Contig 002937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001F04Sequence576002937 (4)gb|KGN63923.1|2e-103hypothetical protein Csa_1G027520 [Cucumis sativus]
JMCP006E06Sequence577002937 (4)ref|XP_007017105.1|3e-104Leucine-rich repeat protein kinase family protein isoform 2 [Theobroma cacao] g
JMSF034P22Sequence607013473 (5)686002937 (4)emb|CAN75549.1|3e-81hypothetical protein VITISV_043541 [Vitis vinifera]
JMSF037J18Sequence690013473 (5)687002937 (4)emb|CAN75549.1|3e-81hypothetical protein VITISV_043541 [Vitis vinifera]

Alignment

This contig is upended


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rJMCP006E06+                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMCP006E06+          TCGTCTTCCTACTATTATCATCTTACGCCATTAACTGAACTCTTTGCCCATGTGATACGA
JMCP001F04+            CGTCTTCCTACTATTATCATCTTACGCCATTAACTGAACTCTTTGCCCATGTGATACGA
                      ____________________________________________________________
consensus             TCGTCTTCCTACTATTATCATCTTACGCCATTAACTGAACTCTTTGCCCATGTGATACGA
 
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rJMCP006E06+          CAGTTAAATCTAAAGATCCTCTAACCTTTGCCTTGAGATTGAGAGTCGCACTGGGTTCCG
JMCP001F04+           CAGTTAAATCTAAAGATCCTCTAACCTTTGCCTTGAGATTGAGAGTCGCACTGGGTTCCG
                      ____________________________________________________________
consensus             CAGTTAAATCTAAAGATCCTCTAACCTTTGCCTTGAGATTGAGAGTCGCACTGGGTTCCG
 
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rJMCP006E06+          CGAAGGGCATTCTATATTTGCACACGGAAGCTGATCCGCCTATATTCCATAGAGATATCA
JMCP001F04+           CGAAGGGCATTCTATATTTGCACACGGAAGCTGATCCGCCTATATTCCATAGAGATATCA
                      ____________________________________________________________
consensus             CGAAGGGCATTCTATATTTGCACACGGAAGCTGATCCGCCTATATTCCATAGAGATATCA
 
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rJMCP006E06+          AGGCAAGTAACATATTGTTGGACGCAAAATTTACAGCCAAGGTTGCTGATTTTGGACTTT
JMCP001F04+           AGGCAAGTAACATATTGTTGGACGCAAAATTTACAGCCAAGGTTGCTGATTTTGGACTTT
                      ____________________________________________________________
consensus             AGGCAAGTAACATATTGTTGGACGCAAAATTTACAGCCAAGGTTGCTGATTTTGGACTTT
 
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rJMCP006E06+          CACGGCTTGCGCCTGTCCCTGATCTCGAAGGGGAGGTCCCCGCTCACGTATCGACGGTTG
JMCP001F04+           CACGGCTTGCGCCTGTCCCTGATCTCGAAGGGGAGGTCCCCGCTCACGTATCGACGGTTG
rJMSF034P22+                                            GGTCCCCGCTCACGTATCGACGGTTG
rJMSF037J18+                                            GGTCCCCGCTCACGTATCGACGGTTG
                      ____________________________________________________________
consensus             CACGGCTTGCGCCTGTCCCTGATCTCGAAGGGGAGGTCCCCGCTCACGTATCGACGGTTG
 
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rJMCP006E06+          TTAAGGGTACTCCGGGATATCTCGACCCGGAGTATTTCCTAACCCACAAACTCACGGACA
JMCP001F04+           TTAAGGGTACTCCGGGACATCTCGACCCGGAGTATTTCCTAACCCACAAACTCACGGACA
rJMSF034P22+          TTAAGGGTACTCCGGGATATCTCGACCCGGAGTATTTCCTAACCCACAAACTCACGGACA
rJMSF037J18+          TTAAGGGTACTCCGGGATATCTCGACCCGGAGTATTTCCTAACCCACAAACTCACGGACA
                      ____________________________________________________________
consensus             TTAAGGGTACTCCGGGATATCTCGACCCGGAGTATTTCCTAACCCACAAACTCACGGACA
 
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rJMCP006E06+          AGAGCGATGTTTACAGCCTTGGTGTAGTATTCCTCGAGTTGTTGACTGGAATGCACCCTA
JMCP001F04+           AGAGCGATGTTTACAGCCTTGGTGTAGTATTCCTCGAGTTGTTGACTGGAATGCACCCTA
rJMSF034P22+          AGAGCGATGTTTACAGCCTTGGTGTAGTATTCCTCGAGTTGTTGACTGGAATGCACCCTA
rJMSF037J18+          AGAGCGATGTTTACAGCCTTGGTGTAGTATTCCTCGAGTTGTTGACTGGAATGCACCCTA
                      ____________________________________________________________
consensus             AGAGCGATGTTTACAGCCTTGGTGTAGTATTCCTCGAGTTGTTGACTGGAATGCACCCTA
 
