Contig 002954:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041M14Sequence655002954 (3)ref|XP_009767118.1|4e-140PREDICTED: thioredoxin reductase NTRC [Nicotiana sylvestris]
JMSF025K09Sequence659003695 (2)ref|XP_006351311.1|4e-56PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Solanum tuberosum]758002954 (3)gb|KJB19247.1|6e-107hypothetical protein B456_003G091100 [Gossypium raimondii]
JMSF041G01Sequence827003695 (2)ref|XP_004249259.1|2e-80PREDICTED: thioredoxin reductase NTRC [Solanum lycopersicum]704002954 (3)gb|KJB19247.1|4e-124hypothetical protein B456_003G091100 [Gossypium raimondii]

Alignment

This contig is upended


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JMFN041M14-                                    CCAAACATCACCGTGCATTTCAACACAGAGACTGT
                      ____________________________________________________________
consensus                                      CCAAACATCACCGTGCATTTCAACACAGAGACTGT
 
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JMFN041M14-           GGATGTTGTTAGCAACCAGAAAGGGCAGATGTCAGGGATTTTGGTCAGGAGACTAGACAC
                      ____________________________________________________________
consensus             GGATGTTGTTAGCAACCAGAAAGGGCAGATGTCAGGGATTTTGGTCAGGAGACTAGACAC
 
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JMFN041M14-           TCAAGAGGAATCTGTGCTAGAGGCAAAGGGGTTATTTTATGGGATAGGTCATTCTCCAAA
rJMSF025K09+                                      GGGTTATTTTATGGGATAGGTCATTCTCCAAA
                      ____________________________________________________________
consensus             TCAAGAGGAATCTGTGCTAGAGGCAAAGGGGTTATTTTATGGGATAGGTCATTCTCCAAA
 
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JMFN041M14-           TAGTCAGCTCTTGGAAGGGCAAATCGAACTTGATAGCTTAGGCTATATATTGGTTGAGCA
rJMSF025K09+          TAGTCAGCTCTTGGAAGGGCAAATCGAACTTGATAGCTTAGGCTATATATTGGTTGAGCA
rJMSF041G01+                          GGGCAAATCGAACTTGATAGCTTAGGCTATATATTGGTTGAGCA
                      ____________________________________________________________
consensus             TAGTCAGCTCTTGGAAGGGCAAATCGAACTTGATAGCTTAGGCTATATATTGGTTGAGCA
 
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JMFN041M14-           TGGCACAGCAAAAACCTCTGCTGAAGGTGTCTTTGCGGCTGGAGATGTACAGGACCATGA
rJMSF025K09+          TGGCACAGCAAAAACCTCTGCTGAAGGTGTCTTTGCGGCTGGAGATGTACAGGACCATGA
rJMSF041G01+          TGGCACAGCAAAAACNTCTGCTGAAGGTGTCTTTGCGGCTGGAGATGTACAGGACCATGA
                      ____________________________________________________________
consensus             TGGCACAGCAAAAACCTCTGCTGAAGGTGTCTTTGCGGCTGGAGATGTACAGGACCATGA
 
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JMFN041M14-           ATGGAGGCAAGCCATTACTGCAGCTGGATCAGGGTGTGTTGCTGCTCTATCTGTTGAGAG
rJMSF025K09+          ATGGAGGCAAGCCATTACTGCAGCTGGATCAGGGTGTGTTGCTGCTCTATCTGTTGAGAG
rJMSF041G01+          ATGGAGGCAAGCCATTACTGCAGCTGGATCAGGGTGTGTTGCTGCTCTATCTGTTGAGAG
                      ____________________________________________________________
consensus             ATGGAGGCAAGCCATTACTGCAGCTGGATCAGGGTGTGTTGCTGCTCTATCTGTTGAGAG
 
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JMFN041M14-           ATATCTTACAAGCAAAGATCTGCTTGTTGAATTCCACCAGAAACCAACTGAAGAGGCTAA
rJMSF025K09+          ATATCTTACAAGCAAAGATCTGCTTGTTGAATTCCACCAGAAACCAACTGAAGAGGCTAA
rJMSF041G01+          ATATCTTACAAGCAAAGATCTGCTTGTTGAATTCCACCAGAAACCAACTGAAGAGGCTAA
                      ____________________________________________________________
consensus             ATATCTTACAAGCAAAGATCTGCTTGTTGAATTCCACCAGAAACCAACTGAAGAGGCTAA
 
