Contig 002920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034E22Sequence687005305 (3)ref|XP_006355235.1|2e-91PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chl571002920 (2)emb|CDP18075.1|2e-65unnamed protein product [Coffea canephora]
JMSF049O21Sequence689005305 (3)ref|XP_006355235.1|6e-56PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chl663002920 (2)emb|CDP18075.1|4e-95unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF049O21+                                       GTATCCCAGAGAGGTTTTCTCNTGTTATTCG
                      ____________________________________________________________
consensus                                          GTATCCCAGAGAGGTTTTCTCNTGTTATTCG
 
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rJMSF049O21+          TTCTCTATTGACTCAAGAAGGCATCTGTTTGACATTGGAGCCAGGTTTCAAATTTCTTGA
                      ____________________________________________________________
consensus             TTCTCTATTGACTCAAGAAGGCATCTGTTTGACATTGGAGCCAGGTTTCAAATTTCTTGA
 
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rJMSF049O21+          GGTTGCGTATCCTTATGTTGCGAAGCGCCTTCTTACAGATCCTAACCCTGCTTTACGGGA
rJMSF034E22+                                          TTACAGATCCTAACCCTGCTTTACGGGA
                      ____________________________________________________________
consensus             GGTTGCGTATCCTTATGTTGCGAAGCGCCTTCTTACAGATCCTAACCCTGCTTTACGGGA
 
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rJMSF049O21+          ACGCCTTATACAGGTTTTATTCAAGGATGGTGTNTTCCNGTGGAAACGGCTCGAGAATNT
rJMSF034E22+          ACGCCTTATACAGGTTTTATTCAAGGATGGTGTCTTCCAGTGGAAACGGCTCGAGAATTT
                      ____________________________________________________________
consensus             ACGCCTTATACAGGTTTTATTCAAGGATGGTGTCTTCCAGTGGAAACGGCTCGAGAATTT
 
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rJMSF049O21+          AATAGTTCTTGCCAAGGAAAACGTGGCAAAGATGAGCAGCAACCCTGCNTTGAGAGGGAA
rJMSF034E22+          AATAGTTCTTGCCAAGGAAAACGTGGCAAAGATGAGCAGCAACCCTGCNTTGAGAGGGAA
                      ____________________________________________________________
consensus             AATAGTTCTTGCCAAGGAAAACGTGGCAAAGATGAGCAGCAACCCTGCNTTGAGAGGGAA
 
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rJMSF049O21+          TGGCAGCGTACAAAAGTACAAAGACGTTAGAGTTGAACGAAGGTTGGATNTGACNGACNC
rJMSF034E22+          TGGCAGCGTACAAAAGTACAAAGACGTTAGAGTTGAACGAAGGTTGGATTTGACNGACNC
                      ____________________________________________________________
consensus             TGGCAGCGTACAAAAGTACAAAGACGTTAGAGTTGAACGAAGGTTGGATTTGACNGACNC
 
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rJMSF049O21+          AATCAAGGATGGAGCTCGAGTGTTCCTTCTGGATGAAGGCNTTCGCNGGAAGCTTNTTCT
rJMSF034E22+          NATCAAGGATGGAGCTCGAGTGTTCCTTNTGGATGAAGGCNTTCGCNGGAAGCTTNTTNT
                      ____________________________________________________________
consensus             AATCAAGGATGGAGCTCGAGTGTTCCTTCTGGATGAAGGCNTTCGCNGGAAGCTTNTTCT
 
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rJMSF049O21+          TGCTCTCNCTGAAGACTNTAAACTTCACGTTCAAGAGCTTGTGGATGTATACCGATTGCT
rJMSF034E22+          TGCTNTCNCTGAAGACTNTAAACTTCACGTTCAAGAGCTTGTGGATGTATACCGATTGCT
                      ____________________________________________________________
consensus             TGCTCTCNCTGAAGACTNTAAACTTCACGTTCAAGAGCTTGTGGATGTATACCGATTGCT
 
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rJMSF049O21+          TGAAGACCAAATTGACATACCTTCNGTAGCAAGGGAAGTTGTTGAAGATNTTCCNTCCCT
rJMSF034E22+          TGAAGACCAAATTGACATACCTTCNGTAGCAAGGGAAGTTGTTGAAGATNTTCCNTCCCT
                      ____________________________________________________________
consensus             TGAAGACCAAATTGACATACCTTCNGTAGCAAGGGAAGTTGTTGAAGATNTTCCNTCCCT
 
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rJMSF049O21+          TGCTCGTGATGTCATGCTCTCATGGAGCAACTCCGTGTTATCGGACNGATAAGAATATAA
rJMSF034E22+          TGCTCGNGATGTCATGCTCTCATGGAGCAACTCCGTGTTATNGGACNGATAAGAATATAA
                      ____________________________________________________________
consensus             TGCTCGTGATGTCATGCTCTCATGGAGCAACTCCGTGTTATCGGACNGATAAGAATATAA
 
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rJMSF049O21+          GATGCCNTGCTGCNTTGCTTTGCTGCTGTACNGAAGTAATATTTACAAAAACCNTTTTTT
rJMSF034E22+          GATGCCNTGCTGCNTTGCTTTGCTGCTGTACNGAAGTAATATTTACAAAAACCNTTTTTT
                      ____________________________________________________________
consensus             GATGCCNTGCTGCNTTGCTTTGCTGCTGTACNGAAGTAATATTTACAAAAACCNTTTTTT
 
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rJMSF049O21+          TTTTGTCTTTCTTGTTTGGTTAATAAGCTGAC                            
rJMSF034E22+          TTTTGTCTTTCTTGTTTGGTTAATAAGCTGACTACTACAACATTACATACATCAAAAAAT
                      ____________________________________________________________
consensus             TTTTGTCTTTCTTGTTTGGTTAATAAGCTGACTACTACAACATTACATACATCAAAAAAT