Contig 002871:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012O15Sequence569002871 (4)ref|XP_008451417.1|2e-60PREDICTED: histone H2AX [Cucumis melo]584002871 (4)ref|XP_008451417.1|3e-60PREDICTED: histone H2AX [Cucumis melo]
JMSF026N04Sequence627002871 (4)ref|XP_008451417.1|5e-60PREDICTED: histone H2AX [Cucumis melo]579002871 (4)ref|XP_008451417.1|3e-60PREDICTED: histone H2AX [Cucumis melo]

Alignment

This contig is upended


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JMFF012O15+                                         CACTCAATAGCAGCAGCTAGNTAATATACA
                      ____________________________________________________________
consensus                                           CACTCAATAGCAGCAGCTAGNTAATATACA
 
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rJMFF012O15-                                        CCCTAAAACTCCTGAGAAGCAGAGCCAATT
JMFF012O15+           TAAAGTTCCATTTTCACCTCCACTAAAAAACCCTAAAACTCCTGAGAAGCAGAGCCAATT
rJMSF026N04-                                        CCCTAAAACTCCTGAGAAGCAGAGCCAATT
                      ____________________________________________________________
consensus             TAAAGTTCCATTTTCACCTCCACTAAAAAACCCTAAAACTCCTGAGAAGCAGAGCCAATT
 
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rJMFF012O15-          TCACCCTTTCCAGAGCCAGCCTTCTTTGGCAGCAAAGTTTGATGGATATTGGGCAAAACA
JMFF012O15+           TCACCCTTTCCAGAGCCAGCCTTCTTTGGCAGCAAAGTTTGATGGATATTGGGCAAAACA
JMSF026N04+                                                                    ACA
rJMSF026N04-          TCACCCTTTCCAGAGCCAGCCTTCTTTGGCAGCAAAGTTTGATGGATATTGGGCAAAACA
                      ____________________________________________________________
consensus             TCACCCTTTCCAGAGCCAGCCTTCTTTGGCAGCAAAGTTTGATGGATATTGGGCAAAACA
 
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rJMFF012O15-          CCCCCATTGGCAATAGTCACATCACCCAGAAGCTTGCTAAGCTCTTCATCATTCCTCACA
JMFF012O15+           CCCCCATTGGCAATAGTCACATCACCCAGAAGCTTGCTAAGCTCTTCATCATTCCTCACA
JMSF026N04+           CCCCCATTGGCAATAGTCACATCACCCAGAAGCTTGCTAAGCTCTTCATCATTCCTCACA
rJMSF026N04-          CCCCCATTGGCAATAGTCACATCACCCAGAAGCTTGCTAAGCTCTTCATCATTCCTCACA
                      ____________________________________________________________
consensus             CCCCCATTGGCAATAGTCACATCACCCAGAAGCTTGCTAAGCTCTTCATCATTCCTCACA
 
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rJMFF012O15-          GCCAATTGAATGTGCCTTGGCACTATGCGATTCTTCTTGTTGTCCCTTGCTGCATTCCCA
JMFF012O15+           GCCAATTGAATGTGCCTTGGCACTATGCGATTCTTCTTGTTGTCCCTTGCTGCATTCCCA
JMSF026N04+           GCCAATTGAATGTGCCTTGGCACTATGCGATTCTTCTTGTTGTCCCTTGCTGCATTCCCA
rJMSF026N04-          GCCAATTGAATGTGCCTTGGCACTATGCGATTCTTCTTGTTGTCCCTTGCTGCATTCCCA
                      ____________________________________________________________
consensus             GCCAATTGAATGTGCCTTGGCACTATGCGATTCTTCTTGTTGTCCCTTGCTGCATTCCCA
 
