Contig 002949:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040A22-                                    CAATTTGATCATGGTCCGGTGAAATTGTTACACC
                      ____________________________________________________________
consensus                                       CAATTTGATCATGGTCCGGTGAAATTGTTACACC
 
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JMFN038A16+                                                    ACTCCATTAACCAANCTCC
rJMSF040A22-          AAACAACAATATATGACTTTCATTCACATTCTTTGTTTCGAACTCCATTAACCAAACTCC
                      ____________________________________________________________
consensus             AAACAACAATATATGACTTTCATTCACATTCTTTGTTTCGAACTCCATTAACCAAACTCC
 
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JMFN038A16+           ATGTACTACATTCCACTTAAAAAGAATACAGATGTGAGAATCAAAATTATTGNTTGAGAA
rJMSF040A22-          ATGTACTACATTCCACTTAAAAAGAATACAGATGTGAGAATCAAAATTATTTGTTGAGAA
                      ____________________________________________________________
consensus             ATGTACTACATTCCACTTAAAAAGAATACAGATGTGAGAATCAAAATTATTTGTTGAGAA
 
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JMFN038A16+           GAATGAAACAAGAGAATTCTCATTTCTCAACACGAAGCTGAACCACTTGACAAAACTTCG
rJMSF040A22-          GAATGAAACAAGAGAATTCTCATTTCTCAACACGAAGCTGAACCACTTGACAAAACTTCG
                      ____________________________________________________________
consensus             GAATGAAACAAGAGAATTCTCATTTCTCAACACGAAGCTGAACCACTTGACAAAACTTCG
 
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JMFN038A16+           CTACTGCCATCATCATCTTCACCAAAGCGATAGTTCTCATGTACTTGAAGCAAAAGTTCC
rJMSF040A22-          CTACTGCCATCATCATCTTCACCAAAGCGATAGTTCTCATGTACTTGAAGCAAAAGTTCC
                      ____________________________________________________________
consensus             CTACTGCCATCATCATCTTCACCAAAGCGATAGTTCTCATGTACTTGAAGCAAAAGTTCC
 
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JMFN038A16+           CGACAAGGTACAACTGCACCAAGCTTGATGCAAGCAAGGAAAGCGCCCGATAGCTTTCGG
rJMSF040A22-          CGACAAGGTACAACTGCACCAAGCTTGATGCAAGCAAGGAAAGCGCCCGATAGCTTTCGG
                      ____________________________________________________________
consensus             CGACAAGGTACAACTGCACCAAGCTTGATGCAAGCAAGGAAAGCGCCCGATAGCTTTCGG
 
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JMFN038A16+           TGGAGACTATATGCTTCCTCTGGGGGAGGTGTTAGCCTGTGCCTCAGCATAGTAGCCCCG
rJMSF040A22-          TGGAGACTATATGCTTCCTCTGGGGGAGGTGTTAGCCTGTGCCTCAGCATAGTAGCCCCG
                      ____________________________________________________________
consensus             TGGAGACTATATGCTTCCTCTGGGGGAGGTGTTAGCCTGTGCCTCAGCATAGTAGCCCCG
 
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JMFN038A16+           AGATTTGAAATGCTTTGTATTATATTGTTAGATCGAAAATCATAGCCTCCCATCTTTGAA
rJMSF040A22-          AGATTTGAAATGCTTTGTATTATATTGTTAGATCGAAAATCATAGCCTCCCATCTTTGAA
                      ____________________________________________________________
consensus             AGATTTGAAATGCTTTGTATTATATTGTTAGATCGAAAATCATAGCCTCCCATCTTTGAA
 
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JMFN038A16+           AATGGCAATCCTACAACAAAACCGGCCTGCACGTGTGTATCTATCATTACATCCGACTCT
rJMSF040A22-          AATGGCAATCCTACAACAAAACCGGCCTGCACGTGTGTATCTATCATTACATCCGACTCT
                      ____________________________________________________________
consensus             AATGGCAATCCTACAACAAAACCGGCCTGCACGTGTGTATCTATCATTACATCCGACTCT
 
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JMFN038A16+           TCCCCTGTCAGAAACCCAAGCCTCTTCGACATCTCAATCACAGCTTCACGATCGCTGTTT
rJMSF040A22-          TCCCCTGTCAGAAACCCAAGCCTCTTCGACATCTCAATCACAGCTTCACGATCGCTGTTT
                      ____________________________________________________________
consensus             TCCCCTGTCAGAAACCCAAGCCTCTTCGACATCTCAATCACAGCTTCACGATCGCTGTTT
 
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JMFN038A16+           GCACAAGCAAGAACCATTCTTAAATAATCATCAACAAAATGCTTAGGGTAGTCCCGAGCT
rJMSF040A22-          GCACAAGCAAGAACCATTCTTAAATAATCATCAACAAAATGCTTAGGGTAGTCCCGAGCT
                      ____________________________________________________________
consensus             GCACAAGCAAGAACCATTCTTAAATAATCATCAACAAAATGCTTAGGGTAGTCCCGAGCT
 
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JMFN038A16+           GCTCCAAAGTCTATGAGATTGATTGATTTTGATGGCTCATCATAAAGAAAA         
rJMSF040A22-          GCTCCAAAGTCTATGAGATTGATTGATTTTGATGGCTCATCATAAAGAAAATTGCTCCAG
                      ____________________________________________________________
consensus             GCTCCAAAGTCTATGAGATTGATTGATTTTGATGGCTCATCATAAAGAAAATTGCTCCAG
 
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rJMSF040A22-          TTGGGATCTGTCTGCATGAAACGAAAGATAAACAGCTCTTTCAATGTGAGTTCAAGCAAT
                      ____________________________________________________________
consensus             TTGGGATCTGTCTGCATGAAACGAAAGATAAACAGCTCTTTCAATGTGAGTTCAAGCAAT
 
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rJMSF040A22-          TTTTTTTCAACATGGTTGCGAGTTTCTTGGTCAAAGCAATGCTACCTTATCAATTGGNAA
                      ____________________________________________________________
consensus             TTTTTTTCAACATGGTTGCGAGTTTCTTGGTCAAAGCAATGCTACCTTATCAATTGGNAA
 
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rJMSF040A22-          TTCCTGGGGACAAGTTCCTGAAGTTAATACTCTTTTGCCTGACAACTCATCTATCACAGC
                      ____________________________________________________________
consensus             TTCCTGGGGACAAGTTCCTGAAGTTAATACTCTTTTGCCTGACAACTCATCTATCACAGC