Contig 002928:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009D09Sequence464008111 (9)ref|XP_002268282.1|4e-14PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera751002928 (7)ref|XP_009598546.1|2e-122PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis
JMFF029C11Sequence450008111 (9)ref|XP_009359950.1|9e-13PREDICTED: probable beta-1,3-galactosyltransferase 3 [Pyrus x bretschneideri]737002928 (7)ref|XP_009598546.1|2e-119PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis
JMFF032H10Sequence461008111 (9)ref|XP_002268282.1|2e-14PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera753002928 (7)ref|XP_009598546.1|2e-83PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis
JMFF040I14Sequence451008111 (9)ref|XP_002268282.1|5e-08PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera729002928 (7)gb|KJB80507.1|3e-96hypothetical protein B456_013G101400 [Gossypium raimondii]
JMFF042I11Sequence657008111 (9)ref|XP_009770915.1|1e-77PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]608002928 (7)ref|XP_009770915.1|6e-47PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]
JMSF027H23Sequence330008111 (9)658002928 (7)ref|XP_009775718.1|5e-54PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X2 [Nicotiana sylv
JMSF036G12Sequence594008111 (9)ref|XP_009770915.1|2e-50PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]746002928 (7)ref|XP_009598546.1|4e-69PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis

Alignment

This contig is upended


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rJMFF040I14+                                                                AAAAGT
rJMFF029C11+                                        GCTATGGGATGCAGAGTATTACATAAAAGT
rJMFF009D09+                           CCACTGCTGTTAAGCTATGGGATGCAGAGTATTACATAAAAGT
                      ____________________________________________________________
consensus                              CCACTGCTGTTAAGCTATGGGATGCAGAGTATTACATAAAAGT
 
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rJMFF040I14+          AGATGATGATGTCCATGTAAATATAGGAACACTAGGCGAAACGCTAGCTAGACACCGTAA
rJMFF029C11+          AGATGATGATGTCCATGTAAATATAGGAACACTAGGCGAAACGCTAGCTAGACACCGTAA
rJMFF009D09+          AGATGATGATGTCCATGTAAATATAGGAACACTAGGCGAAACGCTAGCTAGACACCGTAA
                      ____________________________________________________________
consensus             AGATGATGATGTCCATGTAAATATAGGAACACTAGGCGAAACGCTAGCTAGACACCGTAA
 
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rJMFF040I14+          GAAACCCACGAGTGTATATTGGGTGCATGAAATCTGGACCTGTTCTATCTCAGAAGGGAG
rJMFF029C11+          GAAA-CCACGAGTGTATATTGGGTGCATGAAATCTGGACCTGTTCTATCTCAGAAGGGAG
rJMFF009D09+          GAAA-CCACGAGTGTATATTGGGTGCATGAAATCTGGACCTGTTCTATCTCAGAAGGGAG
rJMFF032H10+                                                          CTCAGAAGGGAG
                      ____________________________________________________________
consensus             GAAA-CCACGAGTGTATATTGGGTGCATGAAATCTGGACCTGTTCTATCTCAGAAGGGAG
 
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rJMFF040I14+          TAAGATACCATGAACCTGAGTATTGGAAGTTTGGGGAGACTGGGAACAAATATTTCCGTC
rJMFF029C11+          TAAGATACCATGAACCTGAGTATTGGAAGTTTGGGGAGACTGGGAACAAATATTTCCGTC
rJMFF009D09+          TAAGATACCATGAACCTGAGTATTGGAAGTTTGGGGAGACTGGGAACAAATATTTCCGTC
rJMFF032H10+          TAAGATACCATGAACCTGAGTATTGGAAGTTTGGGGAGACTGGGAACAAATATTTCCGTC
rJMSF036G12+                                            GGAGACTGGGAACAAATATTTCCGTC
                      ____________________________________________________________
consensus             TAAGATACCATGAACCTGAGTATTGGAAGTTTGGGGAGACTGGGAACAAATATTTCCGTC
 
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rJMFF040I14+          ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
rJMFF029C11+          ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
rJMFF009D09+          ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
rJMSF027H23+                           TACGCCATCTCAAAAGACTCGGCTACATATATTTCAGCGAACC
rJMFF032H10+          ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
rJMSF036G12+          ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
                      ____________________________________________________________
consensus             ATGCTACAGGACAATTATACGCCATCTCAAAAGACTTGGCTACATATATTTCAGCGAACC
 
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rJMFF040I14+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
rJMFF029C11+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
rJMFF009D09+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
rJMFF042I11+                   TGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
rJMSF027H23+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGNGGCCTGGTTTATTGGGC
rJMFF032H10+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
rJMSF036G12+          AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
                      ____________________________________________________________
consensus             AACATGTACTGCACAAATATGCTAACGAGGATGTCTCATTGGGGGCCTGGTTTATTGGGC
 
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rJMFF040I14+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMFF029C11+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMFF009D09+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMFF042I11+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMSF027H23+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMFF032H10+          TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
rJMSF036G12+          TAGATGTGCACCACGTAGGTGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
                      ____________________________________________________________
consensus             TAGATGTGCACCACGTAGATGATCGGAGATTATGCTGTGGAACTCCACCTGATTGTGAAT
 
