clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002F24 | Sequence | 506 | 002911 (11) | gb|AFK40653.1| | 7e-89 | unknown [Medicago truncatula] | 740 | 002911 (11) | emb|CDP06107.1| | 5e-113 | unnamed protein product [Coffea canephora] |
JMSF032F11 | Sequence | 703 | 002911 (11) | gb|ACJ85002.1| | 9e-138 | unknown [Medicago truncatula] | 723 | 002911 (11) | emb|CDP06107.1| | 8e-113 | unnamed protein product [Coffea canephora] |
JMSF039N02 | Sequence | 672 | 002911 (11) | gb|KDO50499.1| | 1e-114 | hypothetical protein CISIN_1g017492mg [Citrus sinensis] | 793 | 002911 (11) | emb|CDP06107.1| | 6e-152 | unnamed protein product [Coffea canephora] |
JMSF046C15 | Sequence | 759 | 000927 (2) | ref|XP_009793835.1| | 2e-21 | PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Nicotiana sylvestris] | 717 | 002911 (11) | emb|CDP06107.1| | 2e-112 | unnamed protein product [Coffea canephora] |
JMSF049C20 | Sequence | 706 | 002911 (11) | gb|ACJ85002.1| | 3e-139 | unknown [Medicago truncatula] | 755 | 002911 (11) | emb|CDP06107.1| | 2e-127 | unnamed protein product [Coffea canephora] |
JMSF050N09 | Sequence | 712 | 002911 (11) | gb|ACJ85002.1| | 3e-141 | unknown [Medicago truncatula] | 722 | 002911 (11) | emb|CDP06107.1| | 6e-116 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF002F24- A
JMSF032F11- GCA
JMSF049C20- A
____________________________________________________________
consensus GCA
. : . : . : . : . : . :
JMFF002F24- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF032F11- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF049C20- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF050N09- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
____________________________________________________________
consensus TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
. : . : . : . : . : . :
JMFF002F24- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF032F11- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF049C20- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF039N02- AGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF050N09- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
____________________________________________________________
consensus AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
. : . : . : . : . : . :
JMFF002F24- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF032F11- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF049C20- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF039N02- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF050N09- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
____________________________________________________________
consensus AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
. : . : . : . : . : . :
JMFF002F24- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF032F11- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF049C20- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF039N02- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF050N09- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
____________________________________________________________
consensus AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
. : . : . : . : . : . :
JMFF002F24- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF032F11- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF049C20- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF039N02- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF050N09- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
____________________________________________________________
consensus GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
. : . : . : . : . : . :
JMFF002F24- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF032F11- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF049C20- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF039N02- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF050N09- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
____________________________________________________________
consensus GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
. : . : . : . : . : . :
JMFF002F24- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF032F11- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF049C20- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF039N02- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF050N09- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
____________________________________________________________
consensus GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
. : . : . : . : . : . :
JMFF002F24- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF032F11- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF049C20- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF039N02- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF050N09- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
rJMSF039N02+ GACAGGAATGTTGTTGCT
____________________________________________________________
consensus ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
. : . : . : . : . : . :
JMFF002F24- CAACTTGTTAGAAGAGCTGAAAA
JMSF032F11- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF049C20- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF039N02- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF050N09- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
rJMSF039N02+ CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
____________________________________________________________
consensus CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
. : . : . : . : . : . :
JMSF032F11- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF049C20- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF039N02- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF050N09- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
rJMSF039N02+ CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
rJMSF050N09+ G
rJMSF049C20+ GCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
____________________________________________________________
consensus CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
. : . : . : . : . : . :
JMSF032F11- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
JMSF049C20- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
JMSF039N02- ACTTT
JMSF050N09- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF039N02+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF050N09+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMFF002F24+ CTTTGAAAANCTTNGAAGGATTGANCCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF049C20+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF046C15+ GGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF032F11+ TTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
____________________________________________________________
consensus ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
. : . : . : . : . : . :
JMSF032F11- TTAGCCTCCTATGTCGCTGGTCAATTTGATCGTACTTTGA
JMSF049C20- TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTG
JMSF050N09- TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGG
rJMSF039N02+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF050N09+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMFF002F24+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF049C20+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF046C15+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF032F11+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
____________________________________________________________
consensus TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
. : . : . : . : . : . :
rJMSF039N02+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF050N09+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMFF002F24+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF049C20+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF046C15+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF032F11+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
____________________________________________________________
consensus CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
. : . : . : . : . : . :
rJMSF039N02+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF050N09+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMFF002F24+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF049C20+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF046C15+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF032F11+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
____________________________________________________________
consensus AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
. : . : . : . : . : . :
rJMSF039N02+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF050N09+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMFF002F24+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF049C20+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF046C15+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF032F11+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
____________________________________________________________
consensus CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
. : . : . : . : . : . :
rJMSF039N02+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF050N09+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTNTG
rJMFF002F24+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF049C20+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF046C15+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF032F11+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
____________________________________________________________
consensus CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
. : . : . : . : . : . :
rJMSF039N02+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF050N09+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMFF002F24+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF049C20+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF046C15+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF032F11+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
____________________________________________________________
consensus GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
. : . : . : . : . : . :
rJMSF039N02+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF050N09+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMFF002F24+ GGAGAAGCAGGAGTGAGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF049C20+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF046C15+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF032F11+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
____________________________________________________________
consensus GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
. : . : . : . : . : . :
rJMSF039N02+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF050N09+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMFF002F24+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF049C20+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF046C15+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF032F11+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
____________________________________________________________
consensus GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
. : . : . : . : . : . :
rJMSF039N02+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF050N09+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMFF002F24+ GATGCTCC
rJMSF049C20+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF046C15+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF032F11+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
____________________________________________________________
consensus GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
. : . : . : . : . : . :
rJMSF039N02+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTC
rJMSF050N09+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF049C20+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF046C15+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF032F11+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
____________________________________________________________
consensus AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
. : . : . : . : . : . :
rJMSF050N09+ AAA
rJMSF049C20+ AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATAC
rJMSF046C15+ AAACTAAGTTTACTGAAACATGTGTTTTTTTTTGCTTCTGTAATGATATAC
rJMSF032F11+ AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATACCTGATGATA
____________________________________________________________
consensus AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATACCTGATGATA