Contig 002919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003K22Sequence280000850 (2)262002919 (2)
JMSF034D04Sequence689000850 (2)ref|XP_004247068.1|245PREDICTED: uncharacterized protein LOC101249852 [Solanum lycopersicum]270002919 (2)

Alignment

This contig is upended


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rJMSF003K22+                                                    CCCCCCCCCCCCCCTCTC
rJMSF034D04+                                        AGNAAAAAAANNCCCCCCCCCCCCCCTCTC
                      ____________________________________________________________
consensus                                           AGNAAAAAAANNCCCCCCCCCCCCCCTCTC
 
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rJMSF003K22+          GAGGTGGTACCCAGCAGGCCACGTCAAAATGCAGCAAATTCATCTCCCAGATGGATGTTC
rJMSF034D04+          GAGGTGGTACCCAGCAGGCCACGTCAAAATGCAGCAAATTCATCTCCCAGATGGATGTTC
                      ____________________________________________________________
consensus             GAGGTGGTACCCAGCAGGCCACGTCAAAATGCAGCAAATTCATCTCCCAGATGGATGTTC
 
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rJMSF003K22+          TTGCCCACAAAAGACGAAATTCCCTCGCCCCAGATGGTTTAAAGGCAAATTCTTTTCATT
rJMSF034D04+          TTGCCCACAAAAGACGAAATTCCCTCGCCCCAGATGGTTTAAAGGCAAATTCTTTTCATT
                      ____________________________________________________________
consensus             TTGCCCACAAAAGACGAAATTCCCTCGCCCCAGATGGTTTAAAGGCAAATTCTTTTCATT
 
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rJMSF003K22+          TGCTCTCACATTTTCTGGCCTGCACACACTTTTGGCAAGCTCTTTTTTCCCATACTGTAA
rJMSF034D04+          TGCTCTCACATTTTCTGGCCTGCACACACTTTTGGCAAGCTCTTTTTTCCCATACTGTAA
                      ____________________________________________________________
consensus             TGCTCTCACATTTTCTGGCCTGCACACACTTTTGGCAAGCTCTTTTTTCCCATACTGTAA
 
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rJMSF003K22+          CTAATTTATTGTGACTACTAGATATGTAGAGCATATAAAAGAGCTATTCCATATT     
rJMSF034D04+          CTAATTTATTGTGACTACTAGATATGTAGAGCATATAAAAGAGCTATTCCATATTAGAAC
                      ____________________________________________________________
consensus             CTAATTTATTGTGACTACTAGATATGTAGAGCATATAAAAGAGCTATTCCATATTAGAAC