Contig 002877:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP010E10Sequence614002877 (3)ref|XP_011101573.1|3e-34PREDICTED: tubby-like F-box protein 8 [Sesamum indicum]
JMSF027F14Sequence654006553 (2)ref|XP_009416896.1|2e-60PREDICTED: tubby-like F-box protein 8 [Musa acuminata subsp. malaccensis] ref|X774002877 (3)gb|KDP30771.1|2e-87hypothetical protein JCGZ_15200 [Jatropha curcas]
JMSF040L01Sequence654006553 (2)ref|XP_009416896.1|7e-60PREDICTED: tubby-like F-box protein 8 [Musa acuminata subsp. malaccensis] ref|X923002877 (3)emb|CAN82256.1|3e-106hypothetical protein VITISV_009404 [Vitis vinifera]

Alignment

This contig is upended


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JMCP010E10+                           GTTAATTTGTTACTTCCTCATTGCATTACTGCGAGTTTCCTAGT
                      ____________________________________________________________
consensus                             GTTAATTTGTTACTTCCTCATTGCATTACTGCGAGTTTCCTAGT
 
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JMCP010E10+           GACTGATGTTAATTTGTTACTTTCACAGCCTTGCTGGTAGAAAATGGAAAGTTTCTTCTT
                      ____________________________________________________________
consensus             GACTGATGTTAATTTGTTACTTTCACAGCCTTGCTGGTAGAAAATGGAAAGTTTCTTCTT
 
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JMCP010E10+           TCTGCTAAGCGGAACCGGAGGACTACTCATACAGAATATATTATCTCGATGAACGCAGAT
                      ____________________________________________________________
consensus             TCTGCTAAGCGGAACCGGAGGACTACTCATACAGAATATATTATCTCGATGAACGCAGAT
 
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JMCP010E10+           AACATATCGCGGTCCAGTAACACTTATATTGGAAAACTAAGGTCAGTTTGCCTTGGAACT
                      ____________________________________________________________
consensus             AACATATCGCGGTCCAGTAACACTTATATTGGAAAACTAAGGTCAGTTTGCCTTGGAACT
 
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JMCP010E10+           TATATCCCACCTCGATATATACTTTGATTTTGATATTTTATTTTGACATGATAGAAAATT
                      ____________________________________________________________
consensus             TATATCCCACCTCGATATATACTTTGATTTTGATATTTTATTTTGACATGATAGAAAATT
 
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JMCP010E10+           ATTTGGTTTTGAATTTAATAGATGTTTGTTGTGGAGTATCAATTTACTTGAAGGTATTAA
                      ____________________________________________________________
consensus             ATTTGGTTTTGAATTTAATAGATGTTTGTTGTGGAGTATCAATTTACTTGAAGGTATTAA
 
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JMCP010E10+           TCATAGTTTATTTTCACATAGGACGTTATAACCTTTTTTAATGTGTTTCAGGTCAAATTT
                      ____________________________________________________________
consensus             TCATAGTTTATTTTCACATAGGACGTTATAACCTTTTTTAATGTGTTTCAGGTCAAATTT
 
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JMCP010E10+           TCTTGGAACTAAGTTCATAATTTATGACACCCAGCCACCATACAACAGCACTCATATA-T
rJMSF040L01+                                               CCATACAACAGCACTCATATATT
                      ____________________________________________________________
consensus             TCTTGGAACTAAGTTCATAATTTATGACACCCAGCCACCATACAACAGCACTCATATATT
 
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JMCP010E10+           CCGATCCTGGTTGTACAAGCCGCAGATTCTACCCAAAGAAAGTTT--CCCCCAAAGTCCC
rJMSF040L01+          CCGATCCTGGTTGTACAAGCCGCAGATTCTACCCAAAGAAAGTTTTCCCCCAAAAGTCCC
                      ____________________________________________________________
consensus             CCGATCCTGGTTGTACAAGCCGCAGATTCTACCCAAAGAAAGTTTTCCCCCCAAAGTCCC
 
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JMCP010E10+           TACTGGAAGCTACAA-CATTGCACAAGTCACATATGAACTGAATGTTCTTGGCACCAGAG
rJMSF040L01+          TACTGGAAGCTACAANCATTGCACAAGTCACATATGAACTGAATGTTCTTGGCACCAGAG
                      ____________________________________________________________
consensus             TACTGGAAGCTACAANCATTGCACAAGTCACATATGAACTGAATGTTCTTGGCACCAGAG
 
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JMCP010E10+           GGCCACGGAAAATGCATTGTGCCATGTATTCAAT                          
rJMSF040L01+          GGCCACGGAAAATGCATTGTGCCATGTATTCAATCCCGGCCTCGTCTCTTGAGCCTGGCG
rJMSF027F14+                GGAAAATGCATTGTGCCATGTATTCAATCCCGGCCTCGTCTCTTGAGCCTGGCG
                      ____________________________________________________________
consensus             GGCCACGGAAAATGCATTGTGCCATGTATTCAATCCCGGCCTCGTCTCTTGAGCCTGGCG
 
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rJMSF040L01+          GCATTGTCCCTGGCCAGCCTGAGCTGCTTCCTCGCTCACTTGAGGATTCGTTCAGGAGCA
rJMSF027F14+          GCATTGTCCCTGGCCAGCCTGAGCTGCTTCCTCGCTCACTTGAGGATTCGTTCAGGAGCA
                      ____________________________________________________________
consensus             GCATTGTCCCTGGCCAGCCTGAGCTGCTTCCTCGCTCACTTGAGGATTCGTTCAGGAGCA
 
