Contig 002922:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF015D16-                                                                      G
                      ____________________________________________________________
consensus                                                                        G
 
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JMFF015D16-           TTTTTGACTCTTGTAGTGTACGATTGTGAAAATATCGGACAGTGACGCGATGTCGTCTTC
JMSF034J15-                GACTCTTGTAGTGTACGATTGTGAAAATATCGGACAGTGACGCGATGTCGTCTTC
                      ____________________________________________________________
consensus             TTTTTGACTCTTGTAGTGTACGATTGTGAAAATATCGGACAGTGACGCGATGTCGTCTTC
 
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JMFF015D16-           TTTCAATGACGCTTTCTATCAATTCGGCGCCGACTCGCCCAACGCTTCGAATCCTCCATT
JMSF034J15-           TTTCAATGACGCTTTCTATCAATTCGGCGCCGACTCGCCCAACGCTTCGAATCCTCCATT
                      ____________________________________________________________
consensus             TTTCAATGACGCTTTCTATCAATTCGGCGCCGACTCGCCCAACGCTTCGAATCCTCCATT
 
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JMFF015D16-           CCACGATGGTTTCCTGAATCCGCCTGCTGACGACGGCTCGCGGATCTATGTTTCGCCGCC
JMSF034J15-           CCACGATGGTTTCCTGAATCCGCCTGCTGACGACGGCTCGCGGATCTATGTTTCGCCGCC
rJMFF015D16+                                                              TCGCCGCC
rJMSF034J15+                                                              TCGCCGCC
                      ____________________________________________________________
consensus             CCACGATGGTTTCCTGAATCCGCCTGCTGACGACGGCTCGCGGATCTATGTTTCGCCGCC
 
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JMFF015D16-           AGCTCAGCACACTTCATTTCCACCGCCAATCTACGCTTCTGGAGACTCCGATCCGGAAGA
JMSF034J15-           AGCTCAGCACACTTCATTTCCACCGCCAATCTACGCTTCTGGAGACTCCGATCCGGAAGA
rJMFF015D16+          AGCTCAGCACACTTCATTTCCACCGCCAATCTACGCTTCTGGAGACTCCGATCCGGAAGA
rJMSF034J15+          AGCTCAGCACACTTCATTTCCACCGCCAATCTACGCTTCTGGAGACTCCGATCCGGAAGA
                      ____________________________________________________________
consensus             AGCTCAGCACACTTCATTTCCACCGCCAATCTACGCTTCTGGAGACTCCGATCCGGAAGA
 
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JMFF015D16-           TGAGAAGCCGTTCGTAGATGCTTTTGCGACGCCTAATGCACCAGTTCTGCCGCCGCCATC
JMSF034J15-           TGAGAAGCCGTTCGTAGATGCTTTTGCGACGCCTAATGCACCAGTTCTGCCGCCGCCATC
rJMFF015D16+          TGAGAAGCCGTTCGTAGATGCTTTTGCGACGCCTAATGCACCAGTTCTGCCGCCGCCATC
rJMSF034J15+          TGAGAAGCCGTTCGTAGATGCTTTTGCGACGCCTAATGCACCAGTTCTGCCGCCGCCATC
                      ____________________________________________________________
consensus             TGAGAAGCCGTTCGTAGATGCTTTTGCGACGCCTAATGCACCAGTTCTGCCGCCGCCATC
 
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JMFF015D16-           GGAAATGCAAGAGGAAGGATTTGCTCTCAGGGAATGGAGAAGACAAAATGCTCTTCAACT
JMSF034J15-           GGAAATGCAAGAGGAAGGATTTGCTCTCAGGGAATGGAGAAGACAAAATGCTCTTCAACT
rJMFF015D16+          GGAAATGCAAGAGGAAGGATTTGCTCTCAGGGAATGGAGAAGACAAAATGCTCTTCAACT
rJMSF034J15+          GGAAATGCAAGAGGAAGGATTTGCTCTCAGGGAATGGAGAAGACAAAATGCTCTTCAACT
                      ____________________________________________________________
consensus             GGAAATGCAAGAGGAAGGATTTGCTCTCAGGGAATGGAGAAGACAAAATGCTCTTCAACT
 
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JMFF015D16-           AGAGGAGAAGGAGAAGAGAGAGAAAGAGGTATTGAGCCAAATCATTGATGAAGCTGATGG
JMSF034J15-           AGAGGAGAAGGAGAAGAGAGAGAAAGAGGTATTGAGCCAAATCATTGATGAAGCTGATGG
rJMFF015D16+          AGAGGAGAAGGAGAAGAGAGAGAAAGAGGTATTGAGCCAAATCATTGATGAAGCTGATGG
rJMSF034J15+          AGAGGAGAAGGAGAAGAGAGAGAAAGAGGTATTGAGCCAAATCATTGATGAAGCTGATGG
                      ____________________________________________________________
consensus             AGAGGAGAAGGAGAAGAGAGAGAAAGAGGTATTGAGCCAAATCATTGATGAAGCTGATGG
 
