| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011C10 | Sequence | 605 | 002927 (5) | ref|XP_009621410.1| | 1e-31 | PREDICTED: F-box protein At2g16365 [Nicotiana tomentosiformis] ref|XP_009621411. | 741 | 002927 (5) | ref|XP_009621410.1| | 3e-37 | PREDICTED: F-box protein At2g16365 [Nicotiana tomentosiformis] ref|XP_009621411. |
| JMFS087F01 | Sequence | 624 | 002927 (5) | ref|XP_009621410.1| | 1e-40 | PREDICTED: F-box protein At2g16365 [Nicotiana tomentosiformis] ref|XP_009621411. | |||||
| JMSF036D07 | Sequence | 631 | 011786 (9) | ref|XP_009766501.1| | 2e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | 704 | 002927 (5) | ref|XP_009621410.1| | 5e-07 | PREDICTED: F-box protein At2g16365 [Nicotiana tomentosiformis] ref|XP_009621411. |
| JMSF036E23 | Sequence | 636 | 011786 (9) | ref|XP_009766501.1| | 2e-05 | PREDICTED: F-box protein At2g16365-like [Nicotiana sylvestris] ref|XP_009766502. | 690 | 002927 (5) | ref|XP_008236916.1| | 2e-04 | PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X2 [Prunus |
This contig is upended
. : . : . : . : . : . :
JMFF011C10- AACATTTCCAAACAGA
____________________________________________________________
consensus AACATTTCCAAACAGA
. : . : . : . : . : . :
JMFF011C10- ATCAAACTGTTGGTACTTCAAGAACATCTAATGAATTCAATAATTTCAACAACTTGTCTC
____________________________________________________________
consensus ATCAAACTGTTGGTACTTCAAGAACATCTAATGAATTCAATAATTTCAACAACTTGTCTC
. : . : . : . : . : . :
JMFF011C10- CTTTTTTGGGTCAGAATCAGCAAGGTGTGAAGCTTCAACTTCTAGATAGCTCCACAGCTA
____________________________________________________________
consensus CTTTTTTGGGTCAGAATCAGCAAGGTGTGAAGCTTCAACTTCTAGATAGCTCCACAGCTA
. : . : . : . : . : . :
JMFF011C10- GTGAGCATGAAGAAGATACTGGAAATACTGAGCCTTCTGAAGTTGAAGCAAAGAACGAAT
____________________________________________________________
consensus GTGAGCATGAAGAAGATACTGGAAATACTGAGCCTTCTGAAGTTGAAGCAAAGAACGAAT
. : . : . : . : . : . :
JMFF011C10- CATCAGCTGAAACTGATACTATGGATATGGATGTCTTTCCAGGAAAGGCCCATCTTTTAG
____________________________________________________________
consensus CATCAGCTGAAACTGATACTATGGATATGGATGTCTTTCCAGGAAAGGCCCATCTTTTAG
. : . : . : . : . : . :
JMFF011C10- ATTCTAATTCTTCCCCATTAAAGAAGGCACCTGAAAGAGACCAATATTTACCCCAACTTA
____________________________________________________________
consensus ATTCTAATTCTTCCCCATTAAAGAAGGCACCTGAAAGAGACCAATATTTACCCCAACTTA
. : . : . : . : . : . :
JMFF011C10- CAATTGGTTCCCCCATGGCACTTGTTGAATCTGAAGGCACAAAGAACAGGCTACCTGATA
JMFS087F01- GCACTTGTTGAATCTGAAGGCACAAAGAACAGGCTACCTGATA
____________________________________________________________
consensus CAATTGGTTCCCCCATGGCACTTGTTGAATCTGAAGGCACAAAGAACAGGCTACCTGATA
. : . : . : . : . : . :
JMFF011C10- TGAACTTACAGTTTCCTGCTGTACCAGCTGAAGTAACTCCGACAGAACAATTGGAGCAGA
JMFS087F01- TGAACTTACAGTTTCCTGCTGTACCAGCTGAAGTAACTCCGACAGAACAATTGGAGCAGA
____________________________________________________________
consensus TGAACTTACAGTTTCCTGCTGTACCAGCTGAAGTAACTCCGACAGAACAATTGGAGCAGA
. : . : . : . : . : . :
JMFF011C10- GTTCAAAAACTCAAAGTTTGGATATGGAATCACTCCTGGCTCAAGCTGATCAGCCAAGTA
JMFS087F01- GTTCAAAAACTCAAAGTTTGGATATGGAATCACTCCTGGCTCAAGCTGATCAGCCAAGTA
