Contig 002950:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040B12+                                                   AAAGCTTGCATCGTTGAAG
                      ____________________________________________________________
consensus                                                      AAAGCTTGCATCGTTGAAG
 
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rJMSF034O01+                           ATTAAGTGATCTGATTCGAATGGAGGTTGCAATGGCAGGTTAC
rJMSF040B12+          CCCCTCCCACTTAGTCAATTAAGTGATCTGATTCGAATGGAGGTTGCAATGGCAGGTTAC
                      ____________________________________________________________
consensus             CCCCTCCCACTTAGTCAATTAAGTGATCTGATTCGAATGGAGGTTGCAATGGCAGGTTAC
 
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rJMSF034O01+          ACAGAGGTGTTGACATGGATATTGTGTTCTAAAAAAGAAATTGCCTCCCTGCTGAAGCAT
rJMSF040B12+          ACAGAGGTGTTGACATGGATATTGTGTTCTAAAAAAGAAATTGCCTCCCTGCTGAAGCAT
                      ____________________________________________________________
consensus             ACAGAGGTGTTGACATGGATATTGTGTTCTAAAAAAGAAATTGCCTCCCTGCTGAAGCAT
 
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rJMSF034O01+          GGAGAAGATAATTCGGCAGTTGTAATTGCCGATTCTCGTACTTCTGAGTTTGAGGTTGTG
rJMSF040B12+          GGAGAAGATAATTCGGCAGTTGTAATTGCCGATTCTCGTACTTCTGAGTTTGAGGTTGTG
                      ____________________________________________________________
consensus             GGAGAAGATAATTCGGCAGTTGTAATTGCCGATTCTCGTACTTCTGAGTTTGAGGTTGTG
 
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rJMSF034O01+          CGGACACGTCTAATGCCAGGCATATTGAAAACTGTTGGACACAATAAAGACCATCCGAAA
rJMSF040B12+          CGGACACGTCTAATGCCAGGCATATTGAAAACTGTTGGACACAATAAAGACCATCCGAAA
                      ____________________________________________________________
consensus             CGGACACGTCTAATGCCAGGCATATTGAAAACTGTTGGACACAATAAAGACCATCCGAAA
 
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rJMSF034O01+          CCTATAAAGATATTTGAAGTAGGGGATGTAGTCTTCTTGGACAACACTAAGGATGTTGGT
rJMSF040B12+          CCTATAAAGATATTTGAAGTAGGGGATGTAGTCTTCTTGGACAACACTAAGGATGTTGGT
                      ____________________________________________________________
consensus             CCTATAAAGATATTTGAAGTAGGGGATGTAGTCTTCTTGGACAACACTAAGGATGTTGGT
 
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rJMSF034O01+          GCAATTAATCGTCGTCACCTTGCTGCTCTGTATTGCGGTGCCAACTCAGGATTTGAGCTA
rJMSF040B12+          GCAATTAATCGTCGTCACCTTGCTGCTCTGTATTGCGGTGCCAACTCAGGATTTGAGCTA
                      ____________________________________________________________
consensus             GCAATTAATCGTCGTCACCTTGCTGCTCTGTATTGCGGTGCCAACTCAGGATTTGAGCTA
 
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rJMSF034O01+          ATACATGGTCTAGTTGATAGAATAATGGAAGTGACTGCAACTCCATTTGTAACACCTGGC
rJMSF040B12+          ATACATGGTCTAGTTGATAGAATAATGGAAGTGACTGCAACTCCATTTGTAACACCTGGC
                      ____________________________________________________________
consensus             ATACATGGTCTAGTTGATAGAATAATGGAAGTGACTGCAACTCCATTTGTAACACCTGGC
 
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rJMSF034O01+          AATACTTCAGGCTACTACATAGAAAGTTCAGATGAGCCTGAGCTTCTTCAAGGAAGACAA
rJMSF040B12+          AATACTTCAGGCTACTACATAGAAAGTTCAGATGAGCCTGAGCTTCTTCAAGGAAGACAA
                      ____________________________________________________________
consensus             AATACTTCAGGCTACTACATAGAAAGTTCAGATGAGCCTGAGCTTCTTCAAGGAAGACAA
 
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rJMSF034O01+          GCAAGAGTCATTTGCAGAGGAAAGCACATTGGTAACTTTGGCATTGTGCACCCCGAGGTC
rJMSF040B12+          GCAAGAGTCATTTGCAGAGGAAAGCACATTGGTAACTTTGGCATTGTGCACCCCGAGGTC
                      ____________________________________________________________
consensus             GCAAGAGTCATTTGCAGAGGAAAGCACATTGGTAACTTTGGCATTGTGCACCCCGAGGTC
 
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rJMSF034O01+          CTTGCAAACTTCGACATTCCAGACCCTTGTTCGTTTGTTGAGCTCGACTTGGAGAAGCTC
rJMSF040B12+          CTTGCAAACTTCGACATTCCAGACCCTTGTTCGTTTGTTGAGCTCGACTTGGAGAAGCTC
                      ____________________________________________________________
consensus             CTTGCAAACTTCGACATTCCAGACCCTTGTTCGTTTGTTGAGCTCGACTTGGAGAAGCTC
 
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rJMSF034O01+          TTATAGTTTTACATCACATCACAATGTACTCTGCACTGCCTTCTCTTCGGTACTGATTAG
rJMSF040B12+          TTATAGTTTTACATCACATCACAATGTACTCTGCACTGCCTTCTCTTCGGTACTGATTAG
                      ____________________________________________________________
consensus             TTATAGTTTTACATCACATCACAATGTACTCTGCACTGCCTTCTCTTCGGTACTGATTAG
 
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rJMSF034O01+          CGTACTTCTTATAATTCGCTTCTGCACCCTTAATGAGTATTGTATATCAAACTTCATTAG
rJMSF040B12+          CGTACTTCTTATAATTCGCTTCTGCACCCTTAATGAGTATTGTATATCAAACTTCATTAG
                      ____________________________________________________________
consensus             CGTACTTCTTATAATTCGCTTCTGCACCCTTAATGAGTATTGTATATCAAACTTCATTAG
 
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rJMSF034O01+          CTATATAACTTAAACTGATTGCTTTCATTGTTTTCGACTC                    
rJMSF040B12+          CTATATAACTTAAACTGATTGCTTTCATTGTTTTCGACTCTAAATACTCAATTTTCAAAG
                      ____________________________________________________________
consensus             CTATATAACTTAAACTGATTGCTTTCATTGTTTTCGACTCTAAATACTCAATTTTCAAAG