| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN037D15 | Sequence | 534 | 002874 (4) | ref|XP_011080069.1| | 5e-25 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | |||||
| JMSF009G23 | Sequence | 302 | 010420 (7) | ref|XP_009764729.1| | 3e-29 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 717 | 002874 (4) | ref|XP_004240128.1| | 4e-21 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
| JMSF027B16 | Sequence | 665 | 010420 (7) | ref|XP_009764729.1| | 2e-85 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 761 | 002874 (4) | ref|XP_006359730.1| | 2e-26 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
| JMSF042N21 | Sequence | 788 | 010420 (7) | ref|XP_009764729.1| | 9e-119 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 648 | 002874 (4) | ref|XP_011080069.1| | 5e-28 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
This contig is upended
. : . : . : . : . : . :
rJMSF042N21+ TGGGCTATGTTGAATTAGATCTGCCAGATCCT
rJMSF009G23+ GGAAAACTCTCTCTTGAAATCCCTGGGCTATGTTGAATTAGATCTGCCAGATCCT
rJMSF027B16+ TGGGATATGGTGAATTAGATCTGCCAGATCCT
____________________________________________________________
consensus GGAAAACTCTCTCTTGAAATCCCTGGGCTATGTTGAATTAGATCTGCCAGATCCT
. : . : . : . : . : . :
rJMSF042N21+ CCTGAGAAGGCAGCCCGTCCTCCTCCACAGCCCATTGACCCTTCCTCAAGATTTGGTCCC
rJMSF009G23+ CCTGAGAAGGCAGCCCGTCCTCCTCCACAGCCCATTGACCCTTCCTCAAGATTTGGTCCC
JMFN037D15- AGATTTGGTCCC
rJMSF027B16+ CCTGAGAAGGCAGCCCGTCCTCCTCCACAGCCCATTGACCCTTCCTCAAGATTTGGTCCC
____________________________________________________________
consensus CCTGAGAAGGCAGCCCGTCCTCCTCCACAGCCCATTGACCCTTCCTCAAGATTTGGTCCC
. : . : . : . : . : . :
rJMSF042N21+ AAGGCAGAAATAGCTCACATATTCAGGGCTCCAGAGAAACAGCCTCCTAGAGAGCTTTCC
rJMSF009G23+ AAGGCAGAAATAGCTC-CATATTCAGGGCTCCAGAGAAACAGCCTCCTAGAGAGCTTTCC
JMFN037D15- AAGGCAGAAATAGCTCACATATTCAGGGCTCCAGAGAAACAGCCTCCTAGAGAGCTTTCC
rJMSF027B16+ AAGGCAGAAATAGCTCACATATTCAGGGCTCCAGAGAAACAGCCTCCTAGAGAGCTTTCC
____________________________________________________________
consensus AAGGCAGAAATAGCTCACATATTCAGGGCTCCAGAGAAACAGCCTCCTAGAGAGCTTTCC
. : . : . : . : . : . :
rJMSF042N21+ CTTGCATTTCTGGCGCTTGTTCTCTTGCCCTTCTTTGGATTTTTGGTTGGGCTTTTATTG
rJMSF009G23+ CTTGCATTTCTGGCGCTTGTTCTCTTGCCCTTCTTTGGATTTTTGGTTGGGCTTTTATTG
JMFN037D15- CTTGCATTTCTGGCGCTTGTTCTCTTGCCCTTCTTTGGATTTTTGGTTGGGCTTTTACGG
rJMSF027B16+ CTTGCATTTCTGGCGCTTGTTCTCTTGCCCTTCTTTGGATTTTTGGTTGGGCTTTTACGG
____________________________________________________________
consensus CTTGCATTTCTGGCGCTTGTTCTCTTGCCCTTCTTTGGATTTTTGGTTGGGCTTTTACGG
. : . : . : . : . : . :
rJMSF042N21+ TTGCGGGTGAACCTGAAGAACTTCCCACATGTCCCAGTGCCTGCTACATTTGCCAGTCTT
rJMSF009G23+ TTGCGGGTGAACCTGAAGAACTTCCCACATGTCCCAGTGCCTGCTACATTTGCCAGTCTT
JMFN037D15- TTGCGGGTGAACCTGAAGAACTTCCCACATGCCCCAGTGCCTGCTACATTTGCCAGTCTT
