Contig 002924:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046N14+                                                             GACAGGAAG
                      ____________________________________________________________
consensus                                                                GACAGGAAG
 
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rJMSF046N14+          AAACCNTTCGCCCCGTGGGTATCCTTCACTACATAGACCCGGGCTGGTAAATGTGGCTGT
                      ____________________________________________________________
consensus             AAACCNTTCGCCCCGTGGGTATCCTTCACTACATAGACCCGGGCTGGTAAATGTGGCTGT
 
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rJMSF046N14+          TGCGTTTATCGGCCTCGATACTTTTTGGAAGGGAACCTACACCGATCTTCAGATGTCAGA
rJMSF035G02+                                                        CTTCAGATGTCAGA
                      ____________________________________________________________
consensus             TGCGTTTATCGGCCTCGATACTTTTTGGAAGGGAACCTACACCGATCTTCAGATGTCAGA
 
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rJMSF046N14+          AGCGTACTGTGTTGGCCAGTTCGTGAAGCTGAAGTCTGACGTCTTTAGCCCTCGATTCGA
rJMSF035G02+          AGCGTACTGTGTTGGCCAGTTCGTGAAGCTGAAGTCTGACGTCTTTAGCCCTCGATTCGA
                      ____________________________________________________________
consensus             AGCGTACTGTGTTGGCCAGTTCGTGAAGCTGAAGTCTGACGTCTTTAGCCCTCGATTCGA
 
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rJMSF046N14+          ATGGCCTCGGAAACGAGGTTGCGAGTGGGCTACAGGTCGGGTTTGCCAAGTGCTACCAAA
rJMSF035G02+          ATGGCCTCGGAAACGAGGTTGCGAGTGGGCTACAGGTCGGGTTTGCCAAGTGCTACCAAA
                      ____________________________________________________________
consensus             ATGGCCTCGGAAACGAGGTTGCGAGTGGGCTACAGGTCGGGTTTGCCAAGTGCTACCAAA
 
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rJMSF046N14+          TGGTTGTCTTGCTGTTAACTTCCCGGGAAGATTGACATTCGGGGAGGAACGTAATAACAA
rJMSF035G02+          TGGTTGTCTTGCTGTTAACTTCCCGGGAAGATTGACATTCGGGGAGGAACGTAATAACAA
                      ____________________________________________________________
consensus             TGGTTGTCTTGCTGTTAACTTCCCGGGAAGATTGACATTCGGGGAGGAACGTAATAACAA
 
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rJMSF046N14+          CTCCTTGGCTGATCCAGCTGAGGTTGAACTCGTTTCTTTTAATACTTGCCCGAGCATGGT
rJMSF035G02+          CTCCTTGGCTGATCCAGCTGAGGTTGAACTCGTTTCTTTTAATACTTGCCCGAGCATGGT
                      ____________________________________________________________
consensus             CTCCTTGGCTGATCCAGCTGAGGTTGAACTCGTTTCTTTTAATACTTGCCCGAGCATGGT
 
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rJMSF046N14+          GAAGAAATATCAGCATCTCGAGGACTTTCACTGGGCCGTGAGGCCAATTCTCATCGCAAT
rJMSF052A10+                                         TGGGCCGTGAGGCCAATTNTCATCNCAAT
rJMSF035G02+          GAAGAAATATCAGCATCTCGAGGACTTTCACTGGGCCGTGAGGCCAATTCTCATCGCAAT
                      ____________________________________________________________
consensus             GAAGAAATATCAGCATCTCGAGGACTTTCACTGGGCCGTGAGGCCAATTCTCATCGCAAT
 
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rJMSF046N14+          GGGCTTATTCACCGCCATGAAGATGGGACTTCTCGTCGGGAAGAAGATCGGGAGGGCAAA
rJMSF052A10+          GGGCTTANTCACCGCCANGAAGATGGGACTTCTNGTNGGGAAGNAGNTNGGGAGGGCAAA
rJMSF035G02+          GGGCTTATTCACCGCCATGAAGATGGGACTTCTCGTCGGGAAGAAGATCGGGAGGGCAAA
                      ____________________________________________________________
consensus             GGGCTTATTCACCGCCATGAAGATGGGACTTCTCGTCGGGAAGAAGATCGGGAGGGCAAA
 
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rJMSF046N14+          GTGCAGGAAGGGACGCAATCCCACGATACAAGTTGAGCATCAACGCGGAGAGGGGAAAAC
rJMSF052A10+          GTGCAGGAAGGGACNCAATCCCNCGATACAAGNTGNGCATCAACGNGGNGAGGGGAAAAC
rJMSF035G02+          GTGCAGGAAGGGACGCAATCCCACGATACAAGTTGAGCATCAACGCGGAGAGGGGAAAAC
                      ____________________________________________________________
consensus             GTGCAGGAAGGGACGCAATCCCACGATACAAGTTGAGCATCAACGCGGAGAGGGGAAAAC
 
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rJMSF046N14+          TTCTGGCTCAGCGTGGCTTCCTCCAAAGATGGCGAACGTGATCTTCAGAGATGGCGTCAC
rJMSF052A10+          TTNTGGCTCAGCGTGGCTTCCTCCAAAGATGGCGAACGNGATNNTCAGAGANGGCGTCAC
rJMSF035G02+          TTCTGGCTCAGCGTGGCTTCCTCCAAAGATGGCGAACGTGATCTTCAGAGATGGCGTCAC
                      ____________________________________________________________
consensus             TTCTGGCTCAGCGTGGCTTCCTCCAAAGATGGCGAACGTGATCTTCAGAGATGGCGTCAC
 
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rJMSF046N14+          CATAACAACCTCGCGGTAATCCTCTCGAGCTCTCATTGCCATCTTCTCAAGATGAATGCC
rJMSF052A10+          CATAACAACCNCGCGGTAATCCTC                                    
rJMSF035G02+          CATAACAACCTCGCGGTAATCCTCTCGAGCTCTCATTGCCATCTTCTCAAGATGAATGCC
                      ____________________________________________________________
consensus             CATAACAACCTCGCGGTAATCCTCTCGAGCTCTCATTGCCATCTTCTCAAGATGAATGCC
 
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rJMSF046N14+          AATTGTGAAGGTGAAGGTAGTTGAGGTTAGCATGATTTCTGGTATGTTTATTTACCAGTT
rJMSF035G02+          AATTGTGAAGGTGAAGGTAGTTGAGGTTAGCATGATTTCTGGTATGTTTATTTACCAGTT
                      ____________________________________________________________
consensus             AATTGTGAAGGTGAAGGTAGTTGAGGTTAGCATGATTTCTGGTATGTTTATTTACCAGTT
 
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rJMSF046N14+          ATTGTAAGTATGGTTGTAAATTATGGCACTTAGTTATTTTATGT                
rJMSF035G02+          ATTGTAAGTATGGTTGTAAATTATGGCACATAGTTATTTTATGTTCTCTATTGCCACCTT
                      ____________________________________________________________
consensus             ATTGTAAGTATGGTTGTAAATTATGGCACTTAGTTATTTTATGTTCTCTATTGCCACCTT