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rJMFF040I14+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
rJMFF029C11+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
rJMFF009D09+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
rJMFF042I11+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
rJMSF027H23+          NGAAGGCTCAGGCGGGCAACATNTGCGTNGCTTCATTNGACTGGACGTGCAGCGGGATAT
rJMFF032H10+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
rJMSF036G12+          GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
                      ____________________________________________________________
consensus             GGAAGGCTCAGGCGGGCAACATTTGCGTTGCTTCATTTGACTGGACGTGCAGCGGGATAT
 
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rJMFF040I14+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMFF029C11+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMFF009D09+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMFF042I11+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMSF027H23+          GCAGGNCAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMFF032H10+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
rJMSF036G12+          GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
                      ____________________________________________________________
consensus             GCAGGACAGTTGACAGGATAAAGGAAGTCCACAGGCGGTGTGGCGAGGGAGAGAAAGTCC
 
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rJMFF040I14+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
rJMFF029C11+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
rJMFF009D09+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
rJMFF042I11+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
rJMSF027H23+          TGTGGAATGCTGCTTTCTGAANCTGGCTGGCANGGCGTTTNTTCCAACCTCTGGAAGATG
rJMFF032H10+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
rJMSF036G12+          TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
                      ____________________________________________________________
consensus             TGTGGAATGCTGCTTTCTGAAACTGGCTGGCATGGCGTTTCTTCCAACCTCTGGAAGATG
 
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rJMFF040I14+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
rJMFF029C11+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
rJMFF009D09+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
rJMFF042I11+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
rJMSF027H23+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTNTATATTTCTATAGGTTGA
rJMFF032H10+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
rJMSF036G12+          CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
                      ____________________________________________________________
consensus             CAAAACTGGCAGGGCGGGCTCACCGGACCTGCATTTCTGTTCTATATTTCTATAGGTTGA
 
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rJMFF040I14+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMFF029C11+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMFF009D09+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMFF042I11+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMSF027H23+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMFF032H10+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
rJMSF036G12+          AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
                      ____________________________________________________________
consensus             AGATATAAAATAGCGATACCCATGGAGAGAAAGAGGGAGAGATAGGTGAACAGAAAGAGG
 
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rJMFF040I14+          GC                                                          
rJMFF029C11+          GC                                                          
rJMFF009D09+          GC                                                          
rJMFF042I11+          GCTTAGCGGCTGTGCAGATGTTCTCCATTTTAGTAGACGAGAGTGTCTCTGCCAAAGCGG
rJMSF027H23+          GCTTAGCGGCTGTGCAGATGTTCTCCATTTTAGTAGNCGAGAGTGTCTCTGCCAAAGCGG
rJMFF032H10+          GCTTAGCGGCTGTGCAGATGTTCTCCATTTTAGTAGACGAGAGTGTCTCTGCCAAAGCGG
rJMSF036G12+          GCTTAGCGGCTGTGCAGATGTTCTCCATTTTAGTAGACGAGAGTGTCTCTGCCAAAGCGG
                      ____________________________________________________________
consensus             GCTTAGCGGCTGTGCAGATGTTCTCCATTTTAGTAGACGAGAGTGTCTCTGCCAAAGCGG
 
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rJMFF042I11+          CCATGAAAACGCAGGCAGGCGACTCTCACTGCTAGCTTTTTTTGGTCTTGTTTTCCCACC
rJMSF027H23+          CCATGAAAACGCAGGCAGGCGACTCTCACTGCTAGCTTTTTTTGGTCTTGTTTTCCCACC
rJMFF032H10+          CCATGAAAACGCAGGCAGGCGACTCTCACTGCTAGCTTTTTTTGGTCTTGTTTTCCCACC
rJMSF036G12+          CCATGAAAACGCAGGCAGGCGACTCTCACTGCTAGCTTTTTTTGGTCTTGTTTTCCCACC
                      ____________________________________________________________
consensus             CCATGAAAACGCAGGCAGGCGACTCTCACTGCTAGCTTTTTTTGGTCTTGTTTTCCCACC
 
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rJMFF042I11+          CTTTGCCGAGCAGGCAAAATTGTAAGTGATGCTCGATGGATTATAATGTGCATTCTTAAT
rJMSF027H23+          CTTTGCCGAGCAGGCAAAATCGTAAGTGATGCTCGATGGANTATAATGNGCATTCTTAAT
rJMFF032H10+          CTTTGCCGAGCAGGCAAAATTGTAAGTGATGCTCGATGGATTATAATGTGCATTCTTAAT
rJMSF036G12+          CTTTGCCGAGCAGGCAAAATTGTAAGTGATGCTCGATGGATTATAATGTGCATTCTTAAT
                      ____________________________________________________________
consensus             CTTTGCCGAGCAGGCAAAATTGTAAGTGATGCTCGATGGATTATAATGTGCATTCTTAAT
 
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rJMFF042I11+          AAGTGCAGATCAAT                                              
rJMSF027H23+          AAGTGCAGATCAAT                                              
rJMFF032H10+          AAGTGCAGATCAAT                                              
rJMSF036G12+          AAGTGCAGATCAATAATATATATTGCAGTGCCAGTGAGCCCTTGCACACAAGAATTGAAG
                      ____________________________________________________________
consensus             AAGTGCAGATCAATAATATATATTGCAGTGCCAGTGAGCCCTTGCACACAAGAATTGAAG