Contig 002869:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A07Sequence239002869 (6)ref|XP_011078093.1|3e-17PREDICTED: RING-box protein 1a [Sesamum indicum]324002869 (6)gb|EYU25848.1|2e-39hypothetical protein MIMGU_mgv1a022668mg, partial [Erythranthe guttata]
JMSF004O09Sequence335002869 (6)gb|EYU25848.1|7e-37hypothetical protein MIMGU_mgv1a022668mg, partial [Erythranthe guttata]
JMSF026D14Sequence550002869 (6)gb|EYU28326.1|1e-64hypothetical protein MIMGU_mgv1a016386mg [Erythranthe guttata]503002869 (6)gb|EYU28326.1|8e-65hypothetical protein MIMGU_mgv1a016386mg [Erythranthe guttata]
JMSF031P09Sequence629010773 (5)ref|XP_010551185.1|4e-116PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian340002869 (6)ref|NP_001235984.1|5e-32uncharacterized protein LOC100526919 [Glycine max] gb|ACU15939.1| unknown [Glyci

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026D14- GTCAATTTCTCTGGTCTCC
rJMSF031P09+ GTCAATTTNTNTGGTNTCC
JMSF004A07- GTCAATTTCTCTGGTCTCC
rJMSF026D14+ GAGCGTCAATTTCTCTGGTCTCC
                      ____________________________________________________________
consensus GAGCGTCAATTTCTCTGGTCTCC
 
. : . : . : . : . : . :
JMSF026D14- CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
rJMSF031P09+ CCCGGAGCAATCCAAGTCCTCGNTTTGATCCAATGGCAACTCTGGACACTGANGTCACCA
JMSF004A07- CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
rJMSF026D14+ CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
                      ____________________________________________________________
consensus CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
 
. : . : . : . : . : . :
JMSF026D14- TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
rJMSF031P09+ NGGTTCCGNCCGGGGAGGGCTCTAGNGCCGANGAACCTTAGACTTCCTCNTCANCGAAGA
JMSF004A07- TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
rJMSF026D14+ TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
                      ____________________________________________________________
consensus TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
 
. : . : . : . : . : . :
JMSF026D14- AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
rJMSF031P09+ AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTNTGGGCTTGGGATATCG
JMSF004A07- AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
rJMSF026D14+ AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
                      ____________________________________________________________
consensus AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
 
. : . : . : . : . : . :
rJMSF004A07+ TAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
JMSF026D14- TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
rJMSF031P09+ TGGTGGACAACTGTGNTATTTGTAGGAACCATATCATGGATNTNTGTATTGAGTGTCAAG
JMSF004A07- TGGTGGACAACTGTGCTATTTGTAGGAACCATATCA
rJMSF004O09+ GTAGGAACCANATCATGGATCTATGTATTGAGTGTCAAG
rJMSF026D14+ TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
                      ____________________________________________________________
consensus TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
 
. : . : . : . : . : . :
rJMSF004A07+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
JMSF026D14- CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
rJMSF031P09+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTNGGGGTGTTTGCAACCACG
rJMSF004O09+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTNGCAACCACG
rJMSF026D14+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
                      ____________________________________________________________
consensus CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
 
. : . : . : . : . : . :
rJMSF004A07+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
JMSF026D14- CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
rJMSF031P09+ CATT
rJMSF004O09+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
rJMSF026D14+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
                      ____________________________________________________________
consensus CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
 
. : . : . : . : . : . :
rJMSF004A07+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
JMSF026D14- ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
rJMSF004O09+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
rJMSF026D14+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGAGCAGCATTTATGGTATCAAGATGA
                      ____________________________________________________________
consensus ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGAGCAGCATTTATGGTATCAAGATGA
 
. : . : . : . : . : . :
rJMSF026D14+ GACTCCCTATTTGTTGTTTATGGAACTTTGGAACCAGGTAAGTTATTGTGATGTGAATTT
                      ____________________________________________________________
consensus GACTCCCTATTTGTTGTTTATGGAACTTTGGAACCAGGTAAGTTATTGTGATGTGAATTT