Contig 002881:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF032E12+                                                                     AA
                      ____________________________________________________________
consensus                                                                       AA
 
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JMFF032E12+           TAAGCCCAGAAAAATGGTGGCACTCAAAATGGTTGTGGCTCAAAGAATTACAAATATGGC
                      ____________________________________________________________
consensus             TAAGCCCAGAAAAATGGTGGCACTCAAAATGGTTGTGGCTCAAAGAATTACAAATATGGC
 
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JMFF032E12+           CGTGAAATTGGTTGAACNTAAACTTGGGCAGACATAAACTAGTATCGAACAATATCCTGG
JMFF040D09+                                                      ATCGAACAATATCCTGG
rJMSF027O20-                                                     ATCGAACAATATCCTGG
                      ____________________________________________________________
consensus             CGTGAAATTGGTTGAACNTAAACTTGGGCAGACATAAACTAGTATCGAACAATATCCTGG
 
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JMFF032E12+           AAGCAATCATAGAAATGTGAAATATTGATCTTTTCTTTTCCGGAGAAAATGGCTTCTGCT
JMFF040D09+           AAGCAATCATAGAAATGTGAAATATTGATCTTTTCTTTTCCGGAGAAAATGGCTTCTGCT
rJMSF027O20-          AAGCAATCATAGAAATGTGAAATATTGATCTTTTCTTTTCCGGAGAAAATGGCTTCTGCT
                      ____________________________________________________________
consensus             AAGCAATCATAGAAATGTGAAATATTGATCTTTTCTTTTCCGGAGAAAATGGCTTCTGCT
 
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JMFF032E12+           CTCCCACCGTGCTGGCCCTGAGCAGCCATTTCAATGACCATGTAGAGTTTCTTGATTGGC
JMFF040D09+           CTCCCACCGTGCTGGCCCTGAGCAGCCATTTCAATGACCATGTAGAGTTTCTTGATTGGC
rJMSF027O20-          CTCCCACCGTGCTGGCCCTGAGCAGCCATTTCAATGACCATGTAGAGTTTCTTGATTGGC
                      ____________________________________________________________
consensus             CTCCCACCGTGCTGGCCCTGAGCAGCCATTTCAATGACCATGTAGAGTTTCTTGATTGGC
 
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JMFF032E12+           GTATCATTTAATGCATCAGCAACAGAATCAACATCCTCCCTTGAGAACACATTAAGTTGC
JMFF040D09+           GTATCATTTAATGCATCAGCAACAGAATCAACATCCTCCCTTGAGAACACATTAAGTTGC
rJMSF027O20-          GTATCATTTAATGCATCAGCAACAGAATCAACATCCTCCCTTGAGAACACATTAAGTTGC
                      ____________________________________________________________
consensus             GTATCATTTAATGCATCAGCAACAGAATCAACATCCTCCCTTGAGAACACATTAAGTTGC
 
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JMFF032E12+           TCTAACACCTTCTTAGCATCCTCTGTCTTTAATGTTGGGACATGATGTGTGACTGAGAAC
JMFF040D09+           TCTAACACCTTCTTAGCATCCTCTGTCTTTAATGTTGGGACATGATGTGTGACTGAGAAC
rJMSF027O20-          TCTAACACCTTCTTAGCATCCTCTGTCTTTAATGTTGGGACATGATGTGTGACTGAGAAC
                      ____________________________________________________________
consensus             TCTAACACCTTCTTAGCATCCTCTGTCTTTAATGTTGGGACATGATGTGTGACTGAGAAC
 
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JMFF032E12+           GCATCACGAACACCAACTGACTCCAAGAAACCAACCTCACTGGTAGTTCCAATCACAAGA
JMFF040D09+           GCATCACGAACACCAACTGACTCCAAGAAACCAACCTCACTGGTAGTTCCAATCACAAGA
rJMSF027O20-          GCATCACGAACACCAACTGACTCCAAGAAACCAACCTCACTGGTAGTTCCAATCACAAGA
                      ____________________________________________________________
consensus             GCATCACGAACACCAACTGACTCCAAGAAACCAACCTCACTGGTAGTTCCAATCACAAGA
 
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JMFF032E12+           ATTTTTTTACCCTTTGGAGGAAGCCGCTTGAGGAGCACCAACAATGTCTGGGATATCAAA
JMFF040D09+           ATTTTTTTACCCTTTGGAGGAAGCCGCTTGAGGAGCACCAACAATGTCTGGGATATCAAA
rJMSF027O20-          ATTTTTTTACCCTTTGGAGGAAGCCGCTTGAGGAGCACCAACAATGTCTGGGATATCAAA
                      ____________________________________________________________
consensus             ATTTTTTTACCCTTTGGAGGAAGCCGCTTGAGGAGCACCAACAATGTCTGGGATATCAAA
 
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JMFF032E12+           TTTGAAAATCGAGGGCCAATGGCAACATACTCAAGTAGCCTTTCAATGTCATCAAGGATG
JMFF040D09+           TTTGAAAATCGAGGGCCAATGGCAACATACTCAAGTAGCCTTTCAATGTCATCAAGGATG
rJMSF027O20-          TTTGAAAATCGAGGGCCAATGGCAACATACTCAAGTAGCCTTTCAATGTCATCAAGGATG
                      ____________________________________________________________
consensus             TTTGAAAATCGAGGGCCAATGGCAACATACTCAAGTAGCCTTTCAATGTCATCAAGGATG
 
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JMFF032E12+           ATTATGCTTAGTGGCGATCTGTAAGCATCCTCAAAAACCTTGA                 
JMFF040D09+           ATTATGCTTAGTGGCGATCTGTAAGCATCCTCAAAAACCTTGA                 
rJMSF027O20-          ATTATGCTTAGTGGCGATCTGTAAGCATCCTCAAAAACCTTGACAATTTGAGCACATTTA
                      ____________________________________________________________
consensus             ATTATGCTTAGTGGCGATCTGTAAGCATCCTCAAAAACCTTGACAATTTGAGCACATTTA
 
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rJMSF027O20-          CTACCCTCACTTAATCCAATCATTGTCTCTGCAGAGATTATCTTTACATATGGAAAATCA
                      ____________________________________________________________
consensus             CTACCCTCACTTAATCCAATCATTGTCTCTGCAGAGATTATCTTTACATATGGAAAATCA
 
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rJMSF027O20-          CTTTCAATACCGACTGTTGCTGCCATTGCAGTCTTACCACTGCCACTGGGGCCTTCTAGA
                      ____________________________________________________________
consensus             CTTTCAATACCGACTGTTGCTGCCATTGCAGTCTTACCACTGCCACTGGGGCCTTCTAGA