Contig 002889:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF015A21-                                                             GAGTGCTCCA
                      ____________________________________________________________
consensus                                                               GAGTGCTCCA
 
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JMSF015A21-           CGACCTCTGCTTGTAAAGTTTGTATGGCTGAAAATGGATATGAATTAACGCCATTAACGG
                      ____________________________________________________________
consensus             CGACCTCTGCTTGTAAAGTTTGTATGGCTGAAAATGGATATGAATTAACGCCATTAACGG
 
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JMSF015A21-           TCAGTTTCCAGTTTCCAGTTTCCTTGTATCGAACTTTCTATAAGAACGTTGTGTTTCGAC
                      ____________________________________________________________
consensus             TCAGTTTCCAGTTTCCAGTTTCCTTGTATCGAACTTTCTATAAGAACGTTGTGTTTCGAC
 
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JMSF015A21-           TATATGGATTCTGATTGTTCAGTGTTTGGATAATGAGTGCGGCTTGTTATGGGGGATTTC
JMSF028I22-                     CTGATTGTTCAGTGTTTGGATAATGAGTGCGGCTTGTTATGGGGGATTTC
                      ____________________________________________________________
consensus             TATATGGATTCTGATTGTTCAGTGTTTGGATAATGAGTGCGGCTTGTTATGGGGGATTTC
 
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JMSF015A21-           GACACCATCCCCGGTTGGGATTGTGCAATTCCAGGATAGTGTGTTTATCGGAATCCGGCG
JMSF028I22-           GACACCATCCCCGGTTGGGATTGTGCAATTCCAGGATAGTGTGTTTATCGGAATCCGGCG
                      ____________________________________________________________
consensus             GACACCATCCCCGGTTGGGATTGTGCAATTCCAGGATAGTGTGTTTATCGGAATCCGGCG
 
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JMSF015A21-           GTGGAGTACGGTGGCAATTACTGAAAAGAGTGGATGAGGAGCTGAGCAAAGGAGATGAAA
JMSF028I22-           GTGGAGTACGGTGGCAATTACTGAAAAGAGTGGATGAGGAGCTGAGCAAAGGAGATGAAA
                      ____________________________________________________________
consensus             GTGGAGTACGGTGGCAATTACTGAAAAGAGTGGATGAGGAGCTGAGCAAAGGAGATGAAA
 
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JMSF015A21-           GAGCAGCACTGTCCCTAGTTAAAGACTTGCAAGGCAAACCCGGCGGCCTCAGGTGTTTCG
JMSF028I22-           GAGCAGCACTGTCCCTAGTTAAAGACTTGCAAGGCAAACCCGGCGGCCTCAGGTGTTTCG
                      ____________________________________________________________
consensus             GAGCAGCACTGTCCCTAGTTAAAGACTTGCAAGGCAAACCCGGCGGCCTCAGGTGTTTCG
 
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JMSF015A21-           GCGCCGCCCGCCAGATACCCCAGCAACTATATTCGTTGGAGGAGCTGAGATTGAATGGAA
JMSF028I22-           GCGCCGCCCGCCAGATACCCCAGCAACTATATTCGTTGGAGGAGCTGAGATTGAATGGAA
                      ____________________________________________________________
consensus             GCGCCGCCCGCCAGATACCCCAGCAACTATATTCGTTGGAGGAGCTGAGATTGAATGGAA
 
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JMSF015A21-           TAGAAACCGTGTCTCTTTTATCACCAGTTGATGCCACA                      
JMSF028I22-           TAGAAACCGTGTCTCTTTTATCACCAGTTGATGCCACACTGGGCTCCATAGAAAGAAACC
                      ____________________________________________________________
consensus             TAGAAACCGTGTCTCTTTTATCACCAGTTGATGCCACACTGGGCTCCATAGAAAGAAACC
 
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JMSF028I22-           TCCAAATTGCAGCTTTATCTGGTGGGGTAGCTGCTTGGAATGTGCTAAACTTAAACCCTC
rJMSF015A21+                               GTGGGGTAGCTGCTTGGAATGTGCTAAACTTAAACCCTC
                      ____________________________________________________________
consensus             TCCAAATTGCAGCTTTATCTGGTGGGGTAGCTGCTTGGAATGTGCTAAACTTAAACCCTC
 
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JMSF028I22-           AACAGATCCTCTACATCTCTTTGGGACTTTTGTTTTTGTTGACATTTGACTCGGTATCCT
rJMSF015A21+          AACAGATCCTCTACATCTCTTTGGGACTTTTGTTTTTGTTGACATTTGACTCGGTATCCT
                      ____________________________________________________________
consensus             AACAGATCCTCTACATCTCTTTGGGACTTTTGTTTTTGTTGACATTTGACTCGGTATCCT
 
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JMSF028I22-           TTAATGGAGGGTTCGGTGCCTTGATTCTAGATACCATTGGTCATACCCTCAGCGAAAAAT
rJMSF015A21+          TTAATGGAGGGTTCGGTGCCTTGATTCTAGATACCATTGGTCATACCCTCAGCGAAAAAT
                      ____________________________________________________________
consensus             TTAATGGAGGGTTCGGTGCCTTGATTCTAGATACCATTGGTCATACCCTCAGCGAAAAAT
 
