| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF009M10 | Sequence | 314 | 002284 (5) | ref|XP_010931718.1| | 1e-20 | PREDICTED: subtilisin-like protease SBT3.5 [Elaeis guineensis] | 810 | 002872 (4) | ref|XP_007039329.1| | 2e-79 | Subtilase family protein [Theobroma cacao] gb|EOY23830.1| Subtilase family prote |
| JMSF026P09 | Sequence | 657 | 002284 (5) | ref|XP_011075896.1| | 5e-75 | PREDICTED: subtilisin-like protease SBT3.5 [Sesamum indicum] | 773 | 002872 (4) | ref|XP_007039329.1| | 1e-74 | Subtilase family protein [Theobroma cacao] gb|EOY23830.1| Subtilase family prote |
| JMSF027O23 | Sequence | 592 | 002284 (5) | emb|CDY67954.1| | 1e-63 | BnaAnng25710D [Brassica napus] | 699 | 002872 (4) | ref|XP_007039329.1| | 8e-61 | Subtilase family protein [Theobroma cacao] gb|EOY23830.1| Subtilase family prote |
| JMSF028K24 | Sequence | 676 | 002284 (5) | ref|XP_011075896.1| | 9e-61 | PREDICTED: subtilisin-like protease SBT3.5 [Sesamum indicum] | 698 | 002872 (4) | ref|XP_007039329.1| | 2e-63 | Subtilase family protein [Theobroma cacao] gb|EOY23830.1| Subtilase family prote |
This contig is upended
. : . : . : . : . : . :
rJMSF009M10+ CCNG
____________________________________________________________
consensus CCNG
. : . : . : . : . : . :
rJMSF009M10+ GAACAAATATTTTAGCAGCATATGTTCCTGAAAATCCTAATATACGAATAAGTACATATA
____________________________________________________________
consensus GAACAAATATTTTAGCAGCATATGTTCCTGAAAATCCTAATATACGAATAAGTACATATA
. : . : . : . : . : . :
rJMSF009M10+ AGATTATCAGTGGAACATCTATGGCAACACCACATGTGGCAGGAATAGTTGCACTACTCA
rJMSF026P09+ ACATCTATGGCAACACCACATGTGGCAGGAATAGGTGCACTACTCA
____________________________________________________________
consensus AGATTATCAGTGGAACATCTATGGCAACACCACATGTGGCAGGAATAGTTGCACTACTCA
. : . : . : . : . : . :
rJMSF009M10+ AAGCTGCTAACCCAAATTGGTCTCCGGCAGCTATAAAATCCGCAATTGTCACAACAGCAT
rJMSF028K24+ AAATCCGCAATTGTCACAACAGCAT
rJMSF027O23+ AAATCCGCAATTGTCACCACAGCAT
rJMSF026P09+ AAGCTGCTAACCCAAATTGGTCTCCGGCAGCTATAAAATCCGCAATTGTCACAACAGCAT
____________________________________________________________
consensus AAGCTGCTAACCCAAATTGGTCTCCGGCAGCTATAAAATCCGCAATTGTCACAACAGCAT
. : . : . : . : . : . :
rJMSF009M10+ GGACAAGTGACCCATCATCTGGACAACCTATATTCAATGAAGGAGAGACAATCAGTAAAT
rJMSF028K24+ GGACAAGTGACCCATCATCTGGACAACCTATATTCAATGAAGGAGAGACAATCAGTAAAT
rJMSF027O23+ GGACAAGTGACCCATCATCTGGACAACCTATATTCAATGAAGGAGAGACAATCAGTAAAT
