Contig 002930:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036K05Sequence664002930 (4)ref|XP_006341596.1|1e-44PREDICTED: 60S ribosomal protein L14, mitochondrial-like isoform X1 [Solanum tu672002930 (4)ref|XP_006341596.1|5e-83PREDICTED: 60S ribosomal protein L14, mitochondrial-like isoform X1 [Solanum tu
JMSF042G18Sequence768002930 (4)ref|XP_006341596.1|6e-71PREDICTED: 60S ribosomal protein L14, mitochondrial-like isoform X1 [Solanum tu726002930 (4)ref|XP_006341596.1|2e-83PREDICTED: 60S ribosomal protein L14, mitochondrial-like isoform X1 [Solanum tu

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036K05- GGCCCCAGTCCCCATCTGCCATCTGCGCTCTCCCGCTTCTCCGTT
JMSF042G18- GATTTTCCCTGGCCCCAGTCCCCATCTGCCATCTGCGCTCTCCCGTTTCTCCGTT
                      ____________________________________________________________
consensus GATTTTCCCTGGCCCCAGTCCCCATCTGCCATCTGCGCTCTCCCGTTTCTCCGTT
 
. : . : . : . : . : . :
JMSF036K05- CTCAGTACCTCAGCCGACTCTCATCCCTCACCGCTCCGGCACCATCCCAGACTCCCTCTG
JMSF042G18- CTCAGTACCTCAGCCGACTCTCATCCCTCACCGCTCCGGCACCATCCCAGACTCCCTCTG
                      ____________________________________________________________
consensus CTCAGTACCTCAGCCGACTCTCATCCCTCACCGCTCCGGCACCATCCCAGACTCCCTCTG
 
. : . : . : . : . : . :
JMSF036K05- CAGTCTGCGGCTCTGCCTCTCTGCCGTCTCTGACTCTCTACCTCTCTGGAGTCTGATCGT
JMSF042G18- CAGTCTGCGGCTCTGCCTCTCTGCCGTCTCTGACTCTCTACCTCTCTGGAGTCTGATCGT
                      ____________________________________________________________
consensus CAGTCTGCGGCTCTGCCTCTCTGCCGTCTCTGACTCTCTACCTCTCTGGAGTCTGATCGT
 
. : . : . : . : . : . :
JMSF036K05- CTGCCTCTCTGCTGTCGCTGTATCGAGCTCCAGCTCATCATTGCTCAACCCTTCGCCGGC
JMSF042G18- CTGCCTCTCTGCTGTCGCTGTATCGAGCTCCAGCTCATCATTGCTCAACCCTTCGCCGGC
                      ____________________________________________________________
consensus CTGCCTCTCTGCTGTCGCTGTATCGAGCTCCAGCTCATCATTGCTCAACCCTTCGCCGGC
 
. : . : . : . : . : . :
JMSF036K05- TGATTTTCTCCCATTGACGGCTCCACATAATTAGCTCACTCACGAAAGATAAGGACTTCC
JMSF042G18- TGATTTTCTCCCATTGACGGCTCCACATAATTAGCTCACTCACGAAAGATAAGGACTTCC
rJMSF042G18+ TCCCATTGACGGCTCCACATAATTAGCTCACTCACGAAAGATAAGGACTTCC
                      ____________________________________________________________
consensus TGATTTTCTCCCATTGACGGCTCCACATAATTAGCTCACTCACGAAAGATAAGGACTTCC
 
. : . : . : . : . : . :
JMSF036K05- ATAAATTTGTTGTGTGAATTTGTAACCAGTGATGGCTGCATCTTCTTCTCGGTTGCTCCG
JMSF042G18- ATAAATTTGTTGTGTGAATTTGTAACCAGTGATGGCTGCATCTTCTTCTCGGTTGCTCCG
rJMSF042G18+ ATAAATTTGTTGTGTGAATTTGTAACCAGTGATGGCTGCATCTTCTTCTCGGTTGCTCCG
rJMSF036K05+ CTCGGTTGCTCCG
                      ____________________________________________________________
consensus ATAAATTTGTTGTGTGAATTTGTAACCAGTGATGGCTGCATCTTCTTCTCGGTTGCTCCG
 
