| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF027E19 | Sequence | 661 | 002934 (6) | ref|XP_009758196.1| | 192 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] | 699 | 002934 (6) | ref|XP_009758196.1| | 197 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] |
| JMSF036O07 | Sequence | 667 | 002934 (6) | ref|XP_009758196.1| | 203 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] | 691 | 002934 (6) | ref|XP_009758196.1| | 197 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] |
| JMSF050G17 | Sequence | 681 | 002934 (6) | ref|XP_009758196.1| | 204 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] | 771 | 002934 (6) | ref|XP_009758196.1| | 200 | PREDICTED: uncharacterized protein LOC104210918 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF027E19- ACTAAAACCTACCCAAGATACACAGTTACACATTGCAGTGCTC
JMSF050G17- GCACTAAAACCTACCCAAGATACACAGTTACACATTGCAGTGCTC
JMSF036O07- ATTGCAGTGCTC
____________________________________________________________
consensus GCACTAAAACCTACCCAAGATACACAGTTACACATTGCAGTGCTC
. : . : . : . : . : . :
JMSF027E19- AGAGGAAACCAAGAAACATGAAAACTTTGAGGATTCAATTCCATTTAAAACACCCAAATT
JMSF050G17- AGAGGAAACCAAGAAACATGAAAACTTTGAGGATTCAATTCCATTTAAAACACCCAAATT
JMSF036O07- AGAGGAAACCAAGAAACATGAAAACTTTGAGGATTCAATTCCATTTAAAACACCCAAATT
rJMSF050G17+ AAACACCCAAATT
____________________________________________________________
consensus AGAGGAAACCAAGAAACATGAAAACTTTGAGGATTCAATTCCATTTAAAACACCCAAATT
. : . : . : . : . : . :
JMSF027E19- TCAAGTCCCCATCTTCAAATCATGCATTTCTCATCCAAACCAAACCCAAATCACACCTAA
JMSF050G17- TCAAGTCCCCATCTTCAAATCATGCATTTCTCATCCAAACCAAACCCAAATCACACCTAA
JMSF036O07- TCAAGTCCCCATCTTCAAATCATGCATTTCTCATCCAAACCAAACCCAAATCACACCTAA
rJMSF050G17+ TCAAGTCCCCATCTTCAAATCATGCATTTCTCATCCAAACCAAACCCAAATCACACCTAA
rJMSF027E19+ ACCCAAATCACACNTAA
____________________________________________________________
consensus TCAAGTCCCCATCTTCAAATCATGCATTTCTCATCCAAACCAAACCCAAATCACACCTAA
. : . : . : . : . : . :
JMSF027E19- AACACCCAAAGAAGGAGGAGCCTTCCTTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
JMSF050G17- AACACCCAAAGAAGGAGGAGCCTTCCCTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
JMSF036O07- AACACCCAAAGAAGGAGGAGCCTTCCTTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
rJMSF050G17+ AACACCCAAAGAAGGAGGAGCCTTCCCTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
rJMSF027E19+ AACACCCAAAGAAGGAGGAGCCTTCCTTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
rJMSF036O07+ TCTGCAACCCAAAATGTCACTGATTTGCCCA
____________________________________________________________
consensus AACACCCAAAGAAGGAGGAGCCTTCCTTTTCTGCAACCCAAAATGTCACTGATTTGCCCA
. : . : . : . : . : . :
JMSF027E19- GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
JMSF050G17- GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
JMSF036O07- GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
rJMSF050G17+ GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
rJMSF027E19+ GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
rJMSF036O07+ GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
____________________________________________________________
consensus GTGCCAAGACTCCACTTCTTCAAACCATTAATACCTCATTCAAGAAAACCCATCTTCAAA
. : . : . : . : . : . :
JMSF027E19- TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
JMSF050G17- TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
JMSF036O07- TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
rJMSF050G17+ TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
rJMSF027E19+ TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
rJMSF036O07+ TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
____________________________________________________________
consensus TCATCCCCAAATCCCAGAAACTTTCAAGAAATGGGTTTTCTTTATCTGAAACAGGGTCAA
. : . : . : . : . : . :
JMSF027E19- ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
JMSF050G17- ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
JMSF036O07- ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
rJMSF050G17+ ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
rJMSF027E19+ ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
