Contig 002951:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040E03+                   ACAACAGAAGCTCTACTGTATGTCNGTATAAACGCATAAAACTTTTATTTG
                      ____________________________________________________________
consensus                      ACAACAGAAGCTCTACTGTATGTCNGTATAAACGCATAAAACTTTTATTTG
 
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rJMSF040E03+          CCTGTAAAGGAAGTAAATATCAGGTGTTTACCCTTTGTCTCTCCTATGGCCTCATGTTGT
                      ____________________________________________________________
consensus             CCTGTAAAGGAAGTAAATATCAGGTGTTTACCCTTTGTCTCTCCTATGGCCTCATGTTGT
 
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rJMSF040E03+          TTATAAGTATGATCTTACATGCTTGGTCTTATCCTTCTTTTTAATTTCATAAGTACGTCT
                      ____________________________________________________________
consensus             TTATAAGTATGATCTTACATGCTTGGTCTTATCCTTCTTTTTAATTTCATAAGTACGTCT
 
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rJMSF052A08+                                                                  TTTG
rJMSF040E03+          AGTTTTATCTATTGTGTGGACAATCTTCTGAATTCATATACAACCACCGAGCAATTTTTG
                      ____________________________________________________________
consensus             AGTTTTATCTATTGTGTGGACAATCTTCTGAATTCATATACAACCACCGAGCAATTTTTG
 
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rJMSF052A08+          TAGGGTAGTGGATCAGCAACCCAAAATGAATTTTCATATATGTCATGGAATAGAAAGGTT
rJMSF040E03+          TAGGGTAGTGGATCAGCAACCCAAAATGAATTTTCATATATGTCATGGAATAGAAAGGTT
                      ____________________________________________________________
consensus             TAGGGTAGTGGATCAGCAACCCAAAATGAATTTTCATATATGTCATGGAATAGAAAGGTT
 
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rJMSF052A08+          CAACAGATATTGGCGTCCACATCATCAAATGGCACAACTGGTCAGCAAGAAGTCAGCTGA
rJMSF040E03+          CAACAGATATTGGCGTCCACATCATCAAATGGCACAACTGGTCAGCAAGAAGTCAGCTGA
                      ____________________________________________________________
consensus             CAACAGATATTGGCGTCCACATCATCAAATGGCACAACTGGTCAGCAAGAAGTCAGCTGA
 
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rJMSF052A08+          AGGATGCACTAGTCTCCATTTGAAGTTTGAAAAAATTGCCTTTTAATCTTAAAATTTTAT
rJMSF040E03+          AGGATGCACTAGTCTCCATTTGAAGTTTGAAAAAATTGCCTTTTAATCTTAAAATTTTAT
                      ____________________________________________________________
consensus             AGGATGCACTAGTCTCCATTTGAAGTTTGAAAAAATTGCCTTTTAATCTTAAAATTTTAT
 
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rJMSF052A08+          TTTCCTTTTCTATTTCTCTAGTGGTTTGGGATCTGAGGAATCAAAAACCTGTGATAAGGT
rJMSF040E03+          TTTCCTTTTCTATTTCTCTAGTAGTTTGGGATCTGAGGAATCAAAAACCTGTGATAAGGT
                      ____________________________________________________________
consensus             TTTCCTTTTCTATTTCTCTAGTGGTTTGGGATCTGAGGAATCAAAAACCTGTGATAAGGT
 
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rJMSF052A08+          ATGCCTTATCCTAAAATTGGCGCGTTGTTTTGTTCTTTCCATTATTTGATCTCAAATTAT
rJMSF040E03+          ATGCCTTATCCTAAAATTGGCGCGTTGTTTTGTTCTTTCCATTATTTGATCTCAAATTAT
                      ____________________________________________________________
consensus             ATGCCTTATCCTAAAATTGGCGCGTTGTTTTGTTCTTTCCATTATTTGATCTCAAATTAT
 
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rJMSF052A08+          AACCTACTTTAAAGGGTAAACTTGCAGTTTCTCAGATTCTCAAATTCTATTAGAATCCTG
rJMSF040E03+          AACCTACTTTAAAGGGTAAACTTGCAGTTTCTCAGATTCTCAAATTCTATTAGAATCCTG
                      ____________________________________________________________
consensus             AACCTACTTTAAAGGGTAAACTTGCAGTTTCTCAGATTCTCAAATTCTATTAGAATCCTG
 
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rJMSF052A08+          ATGTTGCCACTCAACTTGTAGTTGCCTCTGATGAAGATACTTCACATGCATTGAGGATGT
rJMSF040E03+          ATGTTGCCACTCAACTTGTAGTTGCCTCTGATGAAGATACTTCACATGCATTGAGGATGT
                      ____________________________________________________________
consensus             ATGTTGCCACTCAACTTGTAGTTGCCTCTGATGAAGATACTTCACATGCATTGAGGATGT
 
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rJMSF052A08+          GGGATATGCGAAATACAATGTCTCCAGTGAAAGAGCTTACGGGGCATACCAAAGAGAGTG
rJMSF040E03+          GGGATATGCGAAATACAATGTCTCCAGTGAAAGAGCTTACGGGGCATACCAAAGAGAGTG
                      ____________________________________________________________
consensus             GGGATATGCGAAATACAATGTCTCCAGTGAAAGAGCTTACGGGGCATACCAAAGAGAGTG
 
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rJMSF052A08+          AAGCTCTGTGAAGATGTGATTATTTAGCATCTCTAATGTTTATTTTTTTGAAAAGCATTT
rJMSF040E03+          AAGCTCTGTGAAGATGTGATTATTTAGCATCTCTAATGTTTATTTTTTTGAAAAGCATTT
                      ____________________________________________________________
consensus             AAGCTCTGTGAAGATGTGATTATTTAGCATCTCTAATGTTTATTTTTTTGAAAAGCATTT
 
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rJMSF052A08+          CTAATGTATAACCAAGAATTTGGTGCATTTAGAGAACTGCTTCTCCAATTCCATCTTGTT
rJMSF040E03+          CTAATGTATAACCAAGAATTTGGTGCATTTAGAGAACTGCTTCTCCAATTCCATCTTGTT
                      ____________________________________________________________
consensus             CTAATGTATAACCAAGAATTTGGTGCATTTAGAGAACTGCTTCTCCAATTCCATCTTGTT
 
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rJMSF052A08+          GAGTTGGTTGAATTTGATTCTTTATAGTCTTTACAAAGTTGTATGAAATATTTC      
rJMSF040E03+          GAGTTGGTTGAATTTGATTCTTTATAGTCTTTACAAAGTTGTATGAAATATTTCCATTTT
                      ____________________________________________________________
consensus             GAGTTGGTTGAATTTGATTCTTTATAGTCTTTACAAAGTTGTATGAAATATTTCCATTTT