rJMSF026P09+ GGACAAGTGACCCATCATCTGGACAACCTATATTCAATGAAGGAGAGACAATCAGTAAAT
____________________________________________________________
consensus GGACAAGTGACCCATCATCTGGACAACCTATATTCAATGAAGGAGAGACAATCAGTAAAT
. : . : . : . : . : . :
rJMSF009M10+ TGGCAGATGCATTTGACCATGGGGGAGGGATCATAAACCCCAACAAAGCAAGATCTCCCG
rJMSF028K24+ TGGCAGATGCATTTGACCATGGGGGAGGGATCATAAACCCCAACAAAGCAAGATCTCCCG
rJMSF027O23+ TGGCAGATGCATTTGACCATGGGGGAGGGATCATAAACCCCAACAAAGCAAGATCTCCCG
rJMSF026P09+ TGGCAGATGCATTTGACCATGGGGGAGGGATCATAAACCCCAACAAAGCAAGATCTCCCG
____________________________________________________________
consensus TGGCAGATGCATTTGACCATGGGGGAGGGATCATAAACCCCAACAAAGCAAGATCTCCCG
. : . : . : . : . : . :
rJMSF009M10+ GCCTCATCTACGACATGAGCACAACAGATTATCTTCAGTGCCTATGTGCCATGGGATATG
rJMSF028K24+ GCCTCATCTACGACATGAGCACAACAGATTATCTTCAGTGCCTATGTGCCATGGGATATG
rJMSF027O23+ GCCTCATCTACGACATGAGCACAACAGATTATCTTCAGTGCCTATGTGCCATGGGATATG
rJMSF026P09+ GCCTCATCTACGACATGAGCACAACAGATTATCTTCAGTGCCTATGTGCCATGGGATATG
____________________________________________________________
consensus GCCTCATCTACGACATGAGCACAACAGATTATCTTCAGTGCCTATGTGCCATGGGATATG
. : . : . : . : . : . :
rJMSF009M10+ ACAGTAGGGTCATTAGTGGACTTGCAGGGCAAGCCACATCTTGCAATAATGGGCTTTCCA
rJMSF028K24+ ACAGTAGGGTCATTAGTGGACTTGCAGGGCAAGCCACATCTTGCAATAATGGGCTTTCCA
rJMSF027O23+ ACAGTAGGGTCATTAGTGGACTTGCAGGGCAAGCCACATCTTGCAATAATGGGCTTTCCA
rJMSF026P09+ ACAGTAGGGTCATTAGTGGACTTGCAGGGCAAGCCACATCTTGCAATAATGGGCTTCCCA
____________________________________________________________
consensus ACAGTAGGGTCATTAGTGGACTTGCAGGGCAAGCCACATCTTGCAATAATGGGCTTTCCA
. : . : . : . : . : . :
rJMSF009M10+ TTTTTGATGTGAATTTTCCTTCGATAACCATGCCAAATCTAAACGGAACAGTCACTCTCA
rJMSF028K24+ TTTTTGATGTGAATTTTCCTTCGATAACCATGCCAAATCTAAACGGAACAGTCACTCTCA
rJMSF027O23+ TTTTTGATGTGAATTTTCCTTCGATAACCATGCCAAATCTAAACGGAACAGTCACTCTCA
rJMSF026P09+ TTTTTGATGTGAATTTTCCTTCGATAACCATGCCAAATCTAAACGGAACAGTCACTCTCA
____________________________________________________________
consensus TTTTTGATGTGAATTTTCCTTCGATAACCATGCCAAATCTAAACGGAACAGTCACTCTCA
. : . : . : . : . : . :
rJMSF009M10+ CTAGAACTGTGACAAATGTTGGACCTGTAAACTCGGTATACAAAGTTATGGTTGAACCTC
rJMSF028K24+ CTAGAACTGTGACAAATGTTGGACCTGTAAACTCGGTATACAAAGTTATGGTTGAACCTC
rJMSF027O23+ CTAGAACTGTGACAAATGTTGGACCTGTAAACTCGGTATACAAAGTTATGGTTGAACCTC
rJMSF026P09+ CTAGAACTGTGACAAATGTTGGACCTGTAAACTCGGTATACAAAGTTATGGTTGAACCTC