. : . : . : . : . : . :
JMSF036K05- TGGTTGTTCTTTATTGGGTGGCCTTTGTAACAACTCTGCCTTGTTCACGAGAGCATCACC
JMSF042G18- TGGTTGTTCTTTATTGGGTGGCCTTTGTAACAACTCTGCCTTGTTCACGAGAGCATCACC
rJMSF042G18+ TGGTTGTTCTTTATTGGGTGGCCTTTGTAACAACTCTGCCTTGTTCACGAGAGCATCACC
rJMSF036K05+ TGGTTGTTCTTTATTGGGTGNCCTTTGTAACAACTCTGCCTTGTTCACGAGAGCATCACC
                      ____________________________________________________________
consensus TGGTTGTTCTTTATTGGGTGGCCTTTGTAACAACTCTGCCTTGTTCACGAGAGCATCACC
 
. : . : . : . : . : . :
JMSF036K05- TGAGATTATATCCAACGATTTATCCACACAGCAACTAAGAACGTTTATACAAATGAGGAC
JMSF042G18- TGAGATTATATCCAACGATTTATTCACACAGCAACTAAGAACGTTTATACAAATGAGGAC
rJMSF042G18+ TGAGATTATATCCAACGATTTATTCACACAGCAACTAAGAACGTTTATACAAATGAGGAC
rJMSF036K05+ TGAGATTATATCCAACGATTTATCCACACAGCAACTAAGAACGTTTATACAAATGAGGAC
                      ____________________________________________________________
consensus TGAGATTATATCCAACGATTTATTCACACAGCAACTAAGAACGTTTATACAAATGAGGAC
 
. : . : . : . : . : . :
JMSF036K05- CAACCTGAAAGTGGTAGACAATTCGGGTGCGAAAAGAGTTATGTGCATACAAGCATTGAA
JMSF042G18- CAACCTGAAAGTGGTAGACAATTCGGGTGCGAAAAGAGTTATGTGCATACAAGCATTGAA
rJMSF042G18+ CAACCTGAAAGTGGTAGACAATTCGGGTGCGAAAAGAGTTATGTGCATACAAGCATTGAA
rJMSF036K05+ CAACCTGAAAGTGGTAGACAATTCGGGTGCGAAAAGAGTTATGTGCATACAAGCATTGAA
                      ____________________________________________________________
consensus CAACCTGAAAGTGGTAGACAATTCGGGTGCGAAAAGAGTTATGTGCATACAAGCATTGAA
 
. : . : . : . : . : . :
JMSF036K05- GGGCAAGAAAGGAGCAAGGCTGGGGGATACAATAGTTTGCTCGGTAAAGGAAGCGCAGCC
JMSF042G18- GGGCAAGAAAGGAGCAAGGCTGGGGGATACAATAGTTTGCTCGGTAAAGGAAGCGCAGCC
rJMSF042G18+ GGGCAAGAAAGGAGCAAGGCTGGGGGATACAATAGTTTGCTCGGTAAAGGAAGCGCAGCC
rJMSF036K05+ GGGCAAGAAAGGAGCAAGGCTGGGGGATACAATAGTTTGCTCGGTAAAGGAAGCGCAGCC
                      ____________________________________________________________
consensus GGGCAAGAAAGGAGCAAGGCTGGGGGATACAATAGTTTGCTCGGTAAAGGAAGCGCAGCC
 