rJMSF027B16+ TTGCGGGTGAACCTGAAGAACTTCCCACATGCCCCAGTGCCTGCTACATTTGCCAGTCTT
____________________________________________________________
consensus TTGCGGGTGAACCTGAAGAACTTCCCACATGCCCCAGTGCCTGCTACATTTGCCAGTCTT
. : . : . : . : . : . :
rJMSF042N21+ TTCCACGTTGGCCTCGCAGCTGTCCTCTTACTCTATCTTCTCTTCTGGCTGAAGTTGAAT
rJMSF009G23+ TTCCACGTTGGCCTCGCAGCTGTCCTCTTACTCTATCTTCTCTTCTGGCTGAAGTTGAAT
JMFN037D15- TTCCACGTTGGCCTCGCAGCTGTCCTCTTACTCTATCTTCTCTTCTGGCTGAAGTTGAAT
rJMSF027B16+ TTCCACGTTGGCCTCGCAGCTGTCCTCTTACTCTATCTTCTCTTCTGGCTGAAGTTGAAT
____________________________________________________________
consensus TTCCACGTTGGCCTCGCAGCTGTCCTCTTACTCTATCTTCTCTTCTGGCTGAAGTTGAAT
. : . : . : . : . : . :
rJMSF042N21+ CTGTTCACCACATTAAAAGCTCTTGGAATCTTGGGAATGTTTTTGATGTTTGTTGGACAC
rJMSF009G23+ CTGTTCACCACATTAAAAGCTCTTGGAATCTTGGGAATGTTTTTGATGTTTGTTGGACAC
JMFN037D15- TTGTTCACCACATTGAAAGCTCTTGGAATCTTGGGAATGTTTTTGATGTTTGTTGGACAC
rJMSF027B16+ TTGTTCACCACATTGAAAGCTCTTGGAATCTTGGGAATGTTTTTGATGTTTGTTGGACAC
____________________________________________________________
consensus TTGTTCACCACATTGAAAGCTCTTGGAATCTTGGGAATGTTTTTGATGTTTGTTGGACAC
. : . : . : . : . : . :
rJMSF042N21+ AGAACCCTCTCACACTTGGCTTCAACATCAGCCAAGGTGAAATCTGCATGACCTGC
rJMSF009G23+ AGAACCCTCTCACACTTGGCTTCAACATCAGCCAAGGTGAAATCTGCATGACCTGC
JMFN037D15- AGAACCCTCTCACACTTGGCTTCAACATCAGCCAAGGTGAAATCCGCGTGACCTGC
rJMSF027B16+ AGAACCCTCTCACACTTGGCTTCAACATCAGCCAAGGTGAAATCCGCGTGACCTGCGGGA
____________________________________________________________
consensus AGAACCCTCTCACACTTGGCTTCAACATCAGCCAAGGTGAAATCCGCGTGACCTGCGGGA
. : . : . : . : . : . :
rJMSF027B16+ TAATCCGTTTACAAATGACCTAGAAAAGCATGGAAGAAACAGAGTCTATTATTGAGTCAG
____________________________________________________________
consensus TAATCCGTTTACAAATGACCTAGAAAAGCATGGAAGAAACAGAGTCTATTATTGAGTCAG
. : . : . : . : . : . :
rJMSF027B16+ TTTTGTAGGCTATGGCCACCAAATCATGTATTTATGACTTATGAGGATAGAATTTTTCCC
____________________________________________________________
consensus TTTTGTAGGCTATGGCCACCAAATCATGTATTTATGACTTATGAGGATAGAATTTTTCCC
. : . : . : . : . : . :
rJMSF027B16+ ACCATCATATTGAAAACACTTCAGTTTAGTGCATCAGAAATTCAGGATTATATCTTCTTC
____________________________________________________________
consensus ACCATCATATTGAAAACACTTCAGTTTAGTGCATCAGAAATTCAGGATTATATCTTCTTC
. : . : . : . : . : . :
rJMSF027B16+ TTCTTTTAAGTGGTGTAGTTGTTTTAATGCCTGAGATGTTTAATTTTGAATCAACTTTTA
____________________________________________________________
consensus TTCTTTTAAGTGGTGTAGTTGTTTTAATGCCTGAGATGTTTAATTTTGAATCAACTTTTA
. : . : . : . : . : . :
rJMSF027B16+ TGTTCAATATGTGTCTGCCTAGTACTCCATCTAACTGCTCCTTAGTGTGTGAAGTTAGAC
____________________________________________________________
consensus TGTTCAATATGTGTCTGCCTAGTACTCCATCTAACTGCTCCTTAGTGTGTGAAGTTAGAC