Contig 002910:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007F17Sequence466024096gb|KHG14870.1|7e-73Lipoxygenase 6, choloroplastic -like protein [Gossypium arboreum] gb|KHG18786.1|777002910 (2)emb|CDP13317.1|1e-119unnamed protein product [Coffea canephora]
JMSF032E01Sequence562012070 (2)ref|XP_009771025.1|3e-29PREDICTED: lipoxygenase 6, chloroplastic isoform X2 [Nicotiana sylvestris]712002910 (2)gb|KDP26771.1|7e-87hypothetical protein JCGZ_17929 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007F17+ TATGCAGCAGATGGGCTTNTGATATGGGCAGCCATAAAAGAGCTGGTGGA
                      ____________________________________________________________
consensus TATGCAGCAGATGGGCTTNTGATATGGGCAGCCATAAAAGAGCTGGTGGA
 
. : . : . : . : . : . :
rJMSF007F17+ ATCTTACGTTGACCACTATTATTCTTCTGATCATCCGGGCTGTGTTACATCCGACACTGA
                      ____________________________________________________________
consensus ATCTTACGTTGACCACTATTATTCTTCTGATCATCCGGGCTGTGTTACATCCGACACTGA
 
. : . : . : . : . : . :
rJMSF007F17+ ACTCCAAGATTGGTGGAGTGAGATCAAGAACAAAGGCCACGCTGACAAAAAACATGAGCC
                      ____________________________________________________________
consensus ACTCCAAGATTGGTGGAGTGAGATCAAGAACAAAGGCCACGCTGACAAAAAACATGAGCC
 
. : . : . : . : . : . :
rJMSF007F17+ ATGGTGGCCTAGCCTCAACACCAAACATGACTTATCTGCCATTCTAACCACAATCATATG
rJMSF032E01+ CTAGCCTCAACACCAAACATGACTTATCTGCCATTCTAACCACAATCATATG
                      ____________________________________________________________
consensus ATGGTGGCCTAGCCTCAACACCAAACATGACTTATCTGCCATTCTAACCACAATCATATG
 
. : . : . : . : . : . :
rJMSF007F17+ GGTTGCCTCAGGCCAACATGCTGCCATCAACTTTGGGCAGTACCCTTTTGGGGGTTATGT
rJMSF032E01+ GGTTGCCTCAGGCCAACATGCTGCCATCAACTTTGGGCAGTACCCTTTTGGGGGTTATGT
                      ____________________________________________________________
consensus GGTTGCCTCAGGCCAACATGCTGCCATCAACTTTGGGCAGTACCCTTTTGGGGGTTATGT
 
. : . : . : . : . : . :
rJMSF007F17+ GCCAAATCGTCCAACCTTAATGCGCAGACTGATCCCCCAAGAACAAGATGATGATTACCA
rJMSF032E01+ GCCAAATCGTCCAACCTTAATGCGCAGACTGATCCCCCAAGAACAAGATGATGATTACCA
                      ____________________________________________________________
consensus GCCAAATCGTCCAACCTTAATGCGCAGACTGATCCCCCAAGAACAAGATGATGATTACCA
 
. : . : . : . : . : . :
rJMSF007F17+ GAACTTTCTCCTTAACCCTCAACAAACATTTTTGTCATCTTTGCCAACTCAACTCCAAGC
rJMSF032E01+ GAACTTTCTCCTTAACCCTCAACAAACATTTTTGTCATCTTTGCCAACTCAACTCCAAGC
                      ____________________________________________________________
consensus GAACTTTCTCCTTAACCCTCAACAAACATTTTTGTCATCTTTGCCAACTCAACTCCAAGC
 
. : . : . : . : . : . :
rJMSF007F17+ TACAAAAGTGATGGCGGTCCAAGATACACTGTCCACACATTCTCCTGATGAGGAGTACTT
rJMSF032E01+ TACAAAAGTGATGGCGGTCCAAGATACACTGTCCACACATTCTCCTGATGAGGAGTACTT
                      ____________________________________________________________
consensus TACAAAAGTGATGGCGGTCCAAGATACACTGTCCACACATTCTCCTGATGAGGAGTACTT
 
. : . : . : . : . : . :
rJMSF007F17+ GCATCAACTCCACCAACTCCATAGCTCCTCCATCACGGATCCCCATGTTCTAAACCTGTT
rJMSF032E01+ GCATCAACTCCACCAACTCCATAGCTCCTCCATCACGGATCCCCATGTTCTAAACCTGTT
                      ____________________________________________________________
consensus GCATCAACTCCACCAACTCCATAGCTCCTCCATCACGGATCCCCATGTTCTAAACCTGTT
 
. : . : . : . : . : . :
rJMSF007F17+ TGCAACATTTTCTGCAAAACTAGAGGAGATAGAAGACACCATAAACCGAAGAAACAAGGA
rJMSF032E01+ TGCAACATTTTCTGCAAAACTAGAGGAGATAGAAGACACCATAAACCGAAGAAACAAGGA
                      ____________________________________________________________
consensus TGCAACATTTTCTGCAAAACTAGAGGAGATAGAAGACACCATAAACCGAAGAAACAAGGA
 
. : . : . : . : . : . :
rJMSF007F17+ TGAGAATCTGAAAAACCGAAACGGTGCTGGGATCCCTCCATATCAACTACTTATGCCCTC
rJMSF032E01+ TGAGAATCTGAAAAACCGAAACGGTGCTGGGATCCCTCCATATCAACTACTTATGCCCTC
                      ____________________________________________________________
consensus TGAGAATCTGAAAAACCGAAACGGTGCTGGGATCCCTCCATATCAACTACTTATGCCCTC
 
. : . : . : . : . : . :
rJMSF007F17+ TTCACCTCCAGGCGTGACTGGTCGTGGTGTTCCCAACAGCATCTCAATCTGATATACTGA
rJMSF032E01+ TTCACCTCCAGGCGTGACTGGTCGTGGTGTTCCCAACAGCATCTCAATCTGATATACTGA
                      ____________________________________________________________
consensus TTCACCTCCAGGCGTGACTGGTCGTGGTGTTCCCAACAGCATCTCAATCTGATATACTGA
 
. : . : . : . : . : . :
rJMSF007F17+ TGATCAGATGCACTTCAAGAAAATTATATATGGATTACTAGTTCAATAAATAAGTAGTCT
rJMSF032E01+ TGATCAGATGCACTTCAAGAAAATTATATATGGATTACTAGTTCAATAAATAAGTAGTCT
                      ____________________________________________________________
consensus TGATCAGATGCACTTCAAGAAAATTATATATGGATTACTAGTTCAATAAATAAGTAGTCT
 
. : . : . : . : . : . :
rJMSF007F17+ TAATGAT
rJMSF032E01+ TAATGATTAAAATAATTAGTCTAATTTAATAATTTTAATTCATTTGATAATTATGGATTG
                      ____________________________________________________________
consensus TAATGATTAAAATAATTAGTCTAATTTAATAATTTTAATTCATTTGATAATTATGGATTG
 
. : . : . : . : . : . :
rJMSF032E01+ CTGCTAGTCCTCTACAGAGTTGGTGTTAGGGTTGTTGTTCTTATTATTATTCAATACTCA
                      ____________________________________________________________
consensus CTGCTAGTCCTCTACAGAGTTGGTGTTAGGGTTGTTGTTCTTATTATTATTCAATACTCA