Contig 002909:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009D15Sequence228011922 (2)765002909 (2)ref|XP_006343955.1|266PREDICTED: uncharacterized protein LOC102590970 [Solanum tuberosum]
JMSF032C06Sequence707011922 (2)ref|XP_011022644.1|8e-13PREDICTED: uncharacterized protein LOC105124354 isoform X1 [Populus euphratica]707002909 (2)ref|XP_006343955.1|203PREDICTED: uncharacterized protein LOC102590970 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF009D15+                       TGTGACGGGAAACAACAGAACAAAGAGTGTTTTGCTTGGCCTGCAGG
                      ____________________________________________________________
consensus                          TGTGACGGGAAACAACAGAACAAAGAGTGTTTTGCTTGGCCTGCAGG
 
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rJMSF009D15+          GTGTTGTCAAGAAGGCTGTTGGGCTTGGTGGTTGG-CACTGGCTGGTTCTGAAGAATGGA
rJMSF032C06+                       GGCTGTTGGGCTTGGTGGTTGGNCACTGGCTGGTTCTGAAGAATGGA
                      ____________________________________________________________
consensus             GTGTTGTCAAGAAGGCTGTTGGGCTTGGTGGTTGGNCACTGGCTGGTTCTGAAGAATGGA
 
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rJMSF009D15+          GTTGAAGTGAAGCTCCAAAGGAATGCCTTGAGCGTGTTGGAGGCTCCCACTGGGGATGAA
rJMSF032C06+          GTTGAAGTGAAGCTCCAAAGGAATGCCTTGAGCGTGTTGGAGGCTCCCACTGGGGATGAA
                      ____________________________________________________________
consensus             GTTGAAGTGAAGCTCCAAAGGAATGCCTTGAGCGTGTTGGAGGCTCCCACTGGGGATGAA
 
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rJMSF009D15+          GATGATGATTATGACTTTGATGACTCTAGCAGTGGTTCTGAAGTTGGTGAAAAGGACAAT
rJMSF032C06+          GATGATGATTATGACTTTGATGACTCTAGCAGTGGTTCTGAAGTTGGTGAAAAGGACAAT
                      ____________________________________________________________
consensus             GATGATGATTATGACTTTGATGACTCTAGCAGTGGTTCTGAAGTTGGTGAAAAGGACAAT
 
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rJMSF009D15+          CATCATTTTCCAACTGGCGTTGAGTACAGAAAGGTTAGCAAGCCAAGGGTTCGTTATACA
rJMSF032C06+          CATCATTTTCCAACTGGCGTTGAGTACAGAAAGGTTAGCAAGCCAAGGGTTCGTTATACA
                      ____________________________________________________________
consensus             CATCATTTTCCAACTGGCGTTGAGTACAGAAAGGTTAGCAAGCCAAGGGTTCGTTATACA
 
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rJMSF009D15+          AGGCCATGGGCAGCAACAAAATCAAATAGTCGGAGTAGTAGCAAAGATGTTGAAACTAAA
rJMSF032C06+          AGGCCATGGGCAGCAACAAAATCAAATAGTCGGAGTAGTAGCAAAGATGTTGAAACTAAA
                      ____________________________________________________________
consensus             AGGCCATGGGCAGCAACAAAATCAAATAGTCGGAGTAGTAGCAAAGATGTTGAAACTAAA
 
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rJMSF009D15+          TATTGCCATCTGTATCAACAGAGAGTGAACTTTGCAAAACTAGGAACCAGCTCATTGTGG
rJMSF032C06+          TATTGCCATCTGTATCAACAGAGAGTGAACTTTGCAAAACTAGGAACCAGCTCATTGTGG
                      ____________________________________________________________
consensus             TATTGCCATCTGTATCAACAGAGAGTGAACTTTGCAAAACTAGGAACCAGCTCATTGTGG
 
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rJMSF009D15+          AGATATTGGCGAAGCCACAACCTCGCAAGTATAAGTACTCCCAACCCCACTAAGGATCAA
rJMSF032C06+          AGATATTGGCGAAGCCACAACCTCGCAAGTATAAGTACTCCCAACCCCACTAAGGATCAA
                      ____________________________________________________________
consensus             AGATATTGGCGAAGCCACAACCTCGCAAGTATAAGTACTCCCAACCCCACTAAGGATCAA
 
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rJMSF009D15+          TTGGTTAACGCAGTACAACGGCATTTTGCAGCACAGCGGGTTGACGAGGTGCAAGTGGTG
rJMSF032C06+          TTGGTTAACGCAGTACAACGGCATTTTGCAGCACAGCGGGTTGACGAGGTGCAAGTGGTG
                      ____________________________________________________________
consensus             TTGGTTAACGCAGTACAACGGCATTTTGCAGCACAGCGGGTTGACGAGGTGCAAGTGGTG
 
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rJMSF009D15+          GTGGAATTCATCCGTGCTGCCAAGAGACTCAGATCAGCTGACCCGCATTGAGATTGATCG
rJMSF032C06+          GTGGAATTCATCCGTGCTGCCAAGAGACTCAGATCAGCTGACCCGCATTGAGATTGATCG
                      ____________________________________________________________
consensus             GTGGAATTCATCCGTGCTGCCAAGAGACTCAGATCAGCTGACCCGCATTGAGATTGATCG
 
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rJMSF009D15+          GTGAAAGACTGTGTGTGTTCGGATTTGTAATATATATATCTCTATATATATATAAATATA
rJMSF032C06+          GTGAAAGACTGTGTGTGTTCGGATTTGTAATATATATATCTCTATATATATATAAATATA
                      ____________________________________________________________
consensus             GTGAAAGACTGTGTGTGTTCGGATTTGTAATATATATATCTCTATATATATATAAATATA
 
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rJMSF009D15+          TGCATGCATATAACGTATATACATATGAACAACCCTAACTTAGTCCGCTAATTATAAACT
rJMSF032C06+          TGCATGCATATAACGTATATACATATGAACAACCCTAACTTAGTCCGCTAATTATAAACT
                      ____________________________________________________________
consensus             TGCATGCATATAACGTATATACATATGAACAACCCTAACTTAGTCCGCTAATTATAAACT
 
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rJMSF009D15+          TACAAATGAAGAGTGGGAGCTTCTTTGTCAGCTCACTCCCACCTCTCTCGGATCCTAAC 
rJMSF032C06+          TACAAATGAAGAGTGGGAGCTTCTTTGTCAGCTCACTCCCACCTCTCTCGGATCCTAACC
                      ____________________________________________________________
consensus             TACAAATGAAGAGTGGGAGCTTCTTTGTCAGCTCACTCCCACCTCTCTCGGATCCTAACC