Contig 002912:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020G16Sequence679021043ref|XP_009619332.1|2e-22PREDICTED: uncharacterized protein LOC104111357 isoform X2 [Nicotiana tomentosi808002912 (3)ref|XP_006339220.1|4e-72PREDICTED: uncharacterized protein LOC102603320 isoform X1 [Solanum tuberosum]
JMSF032K24Sequence684002912 (3)ref|XP_009619331.1|9e-80PREDICTED: uncharacterized protein LOC104111357 isoform X1 [Nicotiana tomentosi708002912 (3)ref|XP_006339220.1|7e-34PREDICTED: uncharacterized protein LOC102603320 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF032K24-                                                                  GGGAA
                      ____________________________________________________________
consensus                                                                    GGGAA
 
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JMSF032K24-           AAGTTAACAATGGCAGTTGGGAGCTGTAGTCTACCGCTTCCTCTTTCTCAAATGACTCGG
                      ____________________________________________________________
consensus             AAGTTAACAATGGCAGTTGGGAGCTGTAGTCTACCGCTTCCTCTTTCTCAAATGACTCGG
 
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JMSF032K24-           ATTTTCTCTTCATCAGCATCAACAAGAGAAAGGAAGATTACGTCTAAGTGTAAATTGAAC
                      ____________________________________________________________
consensus             ATTTTCTCTTCATCAGCATCAACAAGAGAAAGGAAGATTACGTCTAAGTGTAAATTGAAC
 
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JMSF032K24-           TCTGTCTCCCTTAACACTCTTAGTAACAGTGTCTCCGATAAAGCGTTGCTAGATATCCAA
                      ____________________________________________________________
consensus             TCTGTCTCCCTTAACACTCTTAGTAACAGTGTCTCCGATAAAGCGTTGCTAGATATCCAA
 
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JMSF032K24-           AATTCTGGAGTCATTGCGTGTCTCCGTGCTCCAAGTGCAGAAGTGGCCATGGAAGCTGCG
                      ____________________________________________________________
consensus             AATTCTGGAGTCATTGCGTGTCTCCGTGCTCCAAGTGCAGAAGTGGCCATGGAAGCTGCG
 
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JMSF032K24-           CTTGCTGCACTTGATGCTGGAATCTCCGTGCTGGAAATTGTAGTGTCAACTCCAGGTGTG
                      ____________________________________________________________
consensus             CTTGCTGCACTTGATGCTGGAATCTCCGTGCTGGAAATTGTAGTGTCAACTCCAGGTGTG
 
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JMSF032K24-           TTTGAGGTATTAAGAAAATTAGTCCATTGTTATCCCACAAAAACTATAGGAATTGGAACT
rJMSF020G16+                                                                GGAACT
                      ____________________________________________________________
consensus             TTTGAGGTATTAAGAAAATTAGTCCATTGTTATCCCACAAAAACTATAGGAATTGGAACT
 
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JMSF032K24-           GTATTGTGTGCAAAAGATGCCAAAGATGCGAGTGAGTTTGGAGCCAAGTTTCTTATGAGT
rJMSF020G16+          GTATTGTGTGCAAAAGATGCCAAAGATGCGAGTGAGTTNGGAGCCAAGTTTCTTATGAGT
                      ____________________________________________________________
consensus             GTATTGTGTGCAAAAGATGCCAAAGATGCGAGTGAGTTTGGAGCCAAGTTTCTTATGAGT
 
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JMSF032K24-           CCTGTATTAGTGAAGGACATTCTAGTTGGTCTTTCAGGAGATGAGGCTCTGTATATACCT
rJMSF020G16+          CCTGTATTAGTGAAGGACATTCTAGTTGGTCTTTCAGGAGATGAGGCTCTGTATATACCT
                      ____________________________________________________________
consensus             CCTGTATTAGTGAAGGACATTCTAGTTGGTCTTTCAGGAGATGAGGCTCTGTATATACCT
 
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JMSF032K24-           GGAGCAATGACCCCAACAGAGATATTATCTGCCTTCAGTATGGGTGCCAAGATTGTCAAG
rJMSF020G16+          GGAGCAATGACCCCAACAGAGATATTATCTGCCTTCAGTATGGGTGCCAAGATTGTCAAG
                      ____________________________________________________________
consensus             GGAGCAATGACCCCAACAGAGATATTATCTGCCTTCAGTATGGGTGCCAAGATTGTCAAG
 
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JMSF032K24-           GTATATCCTGTCTCAGCATTGGGAGGAACTAAGTATATTTCGGCATTGAAAAGGCCATTC
rJMSF020G16+          GTATATCCTGTCTCAGCATTGGGAGGAACTAAGTATATTTCGGCATTGAAAAGGCCATTC
rJMSF032K24+                             TGGGAGGAACTAAGTATATTTCGGCATTGAAAAGGCCATTC
                      ____________________________________________________________
consensus             GTATATCCTGTCTCAGCATTGGGAGGAACTAAGTATATTTCGGCATTGAAAAGGCCATTC
 
