Contig 002879:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027L14Sequence541020006704002879 (2)ref|XP_010326300.1|3e-49PREDICTED: uncharacterized protein LOC101258693 isoform X2 [Solanum lycopersicu
JMSF052D07Sequence622020127ref|XP_004247091.1|6e-16PREDICTED: uncharacterized protein LOC101258693 isoform X1 [Solanum lycopersicu926002879 (2)ref|XP_009782935.1|2e-91PREDICTED: uncharacterized protein LOC104231616 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF052D07+          TTCCATTGCTACTTTTCAAGATGATATAATCATTTGTAATACAGTTGGTCAGGAGGTATT
                      ____________________________________________________________
consensus             TTCCATTGCTACTTTTCAAGATGATATAATCATTTGTAATACAGTTGGTCAGGAGGTATT
 
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rJMSF052D07+          AAAGTTCAATAGCAAATCTGGGACTTTATCACCCTTCCAGTTCTCAAATTTTAGCATCCT
                      ____________________________________________________________
consensus             AAAGTTCAATAGCAAATCTGGGACTTTATCACCCTTCCAGTTCTCAAATTTTAGCATCCT
 
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rJMSF052D07+          TGGCCTTCCTTATTGGTTCTCATTTCCTATGGAGCGAGTATATGCTACTAAAGATGCACT
                      ____________________________________________________________
consensus             TGGCCTTCCTTATTGGTTCTCATTTCCTATGGAGCGAGTATATGCTACTAAAGATGCACT
 
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rJMSF052D07+          ATCAGGACTTCATGTTGATCATGCTGAACTTTTTAACTTGCTGCCAGGTAAAGTTGACAT
                      ____________________________________________________________
consensus             ATCAGGACTTCATGTTGATCATGCTGAACTTTTTAACTTGCTGCCAGGTAAAGTTGACAT
 
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rJMSF052D07+          AAAATTGAGTATCGACATACCCAAGTCATTTGAGCTGGTGGAGCCCTTGAATGAAAGTTG
                      ____________________________________________________________
consensus             AAAATTGAGTATCGACATACCCAAGTCATTTGAGCTGGTGGAGCCCTTGAATGAAAGTTG
 
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rJMSF052D07+          CATATGGCGCCAAGTTAGAGGAGCAGCAACAGTAGTCTCTGAAGCAGAGAAAGTTTCCAC
rJMSF027L14+                    CAAGCTAGAGGTGCAGCAACAGTAGTTTCTGAAGCAGAGAGAATTTCTAC
                      ____________________________________________________________
consensus             CATATGGCGCCAAGTTAGAGGTGCAGCAACAGTAGTTTCTGAAGCAGAGAGAGTTTCTAC
 
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rJMSF052D07+          TTCTGAAAAGGTATGCGCTGCCCAACAATGGTACGATGAACTTGACCACCGAACCTTCTG
rJMSF027L14+          TTCTGAAAAGGTATGCGCTGCCCAACAATGGTACGATGAACTTGACCACCGTACTTTCTG
                      ____________________________________________________________
consensus             TTCTGAAAAGGTATGCGCTGCCCAACAATGGTACGATGAACTTGACCACCGTACTTTCTG
 
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rJMSF052D07+          GGAATCGGAATTGGAAGTAGAATCAAACAAAGAAGTACACAGCTCAACTGAATCGAGCGT
rJMSF027L14+          GGAATCGGAAT------TAGAATCAAACAAAGAAGTACACAGCTCAACTGAATCAAGCGT
                      ____________________________________________________________
consensus             GGAATCGGAATTGGAAGTAGAATCAAACAAAGAAGTACACAGCTCAACTGAATCGAGCGT
 
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rJMSF052D07+          AGAACTGCTTAGCTCAAGTCCTTCGGAAGTTGTGCCAGAAGGGAAAGTTCTCACTGATTG
rJMSF027L14+          AGAAGTGCTTAGCTCAAGTCCTTCAGAAGTTGTGCCGGAAGGGAAAGTTCTCATTGATTG
                      ____________________________________________________________
consensus             AGAAGTGCTTAGCTCAAGTCCTTCGGAAGTTGTGCCGGAAGGGAAAGTTCTCATTGATTG
 
