Contig 002886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002H08Sequence356002049 (3)ref|XP_009802572.1|1e-05PREDICTED: endoglucanase 24-like [Nicotiana sylvestris]686002886 (3)emb|CDO96993.1|4e-89unnamed protein product [Coffea canephora]
JMSF028G06Sequence679002049 (3)emb|CDO96993.1|6e-94unnamed protein product [Coffea canephora]759002886 (3)emb|CDO96993.1|2e-105unnamed protein product [Coffea canephora]
JMSF047N14Sequence680002049 (3)emb|CDO96993.1|1e-103unnamed protein product [Coffea canephora]767002886 (3)ref|XP_009631305.1|5e-108PREDICTED: endoglucanase 24-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047N14+ ANGGGAACATCTATTCTTTGCAATCATATAAAGCCTCAGCAGATAGCTTCATGT
rJMSF028G06+ CTTTGCAATCATATAAAGCCTCAGCAGATAGCTTCATGT
                      ____________________________________________________________
consensus ANGGGAACATCTATTCTTTGCAATCATATAAAGCCTCAGCAGATAGCTTCATGT
 
. : . : . : . : . : . :
rJMSF047N14+ GCACACTGATCCCGGAATCGCCGTCGTCCCACATCGAATACACGCCGGGCGGCCTGATTT
rJMSF002H08+ CGAATACACGCCGGGCGGCCTGATTT
rJMSF028G06+ GCACACTGATCCCGGAATCGCCGTCGTCCCACATCGAATACACGCCGGGCGGCCTGATTT
                      ____________________________________________________________
consensus GCACACTGATCCCGGAATCGCCGTCGTCCCACATCGAATACACGCCGGGCGGCCTGATTT
 
. : . : . : . : . : . :
rJMSF047N14+ ACAAGCCCGGCGGCAGCAATCTGCAGCACGCAACCTTAGTGAGTCTGATGTTGTTGGTCT
rJMSF002H08+ ACAAGCCCGGCGGCAGCAATCTGCAGCACGCAACCTTAGTGAGTCTGATGTTGTTGGTCT
rJMSF028G06+ ACAAGCCCGGCGGCAGCAATCTGCAGCACGCAACCTTAGTGAGTCTGATGTTGTTGGTCT
                      ____________________________________________________________
consensus ACAAGCCCGGCGGCAGCAATCTGCAGCACGCAACCTTAGTGAGTCTGATGTTGTTGGTCT
 
. : . : . : . : . : . :
rJMSF047N14+ ACGCCGCCTCCTTAGAGCGGTCGTCGCAGGCCGTGAACTGCGGCAGCGTTAGCGTCAGCC
rJMSF002H08+ ACGCCGCCTCCTTAGAGCGGTCGTCGCAGGCCGTGAACTGCGGCAGCGTTAGCGTCAGCC
rJMSF028G06+ ACGCCGCCTCCTTAGAGCGGTCGTCGCAGGCCGTGAACTGCGGCAGCGTTAGCGTCAGCC
                      ____________________________________________________________
consensus ACGCCGCCTCCTTAGAGCGGTCGTCGCAGGCCGTGAACTGCGGCAGCGTTAGCGTCAGCC
 
. : . : . : . : . : . :
rJMSF047N14+ CCGCCATGCTCCGGGAAGTGGCTAAGCGGCAGGTTGATTACATCTTAGGCGACAACCCTA
rJMSF002H08+ CCGCCATGCTCCGGGAAGTGGCTAAGCGGCAGGTTGATTACATCTTAGGCGACAACCCTA
rJMSF028G06+ CCGCCATGCTCCGGGAAGTGGCTAAGCGGCAGGTTGATTACATCTTAGGCGACAACCCTA
                      ____________________________________________________________
consensus CCGCCATGCTCCGGGAAGTGGCTAAGCGGCAGGTTGATTACATCTTAGGCGACAACCCTA
 
. : . : . : . : . : . :
rJMSF047N14+ AAGGAATCTCGTACATGGTCGGGTACAGTTACTACTATCCTCAACGGATTCATCACCGCG
rJMSF002H08+ AAGGAATCTCGTACATGGTCGGGTACAGTTACTACTATCCTCAACGGATTCATCACCGCG
rJMSF028G06+ AAGGAATCTCGTACATGGTCGGGTACAGTTACTACTATCCTCAACGGATTCATCACCGCG
                      ____________________________________________________________
consensus AAGGAATCTCGTACATGGTCGGGTACAGTTACTACTATCCTCAACGGATTCATCACCGCG
 