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rJMSF040L01+          TCTCCTTTTCAAAATCAATTGATAATTCAACCGAGTTCAGTAGTGCAAGGTATTCGGACA
rJMSF027F14+          TCTCCTTTTCAAAATCAATTGATAATTCAACCGAGTTCAGTAGTGCAAGGTATTCGGACA
                      ____________________________________________________________
consensus             TCTCCTTTTCAAAATCAATTGATAATTCAACCGAGTTCAGTAGTGCAAGGTATTCGGACA
 
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rJMSF040L01+          TAATCGGTCCACGGGATGGTGATGATGATGATGATGATGCGAAGGAAAGACCTTTAGTAC
rJMSF027F14+          TAATCGGTCCACGGGATGGTGATGATGATGATGATGATGCGAAGGAAAGACCTTTAGTAC
                      ____________________________________________________________
consensus             TAATCGGTCCACGGGATGGTGATGATGATGATGATGATGCGAAGGAAAGACCTTTAGTAC
 
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rJMSF040L01+          TTCGGAATAAACCTCCGAGATGGCACGAGCAGTTGCAGTGTTGGTGTCTTAATTTCAGGG
rJMSF027F14+          TTCGGAATAAACCTCCGAGATGGCACGAGCAGTTGCAGTGTTGGTGTCTTAATTTCAGGG
                      ____________________________________________________________
consensus             TTCGGAATAAACCTCCGAGATGGCACGAGCAGTTGCAGTGTTGGTGTCTTAATTTCAGGG
 
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rJMSF040L01+          GAAGGGTAACGGTTGCCTCTGTCAAGAATTTCCAGCTGATCGCAGCAACGCAGCCGCCGC
rJMSF027F14+          GAAGGGTAACGGTTGCCTCTGTCAAGAATTTCCAGCTGATCGCAGCAACGCAGCCGCCGC
                      ____________________________________________________________
consensus             GAAGGGTAACGGTTGCCTCTGTCAAGAATTTCCAGCTGATCGCAGCAACGCAGCCGCCGC
 
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rJMSF040L01+          CTGCTGGTGCCCCAACGCCAGCTCAGCCGCCACCCCAGTCTGATCCCGACAAGATCATCC
rJMSF027F14+          CTGCTGGTGCCCCAACGCCAGCTCAGCCGCCACCCCAGTCTGATCCCGACAAGATCATCC
                      ____________________________________________________________
consensus             CTGCTGGTGCCCCAACGCCAGCTCAGCCGCCACCCCAGTCTGATCCCGACAAGATCATCC
 
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rJMSF040L01+          TGCAGTTCGGGAAGGTTGGCAAAGATATGTTCACCATGGATTACCGATATCCTTTGTCCG
rJMSF027F14+          TGCAGTTCGGGAAGGTTGGCAAAGATATGTTCACCATGGATTACCGATATCCTTTGTCCG
                      ____________________________________________________________
consensus             TGCAGTTCGGGAAGGTTGGCAAAGATATGTTCACCATGGATTACCGATATCCTTTGTCCG
 
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rJMSF040L01+          CCTTTCAGGCATTCGCCATCTGTTTAAGCAGCTTTGACACAAAGCTCGCATGTGAATAAT
rJMSF027F14+          CCTTTCAGGCATTCGCCATCTGTTTAAGCAGCTTTGACACAAAGCTCGCATGTGAATAAT
                      ____________________________________________________________
consensus             CCTTTCAGGCATTCGCCATCTGTTTAAGCAGCTTTGACACAAAGCTCGCATGTGAATAAT
 
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rJMSF040L01+          ACTACATAAACCGAAGGTTGTGCGCCTATACTGACCAACATTTGCAAGCGACGAGTCTGT
rJMSF027F14+          ACTACATAAACCGAAGGTTGTGCGCCTATACTGACCAACATTTGCAAGCGACGAGTCTGT
                      ____________________________________________________________
consensus             ACTACATAAACCGAAGGTTGTGCGCCTATACTGACCAACATTTGCAAGCGACGAGTCTGT
 
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rJMSF040L01+          CTGTGCAACTCCACTGTACTGTATGTCCAAGAAAAAGGTGCAGGAATGTTAATTCCTTCC
rJMSF027F14+          CTGTGCAACTCCACTGTACTGTATGTCCAAGAAAAAGGTGCAGGAATGTTAATTCCTTCC
                      ____________________________________________________________
consensus             CTGTGCAACTCCACTGTACTGTATGTCCAAGAAAAAGGTGCAGGAATGTTAATTCCTTCC
 
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rJMSF040L01+          ATTGTACTTTTCCTTATTCTCTTTTGTTTCTTCCATGTTAATTCCTTCCTGTCTTAGGTA
rJMSF027F14+          ATTGTACTTTTCCTTATTCTCTTTTGTTTCTTCCATGTTAATTCCTTCCTGTCTTAGGTA
                      ____________________________________________________________
consensus             ATTGTACTTTTCCTTATTCTCTTTTGTTTCTTCCATGTTAATTCCTTCCTGTCTTAGGTA
 
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rJMSF040L01+          AATTTGTTTTGGTAGTTTAATTTGCTGTAAACCTTATTGCATGAACCCATAACCAGGAAT
rJMSF027F14+          AATTTGTTTTGGTAGTTTAATTTGCTGTAAACCTTATTGCATGAACCCATAACCAGGAAT
                      ____________________________________________________________
consensus             AATTTGTTTTGGTAGTTTAATTTGCTGTAAACCTTATTGCATGAACCCATAACCAGGAAT