____________________________________________________________
consensus CTAGAACTGTGACAAATGTTGGACCTGTAAACTCGGTATACAAAGTTATGGTTGAACCTC
. : . : . : . : . : . :
rJMSF009M10+ CAAAGGGAATAACAGTATCTGTAACACCAAGTACACTAAACTTTAATCCCAGCGTCAAGA
rJMSF028K24+ CAAAGGGAATAACAGTATCTGTAACACCAAGTACACTAAACTTTAATCCCAGCGTCAAGA
rJMSF027O23+ CAAAGGGAATAACAGTATCTGTAACACCAAGTACACTAAACTTTAATCCCAGCGTCAAGA
rJMSF026P09+ CAAAGGGAATAACAGTATCTGTAACACCAAGTACACTAAACTTTAATCCCAGCGTCAAGA
____________________________________________________________
consensus CAAAGGGAATAACAGTATCTGTAACACCAAGTACACTAAACTTTAATCCCAGCGTCAAGA
. : . : . : . : . : . :
rJMSF009M10+ AGATCTCCTTCAGTGTAAAAATTTCCACGAGCTATCTCTTCAACACGGGATACTATTTTG
rJMSF028K24+ AGATCTCCTTCAGTGTAAAAATTTCCACGAGCTATCTCTTCAACACGGGATACTATTTTG
rJMSF027O23+ AGATCTCCTTCAGTGTAAAAATTTCCACGAGCTATCTCTTCAACACGGGATACTATTTTG
rJMSF026P09+ AGATCTCCTTCAGTGTAAAAATTTCCACGAGCTATCTCTTCAACACGGGATACTATTTTG
____________________________________________________________
consensus AGATCTCCTTCAGTGTAAAAATTTCCACGAGCTATCTCTTCAACACGGGATACTATTTTG
. : . : . : . : . : . :
rJMSF009M10+ GGAGCTTAACTTGGAATGATGGGGTGAATAATGTCAGAATTCCTATATCTGTCAAGACAA
rJMSF028K24+ GGAGCTTAACTTGGAATGATGGGGTGAATAATGTCAGAATTCCTATATCTGTCAAGACAA
rJMSF027O23+ GGAGCTTAACTTGGAATGATGGGGTGAATAATGTCAGAATTCCTATATCTGTCAAGACAA
rJMSF026P09+ GGAGCTTAACTTGGAATGATGGGGTGAATAATGTCAGAATTCCTATATCTGTCAAGACAA
____________________________________________________________
consensus GGAGCTTAACTTGGAATGATGGGGTGAATAATGTCAGAATTCCTATATCTGTCAAGACAA
. : . : . : . : . : . :
rJMSF009M10+ TGTATTAAGTAAGAATCAAGATACTATTATGGGAGCTTGACTTAGAATGATATGGTGTAT
rJMSF028K24+ TGTATTAAGTAAGAATCAAGATACTATTATGGGAGCTTGACTTAGAATGATATGGTGTAT
rJMSF027O23+ TGTATTAAGTAAGAATCAAGATACTATTATGGGAGCTTGACTTAGAATGATATGGTGTAT
rJMSF026P09+ TGTATTAAGTAAGAATCAAGATACTATTATGGGAGCTTGACTTAGAATGATATGGTGTAT
____________________________________________________________
consensus TGTATTAAGTAAGAATCAAGATACTATTATGGGAGCTTGACTTAGAATGATATGGTGTAT
. : . : . : . : . : . :
rJMSF009M10+ AGTGTGAGAATTCC
rJMSF028K24+ AGTGTGAGAATTCCTATATATCTGATAACACTATGTATTAATAATCTGAATTGATGCTA
rJMSF027O23+ AGTGTGAGAATTCCTATATATCTGATAACACTATGTATTAATAATCTGAATTGATGCTA
rJMSF026P09+ AGTGTGAGAATTCCTATATATCTGATAACACTATGTATTAATAATCTGAATTGATGCTAT
____________________________________________________________
consensus AGTGTGAGAATTCCTATATATCTGATAACACTATGTATTAATAATCTGAATTGATGCTAT