rJMSF036O07+ ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
____________________________________________________________
consensus ATGATGAGAAGAATTCAAGAATTTTGATACTGGGAGCTGTGTCAATAGGAGTTGTGATGT
. : . : . : . : . : . :
JMSF027E19- TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
JMSF050G17- TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
JMSF036O07- TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
rJMSF050G17+ TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
rJMSF027E19+ TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
rJMSF036O07+ TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
____________________________________________________________
consensus TTCTTATGGGTGTTGGGGATGAAAAGGCACTTGCTTTAGGCCCTCGAGGTCCATTAATGG
. : . : . : . : . : . :
JMSF027E19- AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
JMSF050G17- AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
JMSF036O07- AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
rJMSF050G17+ AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
rJMSF027E19+ AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
rJMSF036O07+ AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
____________________________________________________________
consensus AGGACTTTTGGGACAACATGAGGAGATATGCAATTTATGCACTGACAGTGAGTACAGGTG
. : . : . : . : . : . :
JMSF027E19- TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
JMSF050G17- TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
JMSF036O07- TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
rJMSF050G17+ TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
rJMSF027E19+ TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
rJMSF036O07+ TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
____________________________________________________________
consensus TTCTCTACGCTGTTTTCCAGCCAATCTATGAGCTGTTGAAGAACCCCATTTCTGCAGTTC
. : . : . : . : . : . :
JMSF027E19- TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
JMSF050G17- TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
JMSF036O07- TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
rJMSF050G17+ TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
rJMSF027E19+ TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
rJMSF036O07+ TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
____________________________________________________________
consensus TCGTAGTCACTATCATTGCAGGCAGCATTTTCATTGTTTCTCAGGTCCTTTCTGCCATGG
. : . : . : . : . : . :
JMSF027E19- TTGGTGTCTCTGACTT
JMSF050G17- TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACT
JMSF036O07- TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACTAGTGGTTGTGTTCAAGCC
rJMSF050G17+ TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACTAGTGGTTGTGTTCAAGCCAAGAAC
rJMSF027E19+ TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACTAGTGGTTGTGTTCAAGCCAAGAAC
rJMSF036O07+ TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACTAGTGGTTGTGTTCAAGCCAAGAAC
____________________________________________________________
consensus TTGGTGTCTCTGACTTCTCCTATGAGTATAGCTACTAGTGGTTGTGTTCAAGCCAAGAAC
. : . : . : . : . : . :
rJMSF050G17+ AAGAAATCTTTTTATTTCCTATATTGTCTGGGATTTGGGCTTTTGCTTAGACAAATGTTG
rJMSF027E19+ AAGAAATCTTTTTATTTCCTATATTGTCTGGGATTTGGGCTTTTGCTTAGACAAATGTTG
rJMSF036O07+ AAGAAATCTTTTTATTTCCTATATTGTCTGGGATTTGGGCTTTTGCTTAGACAAATGTTG
____________________________________________________________
consensus AAGAAATCTTTTTATTTCCTATATTGTCTGGGATTTGGGCTTTTGCTTAGACAAATGTTG
. : . : . : . : . : . :
rJMSF050G17+ C--ATTCTACAAAATCTTCAATTTTTCTCTTTGATAAATTGGTGATAGCTTCTTGCTACT
rJMSF027E19+ CATATTCTACAAAATCTTCAATTTTTCTCTTTTATAAATTGGTGATAGCTTCTTGCTACT
rJMSF036O07+ CATATTCTACAAAATCTTCAATTTTTCTCTTTGATAAATTGGTGATAGCTTCTTGCTACT
____________________________________________________________
consensus CATATTCTACAAAATCTTCAATTTTTCTCTTTGATAAATTGGTGATAGCTTCTTGCTACT
. : . : . : . : . : . :
rJMSF050G17+ ACCAGTACTACATAATCATTGT
rJMSF027E19+ ACCAGTACTACATAATCATTGT
rJMSF036O07+ ACCAGTACTACATAATCATTGTTGTATTATTATGTGTCTTTTTTAATTGTAAGAGAATTT
____________________________________________________________
consensus ACCAGTACTACATAATCATTGTTGTATTATTATGTGTCTTTTTTAATTGTAAGAGAATTT