. : . : . : . : . : . :
rJMSF047N14+ GCTCGTCTCTCCCCTCGACCAAGGATCATCCGCAGTTCATAGCATGCAAAGAGGGATCCG
rJMSF002H08+ GCTCGTCTCTCCCCTCGACCAAGGATCATCCGCAGTTCATAGCATGCAAAGAGGGATCCG
rJMSF028G06+ GCTCGTCTCTCCCCTCGACCAAGGATCATCCGCAGTTCATAGCATGCAAAGAGGGATCCG
                      ____________________________________________________________
consensus GCTCGTCTCTCCCCTCGACCAAGGATCATCCGCAGTTCATAGCATGCAAAGAGGGATCCG
 
. : . : . : . : . : . :
rJMSF047N14+ TCTATTTCAACTCGTCGGGTCCTAACCCGAACGTGTTAGTCGGGGCGATCGTCGGCGGGC
rJMSF002H08+ TCTATTTCAACTCGTCGGGTCCTAACCCGAACGTGTTAGTCGGGGCGATCGTCGGCGGGC
rJMSF028G06+ TCTATTTCAACTCGTCGGGTCCTAACCCGAACGTGTTAGTCGGGGCGATCGTCGGCGGGC
                      ____________________________________________________________
consensus TCTATTTCAACTCGTCGGGTCCTAACCCGAACGTGTTAGTCGGGGCGATCGTCGGCGGGC
 
. : . : . : . : . : . :
rJMSF047N14+ CGGGGGAGAACGATGAGTACGACGATGACCGCGACGATTTTCGGAAGTCGGAGCCGACAA
rJMSF002H08+ CGGGGGAGAACGATGAGTACGACGATGACCGCGACGATTTTCGGAAGTCGGAGCCGACAA
rJMSF028G06+ CGGGGGAGAACGATGAGTACGACGATGACCGCGACGATTTTCGGAAGTCGGAGCCGACAA
                      ____________________________________________________________
consensus CGGGGGAGAACGATGAGTACGACGATGACCGCGACGATTTTCGGAAGTCGGAGCCGACAA
 
. : . : . : . : . : . :
rJMSF047N14+ CCTACATTAACGCGCCGTTCGTTGGCGCCCTTGCTTACTTTGCCGCTAATTATCCCAGTA
rJMSF002H08+ CCTACATTAACGCGCCGTTCGTTGGCGCCCTTGCTTACTTTGCCGCTAATTATCCCAGTA
rJMSF028G06+ CCTACATTAACGCGCCGTTCGTTGGCGCCCTTGCTTACTTTGCCGCTAATTATCCCAGTA
                      ____________________________________________________________
consensus CCTACATTAACGCGCCGTTCGTTGGCGCCCTTGCTTACTTTGCCGCTAATTATCCCAGTA
 
. : . : . : . : . : . :
rJMSF047N14+ ATTAAGATCATCAGTAAATGGCATCTGTACAGAGTTGGTGAATTACTGATCGATTGGGTA
rJMSF002H08+ ATTAAGATCATCAGTAAATGGCATCTGTACAGAGTTGGTGAATTACTGATCGATTGGGTA
rJMSF028G06+ ATTAAGATCATCAGTAAATGGCATCTGTACAGAGTTGGTGAATTACTGATCGATTGGGTA
                      ____________________________________________________________
consensus ATTAAGATCATCAGTAAATGGCATCTGTACAGAGTTGGTGAATTACTGATCGATTGGGTA
 
. : . : . : . : . : . :
rJMSF047N14+ TTTGCATTCGTGTGTGTAGGTGAACAAAAGATAGAATCTCTCACCTCTGGTAAGTCAAAG
rJMSF002H08+ TTTGCATTCATGTGTGTAGGTGAACAAAAGATAGAATCTCTCACCTCTGGTAAGTCAAAG
rJMSF028G06+ TTTGCATTCATGTGTGTAGGTGAACAAAAGATAGAATCTCTCACCTCTGGTAAGTCAAAG
                      ____________________________________________________________
consensus TTTGCATTCATGTGTGTAGGTGAACAAAAGATAGAATCTCTCACCTCTGGTAAGTCAAAG
 
. : . : . : . : . : . :
rJMSF047N14+ AGGGAAGAGGAGAGTCTTTATAATTTATATGTGTAATGTAATTTTCTCAATTA
rJMSF002H08+ AGGGAAGAGGAGAGTCTTTATAATTTATATGTGTAATGTAATTTTCTCAATTA
rJMSF028G06+ AGGGAAGAGGAGAGTCTTTATAATTTATATGTGTAATGTAATTTTCTCAATTACATTATT
                      ____________________________________________________________
consensus AGGGAAGAGGAGAGTCTTTATAATTTATATGTGTAATGTAATTTTCTCAATTACATTATT