Contig 002918:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011H22Sequence532016261768002918 (4)ref|XP_009796072.1|3e-65PREDICTED: intracellular protein transport protein USO1 [Nicotiana sylvestris]
JMSF010I13Sequence435009230 (3)662002918 (4)ref|XP_009796072.1|3e-46PREDICTED: intracellular protein transport protein USO1 [Nicotiana sylvestris]
JMSF032C02Sequence646009230 (3)ref|XP_004294722.1|2e-09PREDICTED: protein NETWORKED 4A isoform X1 [Fragaria vesca subsp. vesca]724002918 (4)ref|XP_009796072.1|8e-50PREDICTED: intracellular protein transport protein USO1 [Nicotiana sylvestris]
JMSF034A21Sequence646018967ref|XP_009796072.1|1e-41PREDICTED: intracellular protein transport protein USO1 [Nicotiana sylvestris]631002918 (4)ref|XP_011080649.1|2e-33PREDICTED: myosin-9-like isoform X2 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF011H22+ GCAGGATAACGTCAAAGAAATGGATGTACGCTGCCAA
                      ____________________________________________________________
consensus GCAGGATAACGTCAAAGAAATGGATGTACGCTGCCAA
 
. : . : . : . : . : . :
rJMFF011H22+ TGTTTAGAGGACGAGGCGAGACGAGTCTTAGCTGGAAAATCAGAAATGGAAGCATTGCTT
                      ____________________________________________________________
consensus TGTTTAGAGGACGAGGCGAGACGAGTCTTAGCTGGAAAATCAGAAATGGAAGCATTGCTT
 
. : . : . : . : . : . :
rJMSF010I13+ GGATCCGAGATTGAGCTGTTNAAAAATAAGCATCTCAGAGAGCAATGATCGCGNGGAAGA
rJMFF011H22+ GGATCCGAGATTGAGCTGTT-AAAAATAAGCATCTCAGAGAGCAATGATCGCGTGGAAGA
rJMSF032C02+ GGATCCGAGATTGAGCTGTT-AAAAATAAGCATCTCAGAGAGCAATGATCGCGTGGAAGA
                      ____________________________________________________________
consensus GGATCCGAGATTGAGCTGTT-AAAAATAAGCATCTCAGAGAGCAATGATCGCGTGGAAGA
 
. : . : . : . : . : . :
rJMSF010I13+ ATTGAATCGATGCATCGAAGAACTGAAATCAAAGAACGAGTTGCTGACTGCCGAAAAGGA
rJMFF011H22+ ATTGAATCGATGCATCGAAGAACTGAAATCAAAGAACGAGTTGCTGACTGCCGAAAAGGA
rJMSF032C02+ ATTGAATCGATGCATCGAAGAACTGAAATCAAAGAACGAGTTGCTGACTGCCGAAAAGGA
                      ____________________________________________________________
consensus ATTGAATCGATGCATCGAAGAACTGAAATCAAAGAACGAGTTGCTGACTGCCGAAAAGGA
 
. : . : . : . : . : . :
rJMSF010I13+ CGAGCTTAATGCGAGAGTTGTCGCACTTTCTGCCGACCTAGATTCTAGAGACGACCGCAT
rJMFF011H22+ CGAGCTTAATGCGAGAGTTGTCGCACTTTCTGCCGACCTAGATTCTAGAGACGACCGCAT
rJMSF032C02+ CGAGCTTAATGCGAGAGTTGTCGCACTTTCTGCCGACCTAGATTCTAGAGACGACCGCAT
rJMSF034A21+ CTGCCGACCTAGATTCTAGAGACGACCGCAT
                      ____________________________________________________________
consensus CGAGCTTAATGCGAGAGTTGTCGCACTTTCTGCCGACCTAGATTCTAGAGACGACCGCAT
 
. : . : . : . : . : . :
rJMSF010I13+ CCATGAAACGAACAGGCATATGCATCAACTGCATATGGAGCACGTTCAGTTGCTCGCTGA
rJMFF011H22+ CCATGAAACGAACAGGCATATGCATCAACTGCATATGGAGCACGTTCAGTTGCTCGCTGA
rJMSF032C02+ CCATGAAACGAACAGGCATATGCATCAACTGCATATGGAGCACGTTCAGTTGCTCGCTGA
rJMSF034A21+ CCATGAAACGAACAGGCATATGCATCAACTGCATATGGAGCACGTTCAGTTGCTCGCTGA
                      ____________________________________________________________
consensus CCATGAAACGAACAGGCATATGCATCAACTGCATATGGAGCACGTTCAGTTGCTCGCTGA
 
. : . : . : . : . : . :
rJMSF010I13+ AAACGACGGGGCACGCAAACTGGTGGAGGAGCTGAGATCAACGGTTAAAGATCTCGAGAC
rJMFF011H22+ AAACGACGGGGCACGCAAACTGGTGGAGGAGCTGAGATCAACGGTTAAAGATCTCGAGAC
rJMSF032C02+ AAACGACGGGGCACGCAAACTGGTGGAGGAGCTGAGATCAACGGTTAAAGATCTCGAGAC
rJMSF034A21+ AAACGACGGGGCACGCAAACTGGTGGAGGAGCTGAGATCAACGGTTAAAGATCTCGAGAC
                      ____________________________________________________________
consensus AAACGACGGGGCACGCAAACTGGTGGAGGAGCTGAGATCAACGGTTAAAGATCTCGAGAC
 
