Contig 002883:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF017H12+                                        CTTTCAATACGTGGAAAGATATTATCATCC
rJMSF028B12+                                                                     C
                      ____________________________________________________________
consensus                                           CTTTCAATACGTGGAAAGATATTATCATCC
 
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rJMFF017H12+          CCTGGAAATGTTGATGATGGGATGACTGCTCATGGCTCTAGGGTTGTTGAGCCTTTGCCT
rJMSF028B12+          CCTGGAAATGTTGATGATGGGATGACTGCTCATGGCTCTAGGGTTGTTGAGCCTTTGCCT
                      ____________________________________________________________
consensus             CCTGGAAATGTTGATGATGGGATGACTGCTCATGGCTCTAGGGTTGTTGAGCCTTTGCCT
 
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rJMFF017H12+          TTGTCAAAAAGGAAGTACTTGGCTAACTTTCTAGGTCGAGCGCAAGGAAAGGTTGGTCGT
rJMSF028B12+          TTGTCAAAAAGGAAGTACTTGGCTAACTTTCTAGGTCGAGCGCAAGGAAAGGTTGGTCGT
                      ____________________________________________________________
consensus             TTGTCAAAAAGGAAGTACTTGGCTAACTTTCTAGGTCGAGCGCAAGGAAAGGTTGGTCGT
 
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rJMFF017H12+          CTTCAATTGATTAAACTTGCAAAACAATTCCCAGAAAAGTTGGAATCTCCAGAGTTGAAA
rJMSF028B12+          CTTCAATTGATTAAACTTGCAAAACAATTCCCAGAAAAGTTGGAATCTCCAGAGTTGAAA
                      ____________________________________________________________
consensus             CTTCAATTGATTAAACTTGCAAAACAATTCCCAGAAAAGTTGGAATCTCCAGAGTTGAAA
 
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rJMFF017H12+          TTCAGTGGTCCTGATAAACTTGGACGAGTGCAATATTTTCAACATCTCCGCAATGCCAAG
rJMSF028B12+          TTCAGTGGTCCTGATAAACTTGGACGAGTGCAATATTTTCAACATCTCCGCAATGCCAAG
                      ____________________________________________________________
consensus             TTCAGTGGTCCTGATAAACTTGGACGAGTGCAATATTTTCAACATCTCCGCAATGCCAAG
 
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rJMFF017H12+          TTCTGCCTTGCTCCACGCGGTGAATCATCGTGGACTCTTCGGTTTTATGAGTCCTTTTTC
rJMSF028B12+          TTCTGCCTTGCTCCACGCGGTGAATCATCGTGGACTCTTCGGTTTTATGAGTCCTTTTTC
                      ____________________________________________________________
consensus             TTCTGCCTTGCTCCACGCGGTGAATCATCGTGGACTCTTCGGTTTTATGAGTCCTTTTTC
 
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rJMFF017H12+          GTGGAGTGTGTTCCAGTCCTCTTATCAGATCAAGTAGAAATGCCATTTCAAAATGTCATC
rJMSF028B12+          GTGGAGTGTGTTCCAGTCCTCTTATCAGATCAAGTAGAAATGCCATTTCAAAATGTCATC
                      ____________________________________________________________
consensus             GTGGAGTGTGTTCCAGTCCTCTTATCAGATCAAGTAGAAATGCCATTTCAAAATGTCATC
 
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rJMFF017H12+          GACTACACCCAGATATCAATCAAATGGCCATCCTCTCGGATAGGCACTGAACTTTTGGAG
rJMSF028B12+          GACTACACCCAGATATCAATCAAATGGCCATCCTCTCGGATAGGCACTGAACTTTTGGAG
                      ____________________________________________________________
consensus             GACTACACCCAGATATCAATCAAATGGCCATCCTCTCGGATAGGCACTGAACTTTTGGAG
 
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rJMFF017H12+          TACCTAGAGTCAATACCTGATAGGGAAATTGAGGAGATGATAGCCAGGGGTAGAAAAGTG
rJMSF028B12+          TACCTAGAGTCAATACCTGATAGGGAAATTGAGGAGATGATAGCCAGGGGTAGAAAAGTG
                      ____________________________________________________________
consensus             TACCTAGAGTCAATACCTGATAGGGAAATTGAGGAGATGATAGCCAGGGGTAGAAAAGTG
 
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rJMFF017H12+          AGGTGTTTATGGGCTTATTCTCCCGCACCTGATACTTGTTCTGCATTTAATGGAATCATT
rJMSF028B12+          AGGTGTTTATGGGCTTATTCTCCCGCACCTGATACTTGTTCTGCATTTAANGGAATCATT
                      ____________________________________________________________
consensus             AGGTGTTTATGGGCTTATTCTCCCGCACCTGATACTTGTTCTGCATTTAATGGAATCATT
 
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rJMFF017H12+          TGGGAACTCCAGAGGAAAGTGAGGCAATTCCATCAATCCACAGAAACATTCTGGCTTCAT
rJMSF028B12+          TGGGAACTCCAGAGGAAAGTGAGGCAATTCCATCAATCCACAGAAACATTCTGGCTTCAT
                      ____________________________________________________________
consensus             TGGGAACTCCAGAGGAAAGTGAGGCAATTCCATCAATCCACAGAAACATTCTGGCTTCAT
 
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rJMFF017H12+          AATAGAACAATAGTGAACAGAGATTTGGTGGAATTCAAAAAATGGAAACCACCCATGCCT
rJMSF028B12+          AATAGAACAATAGTGAACAGAGATTTGGTGGAATTCAAAAAATGGAAACCACCCATGCCT
                      ____________________________________________________________
consensus             AATAGAACAATAGTGAACAGAGATTTGGTGGAATTCAAAAAATGGAAACCACCCATGCCT
 
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rJMFF017H12+          CTACCTTGAGATTATGTTATTGAAACAGTTCTTGTAACCTACTCTTTACTGCAATGTTTG
rJMSF028B12+          CTACCNTGAGATTATGTTATTGAAACAGTTCTTGTAACCTACTCTTTACTGCAATGTTTG
                      ____________________________________________________________
consensus             CTACCTTGAGATTATGTTATTGAAACAGTTCTTGTAACCTACTCTTTACTGCAATGTTTG
 
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rJMFF017H12+          TGCTTCTATTTTTTCTGTTATAGTAAATACTGTAAATTTTTT                  
rJMSF028B12+          TGCTTCTATTTTTTCTGTTATAGTAAATACTGTAAATTTTTTTCCTNGTATAATTTCCAT
                      ____________________________________________________________
consensus             TGCTTCTATTTTTTCTGTTATAGTAAATACTGTAAATTTTTTTCCTNGTATAATTTCCAT