Contig 002911:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F24Sequence506002911 (11)gb|AFK40653.1|7e-89unknown [Medicago truncatula]740002911 (11)emb|CDP06107.1|5e-113unnamed protein product [Coffea canephora]
JMSF032F11Sequence703002911 (11)gb|ACJ85002.1|9e-138unknown [Medicago truncatula]723002911 (11)emb|CDP06107.1|8e-113unnamed protein product [Coffea canephora]
JMSF039N02Sequence672002911 (11)gb|KDO50499.1|1e-114hypothetical protein CISIN_1g017492mg [Citrus sinensis]793002911 (11)emb|CDP06107.1|6e-152unnamed protein product [Coffea canephora]
JMSF046C15Sequence759000927 (2)ref|XP_009793835.1|2e-21PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Nicotiana sylvestris]717002911 (11)emb|CDP06107.1|2e-112unnamed protein product [Coffea canephora]
JMSF049C20Sequence706002911 (11)gb|ACJ85002.1|3e-139unknown [Medicago truncatula]755002911 (11)emb|CDP06107.1|2e-127unnamed protein product [Coffea canephora]
JMSF050N09Sequence712002911 (11)gb|ACJ85002.1|3e-141unknown [Medicago truncatula]722002911 (11)emb|CDP06107.1|6e-116unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF002F24- A
JMSF032F11- GCA
JMSF049C20- A
                      ____________________________________________________________
consensus GCA
 
. : . : . : . : . : . :
JMFF002F24- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF032F11- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF049C20- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
JMSF050N09- TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
                      ____________________________________________________________
consensus TGCACTCTTTTCTCTAGCTTTGGAGCTCAAGATTTTTAGAGGGGAAGCATAAAAGGAGCA
 
. : . : . : . : . : . :
JMFF002F24- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF032F11- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF049C20- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF039N02- AGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
JMSF050N09- AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
                      ____________________________________________________________
consensus AAGATGGGGGAGATTACCAATGTGATGGAGTATGAAGCTATTGCTAAGAAGAAGTTGCCT
 
. : . : . : . : . : . :
JMFF002F24- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF032F11- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF049C20- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF039N02- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
JMSF050N09- AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
                      ____________________________________________________________
consensus AAGATGGCGTTTGATTACTATGCATCAGGTGCGGAGGACCAGTGGACTCTGGCTGAAAAT
 
. : . : . : . : . : . :
JMFF002F24- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF032F11- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF049C20- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF039N02- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
JMSF050N09- AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
                      ____________________________________________________________
consensus AGGAATGCCTTCTCAAGAATTCTGTTTAGGCCCCGTATTCTTATTGATGTGAGCAAAATT
 
. : . : . : . : . : . :
JMFF002F24- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF032F11- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF049C20- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF039N02- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
JMSF050N09- GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
                      ____________________________________________________________
consensus GACATGAGCACCACAGTGCTAGGCTTCAAGATTTCCATGCCTATCATGATTGCACCAACA
 
. : . : . : . : . : . :
JMFF002F24- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF032F11- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF049C20- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF039N02- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
JMSF050N09- GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
                      ____________________________________________________________
consensus GCCTTCCAGAAAATGGCTCATCCTGAAGGAGAATATGCTACTGCACGAGCTGCATCAGCA
 
. : . : . : . : . : . :
JMFF002F24- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF032F11- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF049C20- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF039N02- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
JMSF050N09- GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
                      ____________________________________________________________
consensus GCTGGAACAATTATGACATTGTCATCTTGGGCTACGTCCAGTGTTGAGGAGGTGGCTTCA
 
. : . : . : . : . : . :
JMFF002F24- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF032F11- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF049C20- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF039N02- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
JMSF050N09- ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
rJMSF039N02+ GACAGGAATGTTGTTGCT
                      ____________________________________________________________
consensus ACTGGACCAGGCATCCGCTTTTTCCAGCTTTATGTTTACAAGGACAGGAATGTTGTTGCT
 
. : . : . : . : . : . :
JMFF002F24- CAACTTGTTAGAAGAGCTGAAAA
JMSF032F11- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF049C20- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF039N02- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
JMSF050N09- CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
rJMSF039N02+ CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
                      ____________________________________________________________
consensus CAACTTGTTAGAAGAGCTGAAAAGGCAGGATTCAAGGCTATAGCTCTTACCGTTGACACC
 
. : . : . : . : . : . :
JMSF032F11- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF049C20- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF039N02- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
JMSF050N09- CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
rJMSF039N02+ CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
rJMSF050N09+ G
rJMSF049C20+ GCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
                      ____________________________________________________________
consensus CCAAGGTTGGGGCGTAGGGAAGCTGATATTAAGAACAGGTTTACTCTGCCACCATTTCTG
 