____________________________________________________________
consensus GTTCAAAAACTCAAAGTTTGGATATGGAATCACTCCTGGCTCAAGCTGATCAGCCAAGTA
. : . : . : . : . : . :
JMFF011C10- CTTCAAAACCTGATCTGTCTCCACTCAATCTTCTTCTAGGACCAGAGCCAAGTAGCAGAT
JMFS087F01- CTTCAAAACCTGATCTGTCTCCACTCAATCTTCTTCTAGGACCAGAGCCAAGTAGCAGAT
rJMFF011C10+ TAGGACCAGAGCCAAGTAGCAGAT
____________________________________________________________
consensus CTTCAAAACCTGATCTGTCTCCACTCAATCTTCTTCTAGGACCAGAGCCAAGTAGCAGAT
. : . : . : . : . : . :
JMFF011C10- GGGTGAAGCGTTTGAAACTGAGTAATCATGATGCTGGGCTTGCTCTTGG
JMFS087F01- GGGTGAAGCGTTTGAAACTGAGTAATCATGATGCTGGGCTTGCTCTTGGTACAATGAGTT
rJMFF011C10+ GGGTGAAGCGTTTGAAACTGAGTAATCATGATGCTGGGCTTGCTCTTGGTACAATGAGTT
____________________________________________________________
consensus GGGTGAAGCGTTTGAAACTGAGTAATCATGATGCTGGGCTTGCTCTTGGTACAATGAGTT
. : . : . : . : . : . :
JMFS087F01- CAAACTCGAAAGAAGATTCATCTTATGAGAAGTACAGGTTCCGTGGCAAAACTACCCAAG
rJMFF011C10+ CAAACTCGAAAGAAGATTCATCTTATGAGAAGTACAGGTTCCGTGGCAAAACTACCCAAG
____________________________________________________________
consensus CAAACTCGAAAGAAGATTCATCTTATGAGAAGTACAGGTTCCGTGGCAAAACTACCCAAG
. : . : . : . : . : . :
JMFS087F01- GTGGCATAACTAGCTCTGGACCAATGACTAGTAAAAATCAAGGTAAGGACTTGATAGCTC
rJMFF011C10+ GTGGCATAACTAGCTCTGGACCAATGACTAGTAAAAATCAAGGTAAGGACTTGATAGCTC
____________________________________________________________
consensus GTGGCATAACTAGCTCTGGACCAATGACTAGTAAAAATCAAGGTAAGGACTTGATAGCTC
. : . : . : . : . : . :
JMFS087F01- AGGATAATTGTGCAGGCATAACTGGGAATCCTGAGTCCTATTCTGCAGACAGAGAGCTAT
rJMFF011C10+ AGGATAATTGTGCAGGCATAACTGGGAATCCTGAGTCCTATTCTGCAGACAGAGAGCTAT
____________________________________________________________
consensus AGGATAATTGTGCAGGCATAACTGGGAATCCTGAGTCCTATTCTGCAGACAGAGAGCTAT
. : . : . : . : . : . :
JMFS087F01- TAACGTCACACTCCTGGATTCAGAGGTTGCTTCGAAATAGATCTATCACCATGCCGAAGA
rJMFF011C10+ TAACGTCACACTCCTGGATTCAGAGGTTGCTTCGAAATAGAGCTATCACCATGCCGAAGA
____________________________________________________________
consensus TAACGTCACACTCCTGGATTCAGAGGTTGCTTCGAAATAGATCTATCACCATGCCGAAGA
. : . : . : . : . : . :
JMFS087F01- AGCCTGAAGTTGTGGTTTGTGAGCCACAGAGCTCAAAATTGGTGGTACCTCCTGAGCAAC
rJMFF011C10+ AGCCTGAAGTTGTGGTTTGTGAGCCACAGAGCTCAAAATTGGTGGTACCTCCTGAGCAAC
rJMSF036D07+ TTGTGAGCCACAGAGCTCAAAATTGGTGGTACCTCCTGAGCAAC
rJMSF036E23+ GCTCAAAATTGGTGGTACCTCCTGAGCAAC
____________________________________________________________
consensus AGCCTGAAGTTGTGGTTTGTGAGCCACAGAGCTCAAAATTGGTGGTACCTCCTGAGCAAC
. : . : . : . : . : . :
JMFS087F01- TCGAGAAAAAACAGTTTCCCAGCATAGCTGCCATGGCATTA
rJMFF011C10+ TCGAGAAAAAACAGTTTCCCAGCATAGCTGCCATGGCATTAATGGGAAAGGCCATGAAGG
rJMSF036D07+ TCGAAAAAAAACAGTTTCCCAGCATAGCTGCCATGGCATTAATGGGAAAGGCCATGAAGG
rJMSF036E23+ TCGAGAAAAAACAGTTTCCCAGCATAGCTGCCATGGCATTAATGGGAAAGGCCATGAAGG
____________________________________________________________
consensus TCGAGAAAAAACAGTTTCCCAGCATAGCTGCCATGGCATTAATGGGAAAGGCCATGAAGG
. : . : . : . : . : . :
rJMFF011C10+ GCTTCCAGCCATGTGAGTTCCAGAGGAAGGGTCCTTTTGTTGTTTGGAATACTAATGGCT
rJMSF036D07+ GCTTCCAGCCATGTGAGTTCCAGAGGAAGGGTCCTTTTGTTGTTTGGAATACTAATGGCT
