| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF004A07 | Sequence | 239 | 002869 (6) | ref|XP_011078093.1| | 3e-17 | PREDICTED: RING-box protein 1a [Sesamum indicum] | 324 | 002869 (6) | gb|EYU25848.1| | 2e-39 | hypothetical protein MIMGU_mgv1a022668mg, partial [Erythranthe guttata] |
| JMSF004O09 | Sequence | 335 | 002869 (6) | gb|EYU25848.1| | 7e-37 | hypothetical protein MIMGU_mgv1a022668mg, partial [Erythranthe guttata] | |||||
| JMSF026D14 | Sequence | 550 | 002869 (6) | gb|EYU28326.1| | 1e-64 | hypothetical protein MIMGU_mgv1a016386mg [Erythranthe guttata] | 503 | 002869 (6) | gb|EYU28326.1| | 8e-65 | hypothetical protein MIMGU_mgv1a016386mg [Erythranthe guttata] |
| JMSF031P09 | Sequence | 629 | 010773 (5) | ref|XP_010551185.1| | 4e-116 | PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABG3f [Tarenaya hasslerian | 340 | 002869 (6) | ref|NP_001235984.1| | 5e-32 | uncharacterized protein LOC100526919 [Glycine max] gb|ACU15939.1| unknown [Glyci |
This contig is upended
. : . : . : . : . : . :
JMSF026D14- GTCAATTTCTCTGGTCTCC
rJMSF031P09+ GTCAATTTNTNTGGTNTCC
JMSF004A07- GTCAATTTCTCTGGTCTCC
rJMSF026D14+ GAGCGTCAATTTCTCTGGTCTCC
____________________________________________________________
consensus GAGCGTCAATTTCTCTGGTCTCC
. : . : . : . : . : . :
JMSF026D14- CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
rJMSF031P09+ CCCGGAGCAATCCAAGTCCTCGNTTTGATCCAATGGCAACTCTGGACACTGANGTCACCA
JMSF004A07- CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
rJMSF026D14+ CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
____________________________________________________________
consensus CCCGGAGCAATCCAAGTCCTCGCTTTGATCCAATGGCAACTCTGGACACTGACGTCACCA
. : . : . : . : . : . :
JMSF026D14- TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
rJMSF031P09+ NGGTTCCGNCCGGGGAGGGCTCTAGNGCCGANGAACCTTAGACTTCCTCNTCANCGAAGA
JMSF004A07- TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
rJMSF026D14+ TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
____________________________________________________________
consensus TGGTTCCGGCCGGGGAGGGCTCTAGCGCCGACGAACCTTCGACTTCCTCCTCAACGAAGA
. : . : . : . : . : . :
JMSF026D14- AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
rJMSF031P09+ AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTNTGGGCTTGGGATATCG
JMSF004A07- AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
rJMSF026D14+ AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
____________________________________________________________
consensus AAGGCAAGAAATTCGAGATCAAAAAGTGGAACGCCGTTTCTCTCTGGGCTTGGGATATCG
. : . : . : . : . : . :
rJMSF004A07+ TAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
JMSF026D14- TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
rJMSF031P09+ TGGTGGACAACTGTGNTATTTGTAGGAACCATATCATGGATNTNTGTATTGAGTGTCAAG
JMSF004A07- TGGTGGACAACTGTGCTATTTGTAGGAACCATATCA
rJMSF004O09+ GTAGGAACCANATCATGGATCTATGTATTGAGTGTCAAG
rJMSF026D14+ TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
____________________________________________________________
consensus TGGTGGACAACTGTGCTATTTGTAGGAACCATATCATGGATCTATGTATTGAGTGTCAAG
. : . : . : . : . : . :
rJMSF004A07+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
JMSF026D14- CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
rJMSF031P09+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTNGGGGTGTTTGCAACCACG
rJMSF004O09+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTNGCAACCACG
rJMSF026D14+ CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
____________________________________________________________
consensus CCAATCAAGCTAGTGCCACAAGTGAGGAGTGTACTGTTGCTTGGGGTGTTTGCAACCACG
. : . : . : . : . : . :
rJMSF004A07+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
JMSF026D14- CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
rJMSF031P09+ CATT
rJMSF004O09+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
rJMSF026D14+ CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
____________________________________________________________
consensus CATTCCACTTCCACTGCATTAGCCGATGGCTCAAGACTCGTCAAGTGTGCCCATTGGATA
. : . : . : . : . : . :
rJMSF004A07+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
JMSF026D14- ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
rJMSF004O09+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGA
rJMSF026D14+ ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGAGCAGCATTTATGGTATCAAGATGA
____________________________________________________________
consensus ACAGCGAATGGGAGTTTCAGAAGTATGGTCACTAGAGCAGCATTTATGGTATCAAGATGA
. : . : . : . : . : . :
rJMSF026D14+ GACTCCCTATTTGTTGTTTATGGAACTTTGGAACCAGGTAAGTTATTGTGATGTGAATTT
____________________________________________________________
consensus GACTCCCTATTTGTTGTTTATGGAACTTTGGAACCAGGTAAGTTATTGTGATGTGAATTT