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JMSF028I22-           ACCACAACAGGGTTATTCAGCATGAAGCAGGGCATTTCTTGATTGCCTACTTGCTAGGAA
rJMSF015A21+          ACCACAACAGGGTTATTCAGCATGAAGCAGGGCATTTCTTGATTGCCTACTTGCTAGGAA
                      ____________________________________________________________
consensus             ACCACAACAGGGTTATTCAGCATGAAGCAGGGCATTTCTTGATTGCCTACTTGCTAGGAA
 
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JMSF028I22-           TCCTTCCTAGGGGGTACACACTTACCAGTTTGGAAGCTTTGAAGAAGGAAGGATCACTTA
rJMSF015A21+          TCCTTCCTAGGGGGTACACACTTACCAGTTTGGAAGCTTTGAAGAAGGAAGGATCACTTA
                      ____________________________________________________________
consensus             TCCTTCCTAGGGGGTACACACTTACCAGTTTGGAAGCTTTGAAGAAGGAAGGATCACTTA
 
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JMSF028I22-           ATGTTCAAGCTGGGACAGCATTTGTGGACTTTGAGT                        
rJMSF015A21+          ATGTTCAAGCTGGGACAGCATTTGTGGACTTTGAGTTCCTCGAGGAACAGGTGTAGCTAC
rJMSF028I22+                                                         CAGGTGTAGCTAC
                      ____________________________________________________________
consensus             ATGTTCAAGCTGGGACAGCATTTGTGGACTTTGAGTTCCTCGAGGAACAGGTGTAGCTAC
 
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rJMSF015A21+          AGAGTATCTTCTATTCGGATGTGCAGAGGGAGGACTTGCAGATATTAACCAGTTGGACTT
rJMSF028I22+          AGAGTATCTTCTATTCGGATGTGCAGAGGGAGGACTTGCAGATATTAACCAGTTGGACTT
                      ____________________________________________________________
consensus             AGAGTATCTTCTATTCGGATGTGCAGAGGGAGGACTTGCAGATATTAACCAGTTGGACTT
 
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rJMSF015A21+          TCTACTGCAAAGCCTGGGGTTTACACAGAAAAAGGCAGATTCTCAGGTGAGATGGGCTGT
rJMSF028I22+          TCTACTGCAAAGCCTGGGGTTTACACAGAAAAAGGCAGATTCTCAGGTGAGATGGACTGT
                      ____________________________________________________________
consensus             TCTACTGCAAAGCCTGGGGTTTACACAGAAAAAGGCAGATTCTCAGGTGAGATGGGCTGT
 
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rJMSF015A21+          ACTGAACACTATACTCATTCTGCGCCGCCATGAGAATGCCCGAGCAAAGCTTGCCGAGGG
rJMSF028I22+          ACTGAACACTATACTCATTCTGCGCCGCCATGAGAATGCCCGAGCAAAGCTTGCCGAGGG
                      ____________________________________________________________
consensus             ACTGAACACTATACTCATTCTGCGCCGCCATGAGAATGCCCGAGCAAAGCTTGCCGAGGG
 
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rJMSF015A21+          AATGTCTGAGGGAAGATCTGTGGGCTTTTGCATTGACATTATAGAGAAAAGCATAAGTGA
rJMSF028I22+          AATGTCTGAGGGAAGATCTGTGGGCTTTTGCATTGACATTATAGAGAAAAGCATAAGTGA
                      ____________________________________________________________
consensus             AATGTCTGAGGGAAGATCTGTGGGCTTTTGCATTGACATTATAGAGAAAAGCATAAGTGA
 
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rJMSF015A21+          TGATGACTTGTAATTCTTCTTATACTTTTGCCTTAAAAGAAGAGTAATCATTGATTTATA
rJMSF028I22+          TGATGACTTGTAATTCTTCTTATACTTTTGCCTTAAAAGAAGAGTAATCATTGATTTATA
                      ____________________________________________________________
consensus             TGATGACTTGTAATTCTTCTTATACTTTTGCCTTAAAAGAAGAGTAATCATTGATTTATA
 
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rJMSF015A21+          TTTTTGCCTCTGTATTCTCATATCATGTATCAGAGTTTTCTTCTGCTTGTATGTATAATT
rJMSF028I22+          TTTTTGCCTCTGTATTCTCATATCATGTATCAGAGTTTTCTTCTGCTTGTATGTATAATT
                      ____________________________________________________________
consensus             TTTTTGCCTCTGTATTCTCATATCATGTATCAGAGTTTTCTTCTGCTTGTATGTATAATT
 
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rJMSF015A21+          TTCTTGCCTATGCAGTATGATGCCATGTAATGTGTACATATAGTCATTCT          
rJMSF028I22+          TTCTTGCCTATGCAGTATGATGCCATGTAATGTGTACATATAGTCATTCTTGCAGGTACT
                      ____________________________________________________________
consensus             TTCTTGCCTATGCAGTATGATGCCATGTAATGTGTACATATAGTCATTCTTGCAGGTACT