. : . : . : . : . : . :
JMSF036K05- AGGTGGGAAAGTGAAGAAAGGAGAGGTTCACTACGGCGTAGTTGTTCGGGCTGCAATGCC
JMSF042G18- AGGTGGGAAAGTGAAGAAAGGAGAGGTTCACTACGGCGTAGTTGTTCGGGCTGCAATGCC
rJMSF042G18+ AGGTGGGAAAGTGAAGAAAGGAGAGGTTCACTACGGCGTAGTTGTTCGGGCTGCAATGCC
rJMSF036K05+ AGGTGGGAAAGTGAAGAAAGGAGAGGTTCACTACGGCGTAGTTGTTCGGGCTGCAATGCC
                      ____________________________________________________________
consensus AGGTGGGAAAGTGAAGAAAGGAGAGGTTCACTACGGCGTAGTTGTTCGGGCTGCAATGCC
 
. : . : . : . : . : . :
JMSF036K05- AAGGGGCCGGTGTGATGG
JMSF042G18- AAGGGGCCGGTGTGATGGGAGCGAAGTGAAGTTTGACGACAACGCTGTGGTGCTTATCAA
rJMSF042G18+ AAGGGGCCGGTGTGATGGGAGCGAAGTGAAGTTTGACGACAACGCTGTGGTGCTTATCAA
rJMSF036K05+ AAGGGGCCGGTGTGATGGGAGCGAAGTGAAGTTTGACGACAACGCTGTGGTGCTTATCAA
                      ____________________________________________________________
consensus AAGGGGCCGGTGTGATGGGAGCGAAGTGAAGTTTGACGACAACGCTGTGGTGCTTATCAA
 
. : . : . : . : . : . :
JMSF042G18- CAAGCACGGAGAGCCAATCGGTACCAGAGTTTTCGGCCCCGTTCCCCACGAGC
rJMSF042G18+ CAAGCACGGAGAGCCAATCGGTACCAGAGTTTTCGGCCCCGTTCCCCACGAGCTTAGGAA
rJMSF036K05+ CAAGCACGGAGAGCCAATCGGTACCAGAGTTTTCGGCCCCGTTCCCCACGAGCTTAGGAA
                      ____________________________________________________________
consensus CAAGCACGGAGAGCCAATCGGTACCAGAGTTTTCGGCCCCGTTCCCCACGAGCTTAGGAA
 
. : . : . : . : . : . :
rJMSF042G18+ AAAGAAGCACATCAAGATTCTGAGCCTCGCGGAGCACATTGCCTGAGGTAATAGATACTC
rJMSF036K05+ AAAGAAGCACATCAAGGTTCTGAGCCTCGCGGAGCACATTGCCTGAGGTAATAGATACTC
                      ____________________________________________________________
consensus AAAGAAGCACATCAAGGTTCTGAGCCTCGCGGAGCACATTGCCTGAGGTAATAGATACTC
 
. : . : . : . : . : . :
rJMSF042G18+ TTCCTGTGCTGTGCTACTTTGGAATAGGTCTTAGCACAAGCTAGTCTTGTTTTTGCTAGG
rJMSF036K05+ TTCCTGTGCTGTGCTACTTTGGAATAGGTCTTAGTACAAGCTAGTCTTGTTTTTGCTAGG
                      ____________________________________________________________
consensus TTCCTGTGCTGTGCTACTTTGGAATAGGTCTTAGTACAAGCTAGTCTTGTTTTTGCTAGG
 
. : . : . : . : . : . :
rJMSF042G18+ GTCTGGGATTGAATAGGTACATTATTTTACCCATGTTACCAGGATACCAGTGGACCAGGA
rJMSF036K05+ GTCTGGGATTGAATAGGTACATTATTTTACCCATGTTACCAGGATA-CAGTGGACCAGGA
                      ____________________________________________________________
consensus GTCTGGGATTGAATAGGTACATTATTTTACCCATGTTACCAGGATACCAGTGGACCAGGA
 
. : . : . : . : . : . :
rJMSF042G18+ TTTACATATTAAGA
rJMSF036K05+ TTTACATATTAAGATGGATTCTTAATAGAAGTTTATTTTTAGTGTACTACATGTTCATTT
                      ____________________________________________________________
consensus TTTACATATTAAGATGGATTCTTAATAGAAGTTTATTTTTAGTGTACTACATGTTCATTT