. : . : . : . : . : . :
JMSF032F11- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
JMSF049C20- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
JMSF039N02- ACTTT
JMSF050N09- ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF039N02+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF050N09+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMFF002F24+ CTTTGAAAANCTTNGAAGGATTGANCCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF049C20+ ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF046C15+ GGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
rJMSF032F11+ TTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
                      ____________________________________________________________
consensus ACTTTGAAAAACTTTGAAGGATTGAACCTGGGCAAGATGGATGAAGCTGATGATTCTGGA
 
. : . : . : . : . : . :
JMSF032F11- TTAGCCTCCTATGTCGCTGGTCAATTTGATCGTACTTTGA
JMSF049C20- TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTG
JMSF050N09- TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGG
rJMSF039N02+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF050N09+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMFF002F24+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF049C20+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF046C15+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
rJMSF032F11+ TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
                      ____________________________________________________________
consensus TTAGCCTCCTATGTCGCTGGTCAAATTGATCGTACTTTGAGTTGGAAGGATGTTCAGTGG
 
. : . : . : . : . : . :
rJMSF039N02+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF050N09+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMFF002F24+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF049C20+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF046C15+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
rJMSF032F11+ CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
                      ____________________________________________________________
consensus CTCCAGACAATCACTTCAATGCCAATCTTGGTGAAGGGTGTGCTTACTGCTGAGGATGCA
 
. : . : . : . : . : . :
rJMSF039N02+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF050N09+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMFF002F24+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF049C20+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF046C15+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
rJMSF032F11+ AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
                      ____________________________________________________________
consensus AGAATAGCAGTTCAGGTTGGAGCAGCTGGTATAATTGTATCAAATCATGGAGCTCGCCAA
 
. : . : . : . : . : . :
rJMSF039N02+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF050N09+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMFF002F24+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF049C20+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF046C15+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
rJMSF032F11+ CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
                      ____________________________________________________________
consensus CTTGACTATGTCCCTTCTACTATCATGGCTCTTGAAGAGGTGGTGAAAGCTGCACAAGGC
 
. : . : . : . : . : . :
rJMSF039N02+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF050N09+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTNTG
rJMFF002F24+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF049C20+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF046C15+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
rJMSF032F11+ CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
                      ____________________________________________________________
consensus CGCATTCCTGTGTTCTTGGATGGAGGCGTTCGTCGTGGAACTGACGTCTTCAAAGCTCTG
 
. : . : . : . : . : . :
rJMSF039N02+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF050N09+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMFF002F24+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF049C20+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF046C15+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
rJMSF032F11+ GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
                      ____________________________________________________________
consensus GCGCTTGGAGCCTCGGGCATATTTATTGGGCGACCGGTGGTGTACTCGCTGGCTTCAGAA
 
. : . : . : . : . : . :
rJMSF039N02+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF050N09+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMFF002F24+ GGAGAAGCAGGAGTGAGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF049C20+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF046C15+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
rJMSF032F11+ GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
                      ____________________________________________________________
consensus GGAGAAGCAGGAGTGCGGAAAGTTCTGCAGATGCTGCACGATGAATTCGAACTGACTATG
 
. : . : . : . : . : . :
rJMSF039N02+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF050N09+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMFF002F24+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF049C20+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF046C15+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
rJMSF032F11+ GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
                      ____________________________________________________________
consensus GCGTTGAGTGGCTGCCGTTCACTGAGAGAGATCACTCGTAACCACATTGTGACTGATTGG
 
. : . : . : . : . : . :
rJMSF039N02+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF050N09+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMFF002F24+ GATGCTCC
rJMSF049C20+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF046C15+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
rJMSF032F11+ GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
                      ____________________________________________________________
consensus GATGCTCCCCACGCCCTTCCTGCCCCGAGGTTATAAGCGCATTCACAGTGGCTTCATTGG
 
. : . : . : . : . : . :
rJMSF039N02+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTC
rJMSF050N09+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF049C20+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF046C15+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
rJMSF032F11+ AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
                      ____________________________________________________________
consensus AACAGACTGATCTTCAAGTATTATGTTCATCTTTCATGAGCCTGGAACTCATTTCTGTTT
 
. : . : . : . : . : . :
rJMSF050N09+ AAA
rJMSF049C20+ AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATAC
rJMSF046C15+ AAACTAAGTTTACTGAAACATGTGTTTTTTTTTGCTTCTGTAATGATATAC
rJMSF032F11+ AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATACCTGATGATA
                      ____________________________________________________________
consensus AAACTAAGTTTACTG-AACATGTGTTTTTTTTTGCTTCTGTAATGATATACCTGATGATA