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JMSF032K24-           TCTCATATTCCAATGGTAGCATCTCAGGGGATAACGATAGATTTAGTCGGGGAATATATT
rJMSF020G16+          TCTCATATTCCAATGGTAGCATCTCAGGGGATAACGATAGATTTAGTCGGGGAATATATT
rJMSF032K24+          TCTCATATTCCAATGGTAGCATCTCAGGGGATAACGATAGATTTAGTCGGGGAATATATT
                      ____________________________________________________________
consensus             TCTCATATTCCAATGGTAGCATCTCAGGGGATAACGATAGATTTAGTCGGGGAATATATT
 
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JMSF032K24-           GCTCAGGGAGCATCGGCAG                                         
rJMSF020G16+          GCTCAGGGAGCATCGGCAGTTGTTTTGTCAGATGCTATATTCGATAAGAAGGCAATGAGC
rJMSF032K24+          GCTCAGGGAGCATCGGCAGTTGTTTTGTCAGATGCTATATTCGATAAGAAGGCAATGAGC
                      ____________________________________________________________
consensus             GCTCAGGGAGCATCGGCAGTTGTTTTGTCAGATGCTATATTCGATAAGAAGGCAATGAGC
 
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rJMSF020G16+          CTACGTAATTTCGATGTAGTACATCAACTAGCCTCCCGTGCAGCTCTGCAGGGAAAAGAA
rJMSF032K24+          CTACGTAATTTCGATGTAGTACATCAACTAGCCTCCCGTGCAGCTCTGCAGGGAAAAGAA
                      ____________________________________________________________
consensus             CTACGTAATTTCGATGTAGTACATCAACTAGCCTCCCGTGCAGCTCTGCAGGGAAAAGAA
 
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rJMSF020G16+          GCTGTAAAAAGGAGAAGCGGTCACTAGAACCATTTTGAGTTCTTATAGTGAGCCCTGATG
rJMSF032K24+          GCTGTAAAAAGGAGAAGCGGTCACTAGAACCATTTTGAGTTCTTATAGTGAGCCCTGATG
                      ____________________________________________________________
consensus             GCTGTAAAAAGGAGAAGCGGTCACTAGAACCATTTTGAGTTCTTATAGTGAGCCCTGATG
 
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rJMSF020G16+          ACAGAATTGTGAAAGCAAAATGGTTCAGTCCTGAAGAGTAGACTGTAATGGCTAATCACC
rJMSF032K24+          ACAGAATTGTGAAAGCAAAATGGTTCAGTCCTGAAGAGTAGACTGTAATGGCTAATCACC
                      ____________________________________________________________
consensus             ACAGAATTGTGAAAGCAAAATGGTTCAGTCCTGAAGAGTAGACTGTAATGGCTAATCACC
 
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rJMSF020G16+          AAATAGCATTTTTGCTTTGCAGCTGTTCTCCTGGGGTTCTTTAGCTGTTCTCTTCTCCAG
rJMSF032K24+          AAATAGCATTTTTGCTTTGCAGCTGTTCTCCTGGGGTTCTTTAGCTGTTCTCTTCTCCAG
                      ____________________________________________________________
consensus             AAATAGCATTTTTGCTTTGCAGCTGTTCTCCTGGGGTTCTTTAGCTGTTCTCTTCTCCAG
 
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rJMSF020G16+          ATGATAAAGTCCGTTCCTATGTAACAGCTCGCAAACTACATACCAGAGATAAATTGCACT
rJMSF032K24+          ATGATAAAGTCCGTTCCTATGTAACAGCTCGCAAACTACATACCAGAGATAAATTGCACT
                      ____________________________________________________________
consensus             ATGATAAAGTCCGTTCCTATGTAACAGCTCGCAAACTACATACCAGAGATAAATTGCACT
 
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rJMSF020G16+          AGGTAAATTTTATTTGACGAGCTTAACCAAGAAGTAATTGACAAGAATCAAACTCGTGAA
rJMSF032K24+          AGGTAAATTTTATTTGACGAGCTTAACCAAGAAGTAATTGACAAGAATCAAACTCGTGAA
                      ____________________________________________________________
consensus             AGGTAAATTTTATTTGACGAGCTTAACCAAGAAGTAATTGACAAGAATCAAACTCGTGAA
 
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rJMSF020G16+          TTTTTAAATACGAACATTATGCTCATCTACTTGGCCACCTCTTTTATACGTACATGCTTT
rJMSF032K24+          TTTTTAAATACGAACATTATGCTCATCTACTTGGCCACCTCTTTTATACGTACATGCTTT
                      ____________________________________________________________
consensus             TTTTTAAATACGAACATTATGCTCATCTACTTGGCCACCTCTTTTATACGTACATGCTTT
 
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rJMSF020G16+          TTAGCTCAGCAT                                                
rJMSF032K24+          TTAGCTCAGCATATTTCGGGGTATGCCTTTGGAATGTTGCACATATTTTTTCTTAGTAAC
                      ____________________________________________________________
consensus             TTAGCTCAGCATATTTCGGGGTATGCCTTTGGAATGTTGCACATATTTTTTCTTAGTAAC
 
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rJMSF032K24+          ATATTTATCGTCACTTTATATGAGATTGTGATTGTATGTACTTTCAAGTATTTAAAATTA
                      ____________________________________________________________
consensus             ATATTTATCGTCACTTTATATGAGATTGTGATTGTATGTACTTTCAAGTATTTAAAATTA