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rJMFF012O15-          GCCAATTCCAACACCTCAGCAGCGAGATATTCAAGAACAGCAGCGAGATAAACCGGAGCT
JMFF012O15+           GCCAATTCCAACACCTCAGCAGCGAGATATTCAAGAACAGCAGCGAGATAAACCGGAGCT
JMSF026N04+           GCCAATTCCAACACCTCAGCAGCGAGATATTCAAGAACAGCAGCGAGATAAACCGGAGCT
rJMSF026N04-          GCCAATTCCAACACCTCAGCAGCGAGATATTCAAGAACAGCAGCGAGATAAACCGGAGCT
                      ____________________________________________________________
consensus             GCCAATTCCAACACCTCAGCAGCGAGATATTCAAGAACAGCAGCGAGATAAACCGGAGCT
 
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rJMFF012O15-          CCACCACCAACACGCTCGGCGTACTTTCCAGCCTTGAGGAATCGCGCGATTCTGCCGACC
JMFF012O15+           CCACCACCAACACGCTCGGCGTACTTTCCAGCCTTGAGGAATCGCGCGATTCTGCCGACC
JMSF026N04+           CCACCACCAACACGCTCGGCGTACTTTCCAGCCTTGAGGAATCGCGCGATTCTGCCGACC
rJMSF026N04-          CCACCACCAACACGCTCGGCGTACTTTCCAGCCTTGAGGAATCGCGCGATTCTGCCGACC
                      ____________________________________________________________
consensus             CCACCACCAACACGCTCGGCGTACTTTCCAGCCTTGAGGAATCGCGCGATTCTGCCGACC
 
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rJMFF012O15-          GGGAACTGGAGCCCCGCCTTAGAAGATCGAGACACCGACTTCGTGGCTTTCGGCTTGCCT
JMFF012O15+           GGGAACTGGAGCCCCGCCTTAGAAGATCGAGACACCGACTTCGTGGCTTTCGGCTTGCCT
JMSF026N04+           GGGAACTGGAGCCCCGCCTTAGAAGATCGAGACACCGACTTCGTGGCTTTCGGCTTGCCT
rJMSF026N04-          GGGAACTGGAGCCCCGCCTTAGAAGATCGAGACACCGACTTCGTGGCTTTCGGCTTGCCT
                      ____________________________________________________________
consensus             GGGAACTGGAGCCCCGCCTTAGAAGATCGAGACACCGACTTCGTGGCTTTCGGCTTGCCT
 
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rJMFF012O15-          CTGCCGGCGCCGCCCTTCCCTGCACCCGCGCCGCTTGAACTCATTCTTAGTTACGTAACC
JMFF012O15+           CTGCCGGCGCCGCCCTTCCCTGCACCCGCGCCGCTTGAACTCATTCTTAGTTACGTAACC
JMSF026N04+           CTGCCGGCGCCGCCCTTCCCTGCACCCGCGCCGCTTGAACTCATTCTTAGTTACGTAACC
rJMSF026N04-          CTGCCGGCGCCGCCCTTCCCTGCACCCGCGCCGCTTGAACTCATTCTTAGTTACGTAACC
                      ____________________________________________________________
consensus             CTGCCGGCGCCGCCCTTCCCTGCACCCGCGCCGCTTGAACTCATTCTTAGTTACGTAACC
 
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rJMFF012O15-          CTAATTAACTCTCAATTCTCTGAAAACTCTAGACTCCAACCCACAGAAATTCTCGCCTT 
JMFF012O15+           CTAATTAACTCTCAATTCTCTGAAAACTCTAGACTCCAACCCACAGAAATTCTCGCCTT 
JMSF026N04+           CTAATTAACTCTCAATTCTCTGAAAACTCTAGACTCCAACCCACAGAAATTCTCGCCTT 
rJMSF026N04-          CTAATTAACTCTCAATTCTCTGAAAACTCTAGACTCCAACCCACAGAAATTCTCGCCTTC
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consensus             CTAATTAACTCTCAATTCTCTGAAAACTCTAGACTCCAACCCACAGAAATTCTCGCCTTC