Contig 002901:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016N11Sequence525002901 (3)gb|KJB63056.1|1e-94hypothetical protein B456_009G451500 [Gossypium raimondii]734002901 (3)ref|XP_009770032.1|4e-44PREDICTED: serine/threonine-protein kinase D6PKL2-like [Nicotiana sylvestris]
JMSF030M12Sequence654018953733002901 (3)ref|XP_006449950.1|2e-45hypothetical protein CICLE_v10014638mg [Citrus clementina] ref|XP_006449951.1| h

Alignment

This contig is upended


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JMFF016N11-                                             AAGATGGGCATATAATGCTCTCAGAC
                      ____________________________________________________________
consensus                                               AAGATGGGCATATAATGCTCTCAGAC
 
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JMFF016N11-           TTTGACCTTTCACTGCGTTGTGCCGTGAGTCCAACACTTGTCAAATCTTTAGATTCAGAA
                      ____________________________________________________________
consensus             TTTGACCTTTCACTGCGTTGTGCCGTGAGTCCAACACTTGTCAAATCTTTAGATTCAGAA
 
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JMFF016N11-           CCTCTCCAGAAGAGCCCTGGTTTCTGTGTCCAGCCAGCTTGCATTCAACCATCGTGTGCT
                      ____________________________________________________________
consensus             CCTCTCCAGAAGAGCCCTGGTTTCTGTGTCCAGCCAGCTTGCATTCAACCATCGTGTGCT
 
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JMFF016N11-           GTTACCACATCATGTTTCACTCCCCGTTTCTTTTCTAGCAAGTCCAAGAAGAAGGACCGA
                      ____________________________________________________________
consensus             GTTACCACATCATGTTTCACTCCCCGTTTCTTTTCTAGCAAGTCCAAGAAGAAGGACCGA
 
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JMFF016N11-           AAATCCAAAGCTGATATTGGCACTCAGGTTACCCCTCTACCTGAACTAGTTGCAGAACCT
                      ____________________________________________________________
consensus             AAATCCAAAGCTGATATTGGCACTCAGGTTACCCCTCTACCTGAACTAGTTGCAGAACCT
 
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JMFF016N11-           ACTAGTGCTAGGTCCATGTCATTTGTGGGGACCCATGAATACTTGGCACCTGAAATTATT
                      ____________________________________________________________
consensus             ACTAGTGCTAGGTCCATGTCATTTGTGGGGACCCATGAATACTTGGCACCTGAAATTATT
 
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JMFF016N11-           AAAGGTGAAGGCCATGGTAGTGCTGTAGATTGGTGGACCTTTGGGATCTTCCTTTACGAG
                      ____________________________________________________________
consensus             AAAGGTGAAGGCCATGGTAGTGCTGTAGATTGGTGGACCTTTGGGATCTTCCTTTACGAG
 
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JMFF016N11-           CTTTTGTTTGGTAAAACCCCATTTAAAGGATCTGGGAACCGAGCCACATTGTTCAATGTT
                      ____________________________________________________________
consensus             CTTTTGTTTGGTAAAACCCCATTTAAAGGATCTGGGAACCGAGCCACATTGTTCAATGTT
 
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JMFF016N11-           GTTGGCCAGCCTCTTAGATTTCCAGAATCACCAGTTGTCAGCTTTGCAGCTAGGGATCTT
rJMFF016N11+                        TAGATTTCCAGAATCACCAGTTGTCAGCTTTGCAGCTAGGGATCTT
rJMSF030M12+                                                         AGCTAGGGATCTT
                      ____________________________________________________________
consensus             GTTGGCCAGCCTCTTAGATTTCCAGAATCACCAGTTGTCAGCTTTGCAGCTAGGGATCTT
 
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JMFF016N11-           ATAAGGGGCCTGCTCATTA                                         
rJMFF016N11+          ATAAGGGGCCTGCTCATTAAAGAACCACAGCATAGATTGGCTTACAAAAGAGGAGCAACT
rJMSF030M12+          ATAAGGGGCCTGCTCATTAAAGAACCACAGCATAGATTGGCTTACAAAAGAGGAGCAACT
                      ____________________________________________________________
consensus             ATAAGGGGCCTGCTCATTAAAGAACCACAGCATAGATTGGCTTACAAAAGAGGAGCAACT
 
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rJMFF016N11+          GAAATAAAACAGCACCCTTTCTTTGAAGGAGTGAATTGGGCATTGATACGCTGTGCTTCC
rJMSF030M12+          GAAATAAAACAGCACCCTTTCTTTGAAGGAGTGAATTGGGCATTGATACGCTGTGCTTCC
                      ____________________________________________________________
consensus             GAAATAAAACAGCACCCTTTCTTTGAAGGAGTGAATTGGGCATTGATACGCTGTGCTTCC
 
