Contig 002873:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039I19Sequence327002873 (2)
JMSF027B03Sequence642023204ref|XP_010252589.1|137PREDICTED: uncharacterized protein LOC104594128 [Nelumbo nucifera]281002873 (2)

Alignment

This contig is upended


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rJMFF039I19+                                      CCGGCGAGGGAGANGAGGAGGGAGGTGAAAAA
                      ____________________________________________________________
consensus                                         CCGGCGAGGGAGANGAGGAGGGAGGTGAAAAA
 
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rJMFF039I19+          GGGTCNGNGAGGAGGNTTGNGANTTTTTTTGGAGAGAAGATTTGGANNGTTTGGANNTGA
                      ____________________________________________________________
consensus             GGGTCNGNGAGGAGGNTTGNGANTTTTTTTGGAGAGAAGATTTGGANNGTTTGGANNTGA
 
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rJMFF039I19+          AAATTTTGTTGGGAAAAAAAAAAAGGTTGTTAAGAAGGGAATGAAAAAGCTAAGGTTGGT
rJMSF027B03+                       AAAAAAAAAAAGGTTGTTAAGAAGGGAATGAAAAAGCTAAGGTTGGT
                      ____________________________________________________________
consensus             AAATTTTGTTGGGAAAAAAAAAAAGGTTGTTAAGAAGGGAATGAAAAAGCTAAGGTTGGT
 
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rJMFF039I19+          TAACACCTTCACTACTTCTTCTATCTTCTCCTCTCTTTATCTTTTGTATTTCTCTGCTGC
rJMSF027B03+          TAACACCTTCACTACTTCTTCTATCTTCTCCTCTCTTTATCTTTTGTATTTCTCTGCTGC
                      ____________________________________________________________
consensus             TAACACCTTCACTACTTCTTCTATCTTCTCCTCTCTTTATCTTTTGTATTTCTCTGCTGC
 
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rJMFF039I19+          AAAATCTGTAAAGTACCCTCTCCCTTCCCAGTGTAAAATATGGCTGGTTTTGAATGAACA
rJMSF027B03+          AAAATCTGTAAAGTACCCTCTCCCTTCCCAGTGTAAAATATGGCTGGTTTTGAATGAACA
                      ____________________________________________________________
consensus             AAAATCTGTAAAGTACCCTCTCCCTTCCCAGTGTAAAATATGGCTGGTTTTGAATGAACA
 
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rJMFF039I19+          CCTGAGATTGTTGTTCATACCTTCAACCCCTGTTTGATTGCAGAAGCAAAAGAAA     
rJMSF027B03+          CCTGAGATTGTTGTTCATACCTTCAACCCCTGTTTGATTGCAGAAGCAAAAGAAATAATT
                      ____________________________________________________________
consensus             CCTGAGATTGTTGTTCATACCTTCAACCCCTGTTTGATTGCAGAAGCAAAAGAAATAATT