. : . : . : . : . : . :
rJMSF010I13+ CGACATAAGGAGACAACATGAACTGATCGAGGAAGGCGCAGAGGAGAAACGGGAGGCCAT
rJMFF011H22+ CGACATAAGGAGACAACATGAACTGATCGAGGAAGGCGCAGAGGAGAAACGGGAGGCCAT
rJMSF032C02+ CGACATAAGGAGACAACATGAACTGATCGAGGAAGGCGCAGAGGAGAAACGGGAGGCCAT
rJMSF034A21+ CGACATAAGGAGACAACATGAACTGATCGAGGAAGGCGCAGAGGAGAAACGGGAGGCCAT
                      ____________________________________________________________
consensus CGACATAAGGAGACAACATGAACTGATCGAGGAAGGCGCAGAGGAGAAACGGGAGGCCAT
 
. : . : . : . : . : . :
rJMSF010I13+ CCGGCAGCTGTGTTTCTCGCTGGAGCACTACAGGAACGGCTACCATCGCCTTCGAGAAGT
rJMFF011H22+ CCGGCAGCTGTGTTTCTCGCTGGAGCACTACAGGAACGGCTACCATCGCCTTCGAGAAGT
rJMSF032C02+ CCGGCAGCTGTGTTTCTCGCTGGAGCACTACAGGAACGGCTACCATCGCCTTCGAGAAGT
rJMSF034A21+ CCGGCAGCTGTGTTTCTCGCTGGAGCACTACAGGAACGGCTACCATCGCCTTCGAGAAGT
                      ____________________________________________________________
consensus CCGGCAGCTGTGTTTCTCGCTGGAGCACTACAGGAACGGCTACCATCGCCTTCGAGAAGT
 
. : . : . : . : . : . :
rJMSF010I13+ TGTCATGGGCAACAAGAGGGTACCTGTAATGGCATCCTGAATCATTGGCAAAAAAGCACA
rJMFF011H22+ TGTCATGGGCAACAAGAGGGTACCTGTAATGGCATCCTGAATCATTGGCAAAAAAGCACA
rJMSF032C02+ TGTCATGGGCAACAAGAGGGTACCTGTAATGGCATCCTGAATCATTGGCAAAAAAGCACA
rJMSF034A21+ TGTCATGGGCAACAAGAGGGTACCTGTAANGGCATCCTGAATCATTGGCAAAAAAGCACA
                      ____________________________________________________________
consensus TGTCATGGGCAACAAGAGGGTACCTGTAATGGCATCCTGAATCATTGGCAAAAAAGCACA
 
. : . : . : . : . : . :
rJMSF010I13+ TCCCAGTCACCTCTTCCATCTTTCCTTCTCTCTCTTTCCCTTTCCAAATTTTTTGTATTT
rJMFF011H22+ TCCCAGTCACCTCTTCCATCTTTCCTTCTCTCTCTTTCCCTTTCCAAATTTTTTGTATTT
rJMSF032C02+ TCCCAGTCACCTCTTCCATCTTTCCTTCTCTCTCTTTCCCTTTCCAAATTTTTTGTATTT
rJMSF034A21+ TCCCAGTCACCTCTTCCATCTTTCCTTCTCTCTCTTTCCCTTTCCAAATTTTTTGTATTT
                      ____________________________________________________________
consensus TCCCAGTCACCTCTTCCATCTTTCCTTCTCTCTCTTTCCCTTTCCAAATTTTTTGTATTT
 
. : . : . : . : . : . :
rJMSF010I13+ TGACTGTTTTCAGTCCCATGTATTTTGTCAAGACTGTCATGTTTTCTTCTATTTTTTTGG
rJMFF011H22+ TGACTGTTTTCAGTCCCATGTATTTTGTCAAGACTGTCATGTTTTCTTCTATTTTTTTGG
rJMSF032C02+ TGACTGTTTTCAGTCCCATGTATTTTGTCAAGACTGTCATGTTTTCTTCTATTTTTTTGG
rJMSF034A21+ TGACTGTTTTCAGTCCCATGTATTTTGTCAAGACNGTCATGTTTTCTTNTATTTTTTTGG
                      ____________________________________________________________
consensus TGACTGTTTTCAGTCCCATGTATTTTGTCAAGACTGTCATGTTTTCTTCTATTTTTTTGG
 
. : . : . : . : . : . :
rJMSF010I13+ GACTTCCATACTATAAGTATACGTTCTGGTGCAACTTCAAGTT
rJMFF011H22+ GACTTCCATACTATAAGTATACGTTCTGGTGCAACTTCAAGTTTGGATTTGAAGTTGGTC
rJMSF032C02+ GACTTCCATACTATAAGTATACGTTCTGGTGCAACTTCAAGTTTGGATTTGAAGTTGGTC
rJMSF034A21+ GACTTCCATACTATAAGTATACGTTCTGGTGCAACTTCAAGTTTGGATTTGAAGNTGGTC
                      ____________________________________________________________
consensus GACTTCCATACTATAAGTATACGTTCTGGTGCAACTTCAAGTTTGGATTTGAAGTTGGTC
 
. : . : . : . : . : . :
rJMFF011H22+ GAGTATAAGTGC
rJMSF032C02+ GAGTATAAGTGCTTTATAAACTTGTATTCTTCGATTGAGCCTTGTTACTATT
rJMSF034A21+ GAGTATAAGTGCTTTATAAACTTGTATTCTTCGATTGAGCCTTGTTACTATTTGGGTTTA
                      ____________________________________________________________
consensus GAGTATAAGTGCTTTATAAACTTGTATTCTTCGATTGAGCCTTGTTACTATTTGGGTTTA
 
. : . : . : . : . : . :
rJMSF034A21+ TCCTTTTCCCCCTTTTTGGTAGGAAGTACTTTTCCCTTTTAAGGNGCAGTTTCAGCATAT
                      ____________________________________________________________
consensus TCCTTTTCCCCCTTTTTGGTAGGAAGTACTTTTCCCTTTTAAGGNGCAGTTTCAGCATAT