Contig 002929:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF036I07Sequence575002929 (2)ref|XP_009757587.1|3e-40PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris]
JMSF036J07Sequence640015807707002929 (2)ref|XP_006358681.1|7e-74PREDICTED: uncharacterized protein At1g04910-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF036J07+                    TATCCAAACGTGGTTAGAAAGGAGACACTGTTGGAGCCTTCTGATCTTAG
                      ____________________________________________________________
consensus                       TATCCAAACGTGGTTAGAAAGGAGACACTGTTGGAGCCTTCTGATCTTAG
 
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rJMSF036J07+          GTTCTTTCAAAATCACTCATCCCAGATGGCAGCACTAGATTATCTTGTTTCATTGGAGAG
                      ____________________________________________________________
consensus             GTTCTTTCAAAATCACTCATCCCAGATGGCAGCACTAGATTATCTTGTTTCATTGGAGAG
 
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rJMSF036I07+                             TATGACGGAAACATGGCTAAAGNTGTTGAAGGACACCGCAG
rJMSF036J07+          TGATATTTTCATTCCTACGTATGACGGAAACATGGCTAAAGTTGTTGAAGGACACCGCAG
                      ____________________________________________________________
consensus             TGATATTTTCATTCCTACGTATGACGGAAACATGGCTAAAGTTGTTGAAGGACACCGCAG
 
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rJMSF036I07+          ACATCTTGGGTACAGGAAGACGATCCTTCTGGACCGAAAGGTTNTGGTTGAGTTGATAGA
rJMSF036J07+          ACATCTTGGGTACAGGAAGACGATCCTTCTGGACCGAAAGGTTCTGGTTGAGTTGATAGA
                      ____________________________________________________________
consensus             ACATCTTGGGTACAGGAAGACGATCCTTCTGGACCGAAAGGTTCTGGTTGAGTTGATAGA
 
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rJMSF036I07+          CCGGTNCGANGAAGGGTCATTTACATGGCATGAGTTCTNTAATGCTGTAAAGGAATCTCA
rJMSF036J07+          CCGGTACGATGAAGGGTCATTTACATGGCATGAGTTCTCTAATGCTGTAAAGGAATCTCA
                      ____________________________________________________________
consensus             CCGGTACGATGAAGGGTCATTTACATGGCATGAGTTCTCTAATGCTGTAAAGGAATCTCA
 
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rJMSF036I07+          TGCTGGTCGCATGGGAAACCCAACCCGGAGGTTGGTTATCCCAGACAGACCGAAAGAAGA
rJMSF036J07+          TGCTGGTCGCATGGGAAACCCAACCCGGAGGTTGGTTATCCCAGACAGACCGAAAGAAGA
                      ____________________________________________________________
consensus             TGCTGGTCGCATGGGAAACCCAACCCGGAGGTTGGTTATCCCAGACAGACCGAAAGAAGA
 
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rJMSF036I07+          GGACTATTTCTACGCCAACCCGTGGGAGTGTTTGGAGGATGTAGCAGCAAGAACTAGTTT
rJMSF036J07+          GGACTATTTCTACGCCAACCCGTGGGAGTGTTTGGAGGATGTAGCAGCAAGAACTAGTTT
                      ____________________________________________________________
consensus             GGACTATTTCTACGCCAACCCGTGGGAGTGTTTGGAGGATGTAGCAGCAAGAACTAGTTT
 
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rJMSF036I07+          TTAAGTCCCCGANGGCGCTGGTGGGTTGCGCAATGTATGTATACACACACTACCACTCAC
rJMSF036J07+          TTAAGTCCCCGATGGCGCTGGTGGGTTGCGCAATGTATGTATACACACACTACCACTCAC
                      ____________________________________________________________
consensus             TTAAGTCCCCGATGGCGCTGGTGGGTTGCGCAATGTATGTATACACACACTACCACTCAC
 
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rJMSF036I07+          TGCTGNTGTGCAACAGGTTTAGACAAAAGATTAGGTNTCTGGGAAAGCAGCCACCACGGG
rJMSF036J07+          TGCTGTTGTGCAACAGGTTTAGACAAAAGATTAGGTCTCTGGGAAAGCAGCCACCACGGG
                      ____________________________________________________________
consensus             TGCTGTTGTGCAACAGGTTTAGACAAAAGATTAGGTCTCTGGGAAAGCAGCCACCACGGG
 
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rJMSF036I07+          TGTAGTCCAGTCGGGTGGGGGAGAGACGATCGCACTTCAAATGGTCCTGAAGCGACCCTC
rJMSF036J07+          TGTAGTCCAGTCGGGTGGGGGAGAGACGA-CGCACTTCAAATGGTCCTGAAGCGACCCTC
                      ____________________________________________________________
consensus             TGTAGTCCAGTCGGGTGGGGGAGAGACGATCGCACTTCAAATGGTCCTGAAGCGACCCTC
 
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rJMSF036I07+          CCCGGCAGGCAGGCAGGCAATGCGGAGTATATTTTATTTTAATAAATCCAAAAAAAATTC
rJMSF036J07+          CCCGGCAGGCAGGCAGGCAA-GCGGAGTATATTTTATTTTAATAAATCCAAAAAAAATTC
                      ____________________________________________________________
consensus             CCCGGCAGGCAGGCAGGCAATGCGGAGTATATTTTATTTTAATAAATCCAAAAAAAATTC
 
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rJMSF036I07+          AATGTATACGATGCCGCCCTNCCATTGCAGGGGGGCTATATTNACCGAACTC        
rJMSF036J07+          AATGTATA-GATGCCGCCCTGCCATTGCAGGGGGGCTATATTGACCGAACTCAACGGCTG
                      ____________________________________________________________
consensus             AATGTATACGATGCCGCCCTGCCATTGCAGGGGGGCTATATTGACCGAACTCAACGGCTG