rJMSF036E23+ GCTTCCAGCCATGTGAGTTCCAGAGGAAGGGTCCTTTTGTTGTTTGGAATACTAATGGCT
____________________________________________________________
consensus GCTTCCAGCCATGTGAGTTCCAGAGGAAGGGTCCTTTTGTTGTTTGGAATACTAATGGCT
. : . : . : . : . : . :
rJMFF011C10+ CCTGAAAACACTTCCTATATGGTAATTCACGCTGGTAGCGTTCTGCCACACGCTGACCAT
rJMSF036D07+ CCTGAAAACACTTCCTATATGGTAATTCACGCTGGTAGCGTTCTGCCACACGCTGACCAT
rJMSF036E23+ CCTGAAAACACTTCCTATATGGTAATTCACGCTGGTAGCGTTCTGCCACACGCTGACCAT
____________________________________________________________
consensus CCTGAAAACACTTCCTATATGGTAATTCACGCTGGTAGCGTTCTGCCACACGCTGACCAT
. : . : . : . : . : . :
rJMFF011C10+ GAGCGATGGTCCATAGCTGAATAACGCTGACCTGGGCCCATTTAGCGCTTGTATAATCAA
rJMSF036D07+ GAGCGATGGTCCATAGCTGAATAACGCTGACCTGGGCCCATTTAGCGCTTGTATAATCAA
rJMSF036E23+ GAGCGATGGTCCATAGCTGAATAACGCTGACCTGGGCCCATTTAGCGCTTGTATAATCAA
____________________________________________________________
consensus GAGCGATGGTCCATAGCTGAATAACGCTGACCTGGGCCCATTTAGCGCTTGTATAATCAA
. : . : . : . : . : . :
rJMFF011C10+ GCAATCAGG
rJMSF036D07+ GCAATCAGGGGCGCTACTTGTCTGGCTGCTCACTGTACGAGAGCAATCGATTTTTACAGT
rJMSF036E23+ GCAATCAGGGGCGCTACTTGTCTGGCTGCTCACTGTACGAGAGCAATCGATTTTTACAGT
____________________________________________________________
consensus GCAATCAGGGGCGCTACTTGTCTGGCTGCTCACTGTACGAGAGCAATCGATTTTTACAGT
. : . : . : . : . : . :
rJMSF036D07+ AATGAGTGAGTTAATGGATGTTATGCATGAGTGAGACGACGATGGATACTAGTGTCTCGA
rJMSF036E23+ AATGAGTGAGTTAATGGATGTTATGCATGAGTGAGACGACGATGGATACTAGTGTCTCGA
____________________________________________________________
consensus AATGAGTGAGTTAATGGATGTTATGCATGAGTGAGACGACGATGGATACTAGTGTCTCGA
. : . : . : . : . : . :
rJMSF036D07+ GATCCAAATGAACTCTGCACTTTCAAGTGAACAGCCTCAGTTCTTGCTGGACTTTCATAC
rJMSF036E23+ GATCCAAATGAACTCTGCACTTTCAAGTGAACAGCCTCAGTTCTTGCTGGACTTTCATAC
____________________________________________________________
consensus GATCCAAATGAACTCTGCACTTTCAAGTGAACAGCCTCAGTTCTTGCTGGACTTTCATAC
. : . : . : . : . : . :
rJMSF036D07+ ACACATTCTTCTCTCTTCAGCCTTGTTAGGGGGAAGATGGAGTTGCAGAGGCATCCAACC
rJMSF036E23+ ACACATTCTTCTCTCTTCAGCCTTGTTAGGGGGAAGATGGAGTTGCAGAGGCATCCAACC
____________________________________________________________
consensus ACACATTCTTCTCTCTTCAGCCTTGTTAGGGGGAAGATGGAGTTGCAGAGGCATCCAACC
. : . : . : . : . : . :
rJMSF036D07+ ATGAAAACACTTATCAATTCAGTGGACTCATATTCTTATTTGCATCACACTCCTTTTTTT
rJMSF036E23+ ATGAAAACACTTATCAATTCAGTGGACTCATATTCTTATTTGCATCACACTCCTTTTTTT
____________________________________________________________
consensus ATGAAAACACTTATCAATTCAGTGGACTCATATTCTTATTTGCATCACACTCCTTTTTTT
. : . : . : . : . : . :
rJMSF036D07+ CTTTTTCCTTAATAATGCACTATGGATGTGACTTCAAATAGTAATCTTTCATTATAGGAT
rJMSF036E23+ CTTTTTCCTTAATAATGCACTATGGATGTGACTTCAAATAGTAATCTTTCATTATAGGAT
____________________________________________________________
consensus CTTTTTCCTTAATAATGCACTATGGATGTGACTTCAAATAGTAATCTTTCATTATAGGAT
. : . : . : . : . : . :
rJMSF036D07+ TTACGTTAGTTTTCATCACATGTATTTATATGCCACTCTGCTTTTCCT
rJMSF036E23+ TTACGTTAGTTTTCATCACATGTATTTATATGCCACTCTGCTTTTCCTAAAACTGCAAAT
____________________________________________________________
consensus TTACGTTAGTTTTCATCACATGTATTTATATGCCACTCTGCTTTTCCTAAAACTGCAAAT