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JMFN041M14-           AAAGGAGCTCACAGATAGAGATGTACAAGAAGGTTTTGATATCACACTTACAAAACACAA
rJMSF025K09+          AAAGGAGCTCACAGATAGAGATGTACAAGAAGGTTTTGATATCACACTTACAAAACACAA
rJMSF041G01+          AAAGGAGCTCACAGATAGAGATGTACAAGAAGGTTTTGATATCACACTTACAAAACACAA
                      ____________________________________________________________
consensus             AAAGGAGCTCACAGATAGAGATGTACAAGAAGGTTTTGATATCACACTTACAAAACACAA
 
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JMFN041M14-           GGGACAGTATGCCTTAAGGAAGCTGTATCATGAGAGCCCAAGAATTGTATGTGTACTGTA
rJMSF025K09+          GGGACAGTATGCCTTAAGGAAGCTGTATCATGAGAGCCCAAGAATTGTATGTGTACTGTA
rJMSF041G01+          GGGACAGTATGCCTTAAGGAAGCTGTATCATGAGAGCCCAAGAATTGTATGTGTACTGTA
                      ____________________________________________________________
consensus             GGGACAGTATGCCTTAAGGAAGCTGTATCATGAGAGCCCAAGAATTGTATGTGTACTGTA
 
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JMFN041M14-           TACTGCACCAACTTGTGGTCCATGTCGGACCTTGAAACCTATACTCAGCAAGGTTATAGA
rJMSF025K09+          TACTGCACCAACTTGTGGTCCATGTCGGACCTTGAAACCTATACTCAGCAAGGTTATAGA
rJMSF041G01+          TACTGCACCAACTTGTGGTCCATGTCGGACCTTGAAACCTATACTCAGCAAGGTTATAGA
                      ____________________________________________________________
consensus             TACTGCACCAACTTGTGGTCCATGTCGGACCTTGAAACCTATACTCAGCAAGGTTATAGA
 
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JMFN041M14-           TGAATTTGACGAGAGCGTCCATTTTGTTGAGATTGACATTACTGAAGACCCAGAGATTGC
rJMSF025K09+          TGAATTTGACGAGAGCGTCCATTTTGTTGAGATTGACATTACTGAAGACCCAGAGATTGC
rJMSF041G01+          TGAATTTGACGAGAGCGTCCATTTTGTTGAGATTGACATTACTGAAGACCCAGAGATTGC
                      ____________________________________________________________
consensus             TGAATTTGACGAGAGCGTCCATTTTGTTGAGATTGACATTACTGAAGACCCAGAGATTGC
 
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JMFN041M14-           C                                                           
rJMSF025K09+          C-AGGCAGCTGGAATCATGGGTACACCATGTGTACAGTTCTTCAAAAATAAGGAAATGCT
rJMSF041G01+          CGAGGCAGCTGGAATCATGGGTACACCATGTGTACAGTTCTTCAAAAATAAGGAAATGCT
                      ____________________________________________________________
consensus             CGAGGCAGCTGGAATCATGGGTACACCATGTGTACAGTTCTTCAAAAATAAGGAAATGCT
 
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rJMSF025K09+          CAAGATAGTACCAGGGGTAAAGATGAAGAGAGAATACAGGGAATTCATTGAAGCTAATAA
rJMSF041G01+          CAAGATAGTACCAGGGGTAAAGATGAAGAGAGAATACAGGGAATTCATTGAAGCTAATAA
                      ____________________________________________________________
consensus             CAAGATAGTACCAGGGGTAAAGATGAAGAGAGAATACAGGGAATTCATTGAAGCTAATAA
 
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rJMSF025K09+          ATAAGGAACTCTAATAATTCTTTCATCATATTATTATATGATATGATGTTGTTTCCGTTT
rJMSF041G01+          ATAAGGAACTCTAATAATTCTTTCATCATATTATTATATGATATGATGTTGTTTCCGTTT
                      ____________________________________________________________
consensus             ATAAGGAACTCTAATAATTCTTTCATCATATTATTATATGATATGATGTTGTTTCCGTTT
 
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rJMSF025K09+          ATCATGTAAAATGCCTTTGTTCTTCTTCTTCCTCTTCTTCTTCACTAAAGTTTT      
rJMSF041G01+          ATCATGTAAAATGCCTTTGTTCTTCTTCTTCCTCTTCTTCTTCACTAAAGTTTTGATATT
                      ____________________________________________________________
consensus             ATCATGTAAAATGCCTTTGTTCTTCTTCTTCCTCTTCTTCTTCACTAAAGTTTTGATATT