________
consensus             CTCTATTGCCATTGGCGTGGCTGAAGGGTTGGCTTTCCTTCATCACGTTGCCATTATTCA
 
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rJMFF039O14+          CNTGGATATTTCTTCGGGAAATGTACTTGTGGATTCCAACTTCCGGCCCTTAGTTGGTGA
rJMSF041G14+                                                           TTAGTTGGTGA
                      ____________________________________________________________
consensus             CNTGGATATTTCTTCGGGAAATGTACTTGTGGATTCCAACTTCCGGCCCTTAGTTGGTGA
 
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rJMFF039O14+          AGTCGAAATATCTAGGCTTCTTGACCCATCCAGAGGAACTGCAAGCATCAGTGCTGTTGC
rJMSF041G14+          AGTCGAAATATCTAGGCTTCTTGACCCATCCAGAGGAACTGCAAGCATCAGTGCTGTTGC
                      ____________________________________________________________
consensus             AGTCGAAATATCTAGGCTTCTTGACCCATCCAGAGGAACTGCAAGCATCAGTGCTGTTGC
 
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rJMFF039O14+          TGGATCATTTGGTTATATTCCCCCAGAATATGCATACACAATGCAAGTGACAGCTCCAGG
rJMSF041G14+          TGGATCATTTGGTTATATTCCCCCAGA--ATGCATACACAATGCAAGTGACAGCTCCAGG
                      ____________________________________________________________
consensus             TGGATCATTTGGTTATATTCCCCCAGAATATGCATACACAATGCAAGTGACAGCTCCAGG
 
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rJMFF039O14+          AAATGTTTACAGCTTCGGGGTTGTCTTGCTCGAGATCCTCACAGCCAGACTGCCTGTGGA
rJMSF041G14+          AAATGTTTACAGCTTCGGGGTTGTCTTGCTCGAGATCCTCACAGCCAGACTGCCTGTGGA
                      ____________________________________________________________
consensus             AAATGTTTACAGCTTCGGGGTTGTCTTGCTCGAGATCCTCACAGCCAGACTGCCTGTGGA
 
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rJMFF039O14+          TGAAGCGTTTGGCGAAGGAATAGATTTGGTGAAGTGGGTCCATGGTGCACCTGCAAGAGG
rJMSF041G14+          TGAAGCGTTTGGCGAAGGAATAGATTTGGTGAAGTGGGTCCATGGTGCACCTGCAAGAGG
                      ____________________________________________________________
consensus             TGAAGCGTTTGGCGAAGGAATAGATTTGGTGAAGTGGGTCCATGGTGCACCTGCAAGAGG
 
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rJMFF039O14+          GGAAACACCTGAGCAGATACTTGATGCTAGACTGAGCACTGTTTCGTTTGCTTGGAGGAA
rJMSF041G14+          GGAAACACCTGAGCAGATACTTGATGCTAGACTGAGCACTGTTTCGTTTGCTTGGAGGAA
                      ____________________________________________________________
consensus             GGAAACACCTGAGCAGATACTTGATGCTAGACTGAGCACTGTTTCGTTTGCTTGGAGGAA
 
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rJMFF039O14+          AGAAATGCTTGCAGCTTTGAAAGTTGCATTGATCTGCACAGACACCACACCGGCTAAACG
rJMSF041G14+          AGAAATGCTTGCAGCTTTGAAAGTTGCATTGATCTGCACAGACACCACACCGGCTAAACG
                      ____________________________________________________________
consensus             AGAAATGCTTGCAGCTTTGAAAGTTGCATTGATCTGCACAGACACCACACCGGCTAAACG
 
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rJMFF039O14+          GCCCAAGATGAAGAAGGTTATTGAAATGCTTAGAGAAATTACAGAGAATTGAA       
rJMSF041G14+          GCCCAAGATGAAGAAGGTTATTGAAATGCTTAGAGAAATTACAGAGAATTGAACCAGTCT
                      ____________________________________________________________
consensus             GCCCAAGATGAAGAAGGTTATTGAAATGCTTAGAGAAATTACAGAGAATTGAACCAGTCT
 
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rJMSF041G14+          TTTATCATCATCATCTCTGCTATTCTTGATCTCAATCCTGGGGATTTTTGAATCTCCATT
                      ____________________________________________________________
consensus             TTTATCATCATCATCTCTGCTATTCTTGATCTCAATCCTGGGGATTTTTGAATCTCCATT
 
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rJMSF041G14+          GGTGGTCACAAAATTTGCTCAGTCTCAGGTGAGAAGAAGCAAATGCTGATGAAAATCTGT
                      ____________________________________________________________
consensus             GGTGGTCACAAAATTTGCTCAGTCTCAGGTGAGAAGAAGCAAATGCTGATGAAAATCTGT
 
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rJMSF041G14+          ACATGTCAGGGTTTAAGCTTTTCTGCCTGTTATTATGATAATCTATTTGCCGCCCTGTCT
                      ____________________________________________________________
consensus             ACATGTCAGGGTTTAAGCTTTTCTGCCTGTTATTATGATAATCTATTTGCCGCCCTGTCT