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rJMSF052D07+          CTGCATCAACACCAGTCCTGGTACAAGTGAGGTCATTATCTCTGCTGCGCTGTATTTGAA
rJMSF027L14+          CTGCATCAACACCAGTCCTGGTACAAGTGAGGTCATTATTTCCGCTGCACTGTATTTGAA
                      ____________________________________________________________
consensus             CTGCATCAACACCAGTCCTGGTACAAGTGAGGTCATTATTTCTGCTGCGCTGTATTTGAA
 
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rJMSF052D07+          ACTGAGGAAGACTGCAGATTCCGGCATGGATAGTCGGGAGCAGAAGGCTGCCAAGATAGC
rJMSF027L14+          ACTGAGGAAGACTGCAGATACCAGAATGGATAGTCGGGAGCAGAAGGCTGCCAAGATAGC
                      ____________________________________________________________
consensus             ACTGAGGAAGACTGCAGATTCCGGCATGGATAGTCGGGAGCAGAAGGCTGCCAAGATAGC
 
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rJMSF052D07+          GGATAGTTTGGACCCCACTAGAAGGGTAAGCAAAGATTTGCTCGTTTCATATCTGTTGGC
rJMSF027L14+          GGATAGTTTGGACCCCACAAGAAGGGTAAGCAAAGATTTGCTTGTTTCATATCTGTTGGC
                      ____________________________________________________________
consensus             GGATAGTTTGGACCCCACTAGAAGGGTAAGCAAAGATTTGCTTGTTTCATATCTGTTGGC
 
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rJMSF052D07+          ATCAAAAAGAGATTTGGAAGGCCTCATTGTAACTCGACCTTTACAAGTGAGGCTCAAGTT
rJMSF027L14+          ATCAAAAAGAGATTTGGAAGGCATCATTGTTACTCGACCTTTACAAGTGAGGCTCAAGTT
                      ____________________________________________________________
consensus             ATCAAAAAGAGATTTGGAAGGCCTCATTGTTACTCGACCTTTACAAGTGAGGCTCAAGTT
 
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rJMSF052D07+          TGAGTGCCCAAACCACCCAACATCAGAAGATAATTCCAAAGAAATTATCATAACTGATTC
rJMSF027L14+          TGAGTGCCCAAACCACCCAACATCAGAAGATAATTCCAAAGAAATTATCATAACTGATTC
                      ____________________________________________________________
consensus             TGAGTGCCCAAACCACCCAACATCAGAAGATAATTCCAAAGAAATTATCATAACTGATTC
 
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rJMSF052D07+          TTCTATAGATGTTAGTGTTTCTCTTTTGAACCCATAGTTTCTTACAG             
rJMSF027L14+          TTCTTTAAATGTTAGTGTTTCTCTTTTGAACCCATAGTTTCTTACAGACAAGTATTTACT
                      ____________________________________________________________
consensus             TTCTTTAGATGTTAGTGTTTCTCTTTTGAACCCATAGTTTCTTACAGACAAGTATTTACT
 
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rJMSF027L14+          TTTAGCATCCTTTGTATTCTTATATTTTTGTAAAAATTTTGGTTTATTGGGGGTAGTGTA
                      ____________________________________________________________
consensus             TTTAGCATCCTTTGTATTCTTATATTTTTGTAAAAATTTTGGTTTATTGGGGGTAGTGTA
 
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rJMSF027L14+          CTTTGATGTAAACCAGATCTTACCTCTCATACTTCAAATTTGACTGGTGCAAGACGTTTT
                      ____________________________________________________________
consensus             CTTTGATGTAAACCAGATCTTACCTCTCATACTTCAAATTTGACTGGTGCAAGACGTTTT