Contig 002942:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018M17Sequence457002373 (4)270002942 (2)
JMSF038G02Sequence711002373 (4)ref|XP_006363966.1|1e-05PREDICTED: uncharacterized protein LOC102593551 isoform X1 [Solanum tuberosum] 897002942 (2)ref|XP_011083401.1|4e-103PREDICTED: uncharacterized protein LOC105165931 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF038G02+             CAAGATTAGGTAGATCCCTCAGTGGACTTACAGTAAGAAGGTCATTAGTTGGCTCAT
                      ____________________________________________________________
consensus                CAAGATTAGGTAGATCCCTCAGTGGACTTACAGTAAGAAGGTCATTAGTTGGCTCAT
 
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rJMSF038G02+          TCGAGGAGTCACTATTTTCCGGTCGTTNGGCATCAGGAACTGTTAGCCAGAAAATTGAAG
                      ____________________________________________________________
consensus             TCGAGGAGTCACTATTTTCCGGTCGTTNGGCATCAGGAACTGTTAGCCAGAAAATTGAAG
 
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rJMSF038G02+          GTTTTCTTGCTGTCCTTAGTATTTCTGGAGGGAATTTCTCTCCACATCCAAAGAAACTTC
                      ____________________________________________________________
consensus             GTTTTCTTGCTGTCCTTAGTATTTCTGGAGGGAATTTCTCTCCACATCCAAAGAAACTTC
 
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rJMSF038G02+          CATTTGCAGTAACGAGTGTGGATGGTGGCAACTGTTTGGTGTATTACTCATCCATAGATC
                      ____________________________________________________________
consensus             CATTTGCAGTAACGAGTGTGGATGGTGGCAACTGTTTGGTGTATTACTCATCCATAGATC
 
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rJMSF038G02+          TTGGAGGACATTTCTTAACTAATGAGTGTAAAGGCTCTAAAATGAAGAGAAGCCTTAGCA
                      ____________________________________________________________
consensus             TTGGAGGACATTTCTTAACTAATGAGTGTAAAGGCTCTAAAATGAAGAGAAGCCTTAGCA
 
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rJMSF038G02+          TTAATGACTCCCAGACAAATGGTCGGCTGCGTATACCTATGAAAGGGCGTATCCAACTGG
                      ____________________________________________________________
consensus             TTAATGACTCCCAGACAAATGGTCGGCTGCGTATACCTATGAAAGGGCGTATCCAACTGG
 
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rJMSF038G02+          TTCTCAGCAATCCAGAAAGGACTCCCATTCATACATTTTTCTGTAACTATGATTTGACTG
                      ____________________________________________________________
consensus             TTCTCAGCAATCCAGAAAGGACTCCCATTCATACATTTTTCTGTAACTATGATTTGACTG
 
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rJMFF018M17+                    TGGGACCAAGACATTTCTGCGGCNNNNGATAACTTTGGACACGGACAAAG
rJMSF038G02+          ACATGCCTGCTGGGACCAAGACATTTCTGCGGCAAAAGATAACTTTGGACACGGACAAAG
                      ____________________________________________________________
consensus             ACATGCCTGCTGGGACCAAGACATTTCTGCGGCAAAAGATAACTTTGGACACGGACAAAG
 
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rJMFF018M17+          GCGGCCATAAGGATGCTAAGGGGAAAAGNGATGGAAGGCANCCTCCAGTTACAAAGGCTG
rJMSF038G02+          GCGGCCATAAGGATGCTAAGGGGAAAAGTGATGGAAGGCAACCTCCAGTTACAAAGGCTG
                      ____________________________________________________________
consensus             GCGGCCATAAGGATGCTAAGGGGAAAAGTGATGGAAGGCAACCTCCAGTTACAAAGGCTG
 
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rJMFF018M17+          AGGATTCTTTGCAATTTAGTGAGGTANTTTCAGACNGTAGGAAATCANANGANNNTAGTA
rJMSF038G02+          AGGATTCTTTGCAATCTAGTGAGGTACTTTCAGATTGTAGGAAATCAAATGACTGTAGTA
                      ____________________________________________________________
consensus             AGGATTCTTTGCAATTTAGTGAGGTACTTTCAGATTGTAGGAAATCAAATGACTGTAGTA
 
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rJMFF018M17+          GCGGTGTTGTAGAGGGCATTGGTTGNCCTTTTGGTGGAACTGGCAGCAAATCTGTAGNTT
rJMSF038G02+          GCGGTGTTGTAGAGGGCATTGGTTGGCCTTTTGGTGGAACTGGCAGCAAATCTGTAGATT
                      ____________________________________________________________
consensus             GCGGTGTTGTAGAGGGCATTGGTTGGCCTTTTGGTGGAACTGGCAGCAAATCTGTAGATT
 
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rJMFF018M17+          GCCCTTCAAAGATAAATGAGAATGCAGCTGGTACAGGTG                     
rJMSF038G02+          GCCCTTCAAAGATAAATGAGAATGCAGCTGGTACAGGTGTTCTGCGCTATGCTCTCCATA
                      ____________________________________________________________
consensus             GCCCTTCAAAGATAAATGAGAATGCAGCTGGTACAGGTGTTCTGCGCTATGCTCTCCATA
 
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rJMSF038G02+          TCCGGTTTTTGTGCCCTTACTCTAAGAGAAACTCAAAAACAGTTCTGAGGTGCAAATCTG
                      ____________________________________________________________
consensus             TCCGGTTTTTGTGCCCTTACTCTAAGAGAAACTCAAAAACAGTTCTGAGGTGCAAATCTG
 
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rJMSF038G02+          ACCCTTCATCTGTACCCACAAAAAATNGCACGGNTATCGAAGGGGATGCGACGCTTCTAG
                      ____________________________________________________________
consensus             ACCCTTCATCTGTACCCACAAAAAATNGCACGGNTATCGAAGGGGATGCGACGCTTCTAG
 
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rJMSF038G02+          CTNGTACAACTGATCATGAGAGGTCGTGTTTCACTCAACGTCATTCAGAATGCTGATGAA
                      ____________________________________________________________
consensus             CTNGTACAACTGATCATGAGAGGTCGTGTTTCACTCAACGTCATTCAGAATGCTGATGAA