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JMFF015D16-           CTATAAAGTTGAATTTTACAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
JMSF034J15-           CTATAAAGTTGAATTTTACAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
rJMFF004C04+                            CAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
rJMFF015D16+          CTATAAAGTTGAATTTTACAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
rJMSF034J15+          CTATAAAGTTGAATTTTACAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
                      ____________________________________________________________
consensus             CTATAAAGTTGAATTTTACAAGAAGAGAGAGGTTAAGATGGAAGCAAACAAGGCCACCTG
 
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JMFF015D16-           CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
JMSF034J15-           CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
rJMFF004C04+          CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
rJMFF015D16+          CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
rJMSF034J15+          CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
                      ____________________________________________________________
consensus             CCGCGAGAAGGAGAAAATATTCTTGGCCAGCCATGAGAAGTTCCATGCTGAAGCCGACAA
 
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JMFF015D16-           GCATTATTGGAAG                                               
JMSF034J15-           GCATTATTGGAAGGCGATTTCAGAGCTTATTCCTAATGAAGTTCCAACGATAGTAAAGAA
rJMFF004C04+          GCATTATTGGAAGGCGATTTCAGAGCTTATTCCTAATGAAGTTCCAACGATAGTAAAGAA
rJMFF015D16+          GCATTATTGGAAGGCGATTTCAGAGCTTATTCCTAATGAAGTTCCAACGATAGTAAAGAA
rJMSF034J15+          GCATTATTGGAAGGCGATTTCAGAGCTTATTCCTAATGAAGTTCCAACGATAGTAAAGAA
                      ____________________________________________________________
consensus             GCATTATTGGAAGGCGATTTCAGAGCTTATTCCTAATGAAGTTCCAACGATAGTAAAGAA
 
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JMSF034J15-           AGGGAAGAAGGATCAAGAGAAGAAACCTTCCATTGCTGTGATCCAAGGTCCAAAGCCT  
rJMFF004C04+          AGGGAAGAAGGATCAAGAGAAGAAACCTTCCATTGCTGTGATCCAAGGTCCAAAGCCTGG
rJMFF015D16+          AGGGAAGAAGGATCAAGAGAAGAAACCTTCCATTGCTGTGATCCAAGGTCCAAAGCCTGG
rJMSF034J15+          AGGGAAGAAGGATCAAGAGAAGAAACCTTCCATTGCTGTGATCCAAGGTCCAAAGCCTGG
                      ____________________________________________________________
consensus             AGGGAAGAAGGATCAAGAGAAGAAACCTTCCATTGCTGTGATCCAAGGTCCAAAGCCTGG
 
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rJMFF004C04+          AAAACCCACAGAGCTATCAAGGATGCGGCAGATACTTTTAAAGCTTAAGCATGACACACC
rJMFF015D16+          AAAACCCACAGAGCTATCAAGGATGCGGCAGATACTTTTAAAGCTTAAGCATGACACACC
rJMSF034J15+          AAAACCCACAGAGCTATCAAGGATGCGGCAGATACTTTTAAAGCTTAAGCATGACACACC
                      ____________________________________________________________
consensus             AAAACCCACAGAGCTATCAAGGATGCGGCAGATACTTTTAAAGCTTAAGCATGACACACC
 
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rJMFF004C04+          ATTGCACCTTAAGCCATCTCCATCACCCACTGCCACCGAGGATGCAAATATTGGTACTGC
rJMFF015D16+          ATTGCACCTTAAGCCATCTCCATCACCCACTGCCACCGAGGATGCAAATATTGGTACTGC
rJMSF034J15+          ATTGCACCTTAAGCCATCTCCATCACCCACTGCCACCGAGGATGCAAATATTGGTACTGC
                      ____________________________________________________________
consensus             ATTGCACCTTAAGCCATCTCCATCACCCACTGCCACCGAGGATGCAAATATTGGTACTGC
 
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rJMFF004C04+          TACACCTGCTGCGGCTGTCACCACCAAGCCCGTTGCTGTTGCTTGATAGTATTATGTTTT
rJMFF015D16+          TACACCTGCTGCGGCTGTCACCACCAAGCCCGTTGCTGTTGCTTGATAGTATTATGTTTT
rJMSF034J15+          TACACCTGCTGCGGCTGTCACCACCAAGCCCGTTGCTGTTGCTTGATAGTATTATGTTTT
                      ____________________________________________________________
consensus             TACACCTGCTGCGGCTGTCACCACCAAGCCCGTTGCTGTTGCTTGATAGTATTATGTTTT
 
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rJMFF004C04+          AAAGACTTGACACCATACCCTCTCTTTGTTTTACATTTCGTATA                
rJMFF015D16+          AAAGACTTGACACCATACCCTCTCTTTGTTTTACATTTCGTATAAA              
rJMSF034J15+          AAAGACTTGACACCATACCCTCTCCTTGTTTTACATTTCGTATAGAATATGTACCATGTT
                      ____________________________________________________________
consensus             AAAGACTTGACACCATACCCTCTCTTTGTTTTACATTTCGTATAGAATATGTACCATGTT