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rJMFF016N11+          CNTCCTGAGATCCCAAAGCCAGTTGAATTTGAGCGTATTCCACCTCCAGCAGCATCAACT
rJMSF030M12+          CCTCCTGAGATCCCAAAGCCAGTTGAATTTGAGCGTATTCCACCTCCAGCAGCATCAACT
                      ____________________________________________________________
consensus             CCTCCTGAGATCCCAAAGCCAGTTGAATTTGAGCGTATTCCACCTCCAGCAGCATCAACT
 
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rJMFF016N11+          AGTGAAAAGACTGCTCTTACTGCGGTGCCTCCTAATC-AAAAAATTCTAATAATTACCTT
rJMSF030M12+          AGTGAAAAGACTGCTCTTACTGCGGTGCCTCCTAATCAAAAAAATTCTAATAATTACCTT
                      ____________________________________________________________
consensus             AGTGAAAAGACTGCTCTTACTGCGGTGCCTCCTAATCAAAAAAATTCTAATAATTACCTT
 
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rJMFF016N11+          GAGTTTGATTTCTTTTAGTAAATATTACTAGTATAACTGAGATTCAAGGAGAACATACTT
rJMSF030M12+          GAGTTTGATTTCTTTTAGTAAATATTACTAGTATAACTGAGATTCAAGGAGAACATACTT
                      ____________________________________________________________
consensus             GAGTTTGATTTCTTTTAGTAAATATTACTAGTATAACTGAGATTCAAGGAGAACATACTT
 
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rJMFF016N11+          GTATACATTCTGAGAAATTTTGGATTTCTAGTGGACTGAATGGCAGATTCCTCGGCAAAA
rJMSF030M12+          GTATACATTCTGAGAAATTTTGGATTTCTAGTGGACTGAATGGCAGATTCCTCGGCAAAA
                      ____________________________________________________________
consensus             GTATACATTCTGAGAAATTTTGGATTTCTAGTGGACTGAATGGCAGATTCCTCGGCAAAA
 
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rJMFF016N11+          TCTTATTGGAGGAACAAAGTATGCTTTGTTTTTGCTGCATGTAACATGCAACTGTTTACC
rJMSF030M12+          TCTTATTGGAGGAACAAAGTATGCTTTGTTTTTGCTGCATGTAACATGCAACTGTTTACC
                      ____________________________________________________________
consensus             TCTTATTGGAGGAACAAAGTATGCTTTGTTTTTGCTGCATGTAACATGCAACTGTTTACC
 
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rJMFF016N11+          TTCAGTCTCCTGCCTGTATGACAATTATGTCTTAGAAGATACGAGGGTGGTGCTATCCAA
rJMSF030M12+          TTCAGTCTCCTGCCTGTATGACAATTATGTCTTAGAAGATACGAGGGTGGTGCTATCCAA
                      ____________________________________________________________
consensus             TTCAGTCTCCTGCCTGTATGACAATTATGTCTTAGAAGATACGAGGGTGGTGCTATCCAA
 
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rJMFF016N11+          GTCACAAATCTCAAGTTGAAGAAATACATTTTTATGGGTTGGAACTTTCTGATCAGTGTT
rJMSF030M12+          GTCACAAATCTCAAGTTGAAGAAATACATTTTTATGGGTTGGAACTTTCTGATCAGTGTT
                      ____________________________________________________________
consensus             GTCACAAATCTCAAGTTGAAGAAATACATTTTTATGGGTTGGAACTTTCTGATCAGTGTT
 
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rJMFF016N11+          TGGCTTATGTAGGGTAATGTAAGGATTGTAAATCTTGAAGAAATCCCATTTGGCTCCCAC
rJMSF030M12+          TGGCTTATGTAGGGTAATGTAAGGATTGTAAATCTTGAAGAAATCCCATTTGGCTCCCAC
                      ____________________________________________________________
consensus             TGGCTTATGTAGGGTAATGTAAGGATTGTAAATCTTGAAGAAATCCCATTTGGCTCCCAC
 
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rJMFF016N11+          AAGCAATTAAATCATTGCTGAATGTATAGTTTGTTACGTTACGTTACTACAGAATTGCTC
rJMSF030M12+          AAGCAATTAAATCATTGCTGAATGTATAGTTTGTTACGTTACGTTACTACAGAATTGCTC
                      ____________________________________________________________
consensus             AAGCAATTAAATCATTGCTGAATGTATAGTTTGTTACGTTACGTTACTACAGAATTGCTC
 
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rJMFF016N11+          TTTGATCAAAGGTTTAGCAGAACCAAGTT                               
rJMSF030M12+          TTTGATCAAAGGTTTAGCAGAACCAAGTTTGGTTGTGCTCCAGACTTTCTAATGTTGGTG
                      ____________________________________________________________
consensus             TTTGATCAAAGGTTTAGCAGAACCAAGTTTGGTTGTGCTCCAGACTTTCTAATGTTGGTG