Contig 002900:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF030A08-                                                                  GGGCT
                      ____________________________________________________________
consensus                                                                    GGGCT
 
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JMSF030A08-           TCTTCCATCTTCATCAATGGGAGCCGACAACCACCAGCCACCATCTCCACTCCAAGCATC
                      ____________________________________________________________
consensus             TCTTCCATCTTCATCAATGGGAGCCGACAACCACCAGCCACCATCTCCACTCCAAGCATC
 
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JMSF030A08-           TCTCTCTCTTAATCTCCCTCACTTCCACGGACGCAGCCACCTTTAACCTCTCGTCCCCGC
rJMSF030A08+                             CACTTCCACGGACGCAGCCACCTTTAACCTCTCGTCCCCGC
                      ____________________________________________________________
consensus             TCTCTCTCTTAATCTCCCTCACTTCCACGGACGCAGCCACCTTTAACCTCTCGTCCCCGC
 
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JMSF030A08-           TCTCTTTCTCGACATAGTCGACGGAAGAAGCAGATCGACACAGCACCGGCGACCTCTAGC
rJMSF032A08+                   CGACATAGTCGACGGAAGAAGCAGATCGACACAGCACCGGCGACCTCTAGC
rJMSF030A08+          TCTCTTTCTCGACATAGTCGACGGAAGAAGCAGATCGACACAGCACCGGCGACCTCTAGC
                      ____________________________________________________________
consensus             TCTCTTTCTCGACATAGTCGACGGAAGAAGCAGATCGACACAGCACCGGCGACCTCTAGC
 
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JMSF030A08-           TCCAGTGACGGTCCTCTCCGGTGATAGGCGGCAGATCTGGCGAAGGAGCAGCATTAGTGA
rJMSF032A08+          TCCAGTGACGGTCCTCTCCGGTGATAGGCGGCAGATCTGGCGAAGGAGCAGCATTAGTGA
rJMSF030A08+          TCCAGTGACGGTCCTCTCCGGTGATAGGCGGCAGATCTGGCGAAGGAGCAGCATTAGTGA
                      ____________________________________________________________
consensus             TCCAGTGACGGTCCTCTCCGGTGATAGGCGGCAGATCTGGCGAAGGAGCAGCATTAGTGA
 
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JMSF030A08-           CCTATCCTTGGTCCTCTCTTTCCCTCGACGTAGCAGATCCGGCTGTTGAGTAGAGGAGAC
rJMSF032A08+          CCTATCCTTGGTCCTCTCTTTCCCTCGACGTAGCAGATCCGGCTGTTGAGTAGAGGAGAC
rJMSF030A08+          CCTATCCTTGGTCCTCTCTTTCCCTCGACGTAGCAGATCCGGCTGTTGAGTAGAGGAGAC
                      ____________________________________________________________
consensus             CCTATCCTTGGTCCTCTCTTTCCCTCGACGTAGCAGATCCGGCTGTTGAGTAGAGGAGAC
 
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JMSF030A08-           GCGACGAACGGCGGCTACGACCTCCATGGACTCCGGCGAACAGCTGCAGCGGCAAGGTTT
rJMSF032A08+          GCGACGAACGGCGGCTACGACCTCCATGGACTCCGGCGAACAGCTGCAGCGGCAAGGTTT
rJMSF030A08+          GCGACGAACGGCGGCTACGACCTCCATGGACTCCGGCGAACAGCTGCAGCGGCAAGGTTT
                      ____________________________________________________________
consensus             GCGACGAACGGCGGCTACGACCTCCATGGACTCCGGCGAACAGCTGCAGCGGCAAGGTTT
 
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JMSF030A08-           CCCCTATTTCGGCGCGAACAGCTGTAGCGGCAAGGTTTCCCCTGTTTCGGCGCGAACAGA
rJMSF032A08+          CCCCTATTTCGGCGCGAACAGCTGTAGCGGCAAGGTTTCCCCTGTTTCGGCGCGAACAGA
rJMSF030A08+          CCCCTATTTCGGCGCGAACAGCTGTAGCGGCAAGGTTTCCCCTGTTTCGGCGCGAACAGA
                      ____________________________________________________________
consensus             CCCCTATTTCGGCGCGAACAGCTGTAGCGGCAAGGTTTCCCCTGTTTCGGCGCGAACAGA
 
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JMSF030A08-           GCTCCTCCTCGGTCGAAGAAAGCAGTTTCTCCGACGAACTAATGGCGGTGTCCGGCAGGC
rJMSF032A08+          GCTCCTCCTCGGTCGAAGAAAGCAGTTTCTCCGACGAACTAATGGCGGTGTCCGGCAGGC
rJMSF030A08+          GCTCCTCCTCGGTCGAAGAAAGCAGTTTCTCCGACGAACTAATGGCGGTGTCCGGCAGGC
                      ____________________________________________________________
consensus             GCTCCTCCTCGGTCGAAGAAAGCAGTTTCTCCGACGAACTAATGGCGGTGTCCGGCAGGC
 
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JMSF030A08-           CTGTGTTCGGCGGAGTATTCCGACGAGCAGAGCGGTTCGGTGGCGGGCATATTCCAGCGG
rJMSF032A08+          CTGTGTTCGGCGGAGTATTC                                        
rJMSF030A08+          CTGTGTTCGGCGGAGTATTCCGACGAGCAGAGCGGTTCGGTGGCGGGCATATTCCAGCGG
                      ____________________________________________________________
consensus             CTGTGTTCGGCGGAGTATTCCGACGAGCAGAGCGGTTCGGTGGCGGGCATATTCCAGCGG
 
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JMSF030A08-           CGGCACGGTGGGAATCTCTCCGACGTGGGTAGTGCAACTCGACAGTGGCGTANGTGAGGT
rJMSF030A08+          CGGCACGGTGGGAATCTCTCCGACGTGGGTAGTGCAACTCGACAGTGGCGTAGGTGAGGT
                      ____________________________________________________________
consensus             CGGCACGGTGGGAATCTCTCCGACGTGGGTAGTGCAACTCGACAGTGGCGTAGGTGAGGT
 
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JMSF030A08-           TTTGCCTTCTTGTTGATAAAGCTTAGTATGAA                            
rJMSF030A08+          TTTGCCTTCTTGTTGATAAAGCTTAGTATGAAGGTGAAATGATATGGTTATTAATGTGAT
                      ____________________________________________________________
consensus             TTTGCCTTCTTGTTGATAAAGCTTAGTATGAAGGTGAAATGATATGGTTATTAATGTGAT
 
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rJMSF030A08+          TAAGGTGTTAATGGTTATTAAGGTGGTTTTAGCTAGACGAAGATGAACAAGATTGTGTTG
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consensus             TAAGGTGTTAATGGTTATTAAGGTGGTTTTAGCTAGACGAAGATGAACAAGATTGTGTTG
 
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rJMSF030A08+          CTACTACTAATGTTGTTTATTAAAAGGTTTCAATAATGTGTAAATATAATCGGTGATATT
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consensus             CTACTACTAATGTTGTTTATTAAAAGGTTTCAATAATGTGTAAATATAATCGGTGATATT