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rJMCP006E06+          TTTCTCACGGCAAAAATATTGTTAGGGAGGTAAACGTTGCATATTCTTCGGGCATGATAT
JMCP001F04+           TTTCTCACGGCAAAAATATTGTTAGGGAGGTAAACGTTGCATATTCTTCGGGCACGATAT
rJMSF034P22+          TTTCTCACGGCAAAAATATTGTTAGGGAGGTAAACGTTGCATATTCTTCGGGCATGATAT
rJMSF037J18+          TTTCTCACGGCAAAAATATTGTTAGGGAGGTAAACGTTGCATATTCTTCGGGCATGATAT
                      ____________________________________________________________
consensus             TTTCTCACGGCAAAAATATTGTTAGGGAGGTAAACGTTGCATATTCTTCGGGCATGATAT
 
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rJMCP006E06+          TCTCTGTGATTGATGAGCGGATGGGATCATATCCTTCTGAATGCGTGGAGAAGTTCATAA
JMCP001F04+           TCTCTGTGATTGATGAGCGGATGGGATCATATCCTagTGAATGCGTGGAGAAGTTCATAA
rJMSF034P22+          TCTCTGTGATTGATGAGCGGATGGGATCATATCCTTCTGAATGCGTGGAGAAGTTCATAA
rJMSF037J18+          TCTCTGTGATTGATGAGCGGATGGGATCATATCCTTCTGAATGCGTGGAGAAGTTCATAA
                      ____________________________________________________________
consensus             TCTCTGTGATTGATGAGCGGATGGGATCATATCCTTCTGAATGCGTGGAGAAGTTCATAA
 
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rJMCP006E06+          CACTGGCTCTCAAATGCTGCCAAGACGACACAGATT                        
JMCP001F04+           CACTGGCTCTCAAATGCTGCCAAGACGACACAGATT                        
rJMSF034P22+          CACTGGCTCTCAAATGCTGCCAAGACGACACAGATTCCCGGCCTTCAATGGCAGAAGTGG
rJMSF037J18+          CACTGGCTCTCAAATGCTGCCAAGACGACACAGATTCCCGGCCTTCAATGGCAGAAGTGG
                      ____________________________________________________________
consensus             CACTGGCTCTCAAATGCTGCCAAGACGACACAGATTCCCGGCCTTCAATGGCAGAAGTGG
 
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rJMSF034P22+          TTCGAGAACTGGAAGCCATATGGCTTATGATGCCGGAGTCTGACACCAGAATCAGAGATT
rJMSF037J18+          TTCGAGAACTGGAAGCCATATGGCTTATGATGCCGGAGTCTGACACCAGAATCAGAGATT
                      ____________________________________________________________
consensus             TTCGAGAACTGGAAGCCATATGGCTTATGATGCCGGAGTCTGACACCAGAATCAGAGATT
 
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rJMSF034P22+          CATCATCGGTCACTGATCCGATCAAGGATGTCAGCTCTTCATCTGCATCGGCGCCCATGA
rJMSF037J18+          CATCATCGGTCACTGATCCGATCAAGGATGTCAGCTCTTCATCTGCATCGGCGCCCATGA
                      ____________________________________________________________
consensus             CATCATCGGTCACTGATCCGATCAAGGATGTCAGCTCTTCATCTGCATCGGCGCCCATGA
 
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rJMSF034P22+          AAAATCCATATATTTCAACTGATGTCTCCGGCAGTGACCTAGTCAGCGGCGTCGTCCACA
rJMSF037J18+          AAAATCCATATATTTCAACTGATGTCTCCGGCAGTGACCTAGTCAGCGGCGTCGTCCACA
                      ____________________________________________________________
consensus             AAAATCCATATATTTCAACTGATGTCTCCGGCAGTGACCTAGTCAGCGGCGTCGTCCACA
 
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rJMSF034P22+          CCATTACTCCCAGATGATGCATAAAACCAGGGGCAAAGAAACATGTTTGTATATAGCCAT
rJMSF037J18+          CCATTACTCCCAGATGATGCATAAAACCAGGGGCAAAGAAACATGTTTGTATATAGCCAT
                      ____________________________________________________________
consensus             CCATTACTCCCAGATGATGCATAAAACCAGGGGCAAAGAAACATGTTTGTATATAGCCAT
 
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rJMSF034P22+          CCATAGAGACTTGTTTCTGTTTGCAGAATTCAGTAGTTAGTTGTTGCTGGACAACATGAT
rJMSF037J18+          CCATAGAGACTTGTTTCTGTTTGCAGAATTCAGTAGTTAGTTGTTGCTGGACAACATGAT
                      ____________________________________________________________
consensus             CCATAGAGACTTGTTTCTGTTTGCAGAATTCAGTAGTTAGTTGTTGCTGGACAACATGAT
 
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rJMSF034P22+          TCTGTTATTGTAGTGTCTTGTTTGTTAAGGATCCACTCTCATTTTGATACCTGAATGTGA
rJMSF037J18+          TCTGTTATTGTAGTGTCTTGTTTGTTAAGGATCCACTCTCATTTTGATACCTGAATGTGA
                      ____________________________________________________________
consensus             TCTGTTATTGTAGTGTCTTGTTTGTTAAGGATCCACTCTCATTTTGATACCTGAATGTGA