| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027P16 | Sequence | 526 | 004372 (4) | ref|XP_004231632.1| | 7e-67 | PREDICTED: probable acyl-activating enzyme 6 [Solanum lycopersicum] | 581 | 002864 (3) | gb|EYU25663.1| | 3e-68 | hypothetical protein MIMGU_mgv1a019009mg [Erythranthe guttata] |
| JMSF025J24 | Sequence | 508 | 004372 (4) | ref|XP_010250375.1| | 2e-50 | PREDICTED: probable acyl-activating enzyme 5, peroxisomal [Nelumbo nucifera] | 725 | 002864 (3) | emb|CBI24031.3| | 5e-106 | unnamed protein product [Vitis vinifera] |
| JMSF034B21 | Sequence | 631 | 004372 (4) | ref|XP_004231632.1| | 1e-68 | PREDICTED: probable acyl-activating enzyme 6 [Solanum lycopersicum] | 714 | 002864 (3) | emb|CBI24031.3| | 6e-117 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF034B21+ GAACAAATNGAACNAATTTCCGGCCGAGGAAAAAGNG
rJMSF025J24+ G
____________________________________________________________
consensus GAACAAATNGAACNAATTTCCGGCCGAGGAAAAAGNG
. : . : . : . : . : . :
rJMSF034B21+ AAGCTAAAAGCCAGACAGGGAGTGAGAA-CCATCGCAATGACAGAAGTGGACGTCGTGGA
rJMSF025J24+ AAGCTAAAAGCCAGACAGGGAGTGAGAACCCATCGCAATGACAGAAGTGGACGTCGTGGA
____________________________________________________________
consensus AAGCTAAAAGCCAGACAGGGAGTGAGAACCCATCGCAATGACAGAAGTGGACGTCGTGGA
. : . : . : . : . : . :
rJMSF034B21+ TCCCGACACAGGGCGGAGCGTGAAGCGAGACGGGGCGACTCTCGGCGAGGTTGTTTTCAA
rJMSF025J24+ TCCCGACACAGGGCGGAGCGTGAAGCGAGACGGGGCGACTCTCGGCGAGGTTGTTTTCAA
____________________________________________________________
consensus TCCCGACACAGGGCGGAGCGTGAAGCGAGACGGGGCGACTCTCGGCGAGGTTGTTTTCAA
. : . : . : . : . : . :
rJMSF034B21+ AGGAGGCTGTATTATGCTAGGATACCTTAAAGACCCAGAAGGGACCGCCAAATGCTTGAA
rJMSF025J24+ AGGAGGCTGTATTATGCTAGGATACCTTAAAGACCCAGAAGGGACCGCCAAATGCTTGAA
____________________________________________________________
consensus AGGAGGCTGTATTATGCTAGGATACCTTAAAGACCCAGAAGGGACCGCCAAATGCTTGAA
. : . : . : . : . : . :
rJMSF034B21+ ACCAGACGGGTGGTTTTACACGGGGGACGTCGGGGTGATGCACCCCGACGGCTACCTGGA
rJMFF027P16+ GGCTACCTGGA
rJMSF025J24+ ACCAGACGGGTGGTTTTACACGGGGGACGTCGGGGTGATGCACCCCGACGGCTACCTGGA
____________________________________________________________
consensus ACCAGACGGGTGGTTTTACACGGGGGACGTCGGGGTGATGCACCCCGACGGCTACCTGGA
. : . : . : . : . : . :
rJMSF034B21+ AATCAAGGACCGGTCAAAGGACGTGATCATCAGCGGCGGGGAGAATCTGAGCAGCGTGGA
rJMFF027P16+ AATCAAGGACCGGTCAAAGGACGTGATCATCAGCGGCGGGGAGAATCTGAGCAGCGTGGA
rJMSF025J24+ AATCAAGGACCGGTCAAAGGACGTGATCATCAGCGGCGGGGAGAATCTGAGCAGCGTGGA
____________________________________________________________
consensus AATCAAGGACCGGTCAAAGGACGTGATCATCAGCGGCGGGGAGAATCTGAGCAGCGTGGA
. : . : . : . : . : . :
rJMSF034B21+ GGTAGAGTCGGTGCTGTACATGCACCCGGCGGTGAACGAGGCGGCGGTGGTGGCCCGGCC
rJMFF027P16+ GGTAGAGTCGGTGCTGTACATGCACCCGGCGGTGAACGAGGCGGCGGTGGTGGCCCGGCC
rJMSF025J24+ GGTAGAGTCGGTGCTGTACATGCACCCGGCGGTGAACGAGGCGGCGGTGGTGGCCCGGCC
____________________________________________________________
consensus GGTAGAGTCGGTGCTGTACATGCACCCGGCGGTGAACGAGGCGGCGGTGGTGGCCCGGCC
. : . : . : . : . : . :
rJMSF034B21+ GGATGAGTTCTGGGGCGAAACGCCCTGCGCTTTCTTGAGCTTGAAGGCCGGCGTAACCAA
rJMFF027P16+ GGATGAGTTCTGGGGCGAAACGCCCTGCGCTTTCTTGAGCTTGAAGGCCGGCGTAACCAA
rJMSF025J24+ GGATGAGTTCTGGGGCGAAACGCCCTGCGCTTTCTTGAGCTTGAAGGCCGGCGTAACCAA
____________________________________________________________
consensus GGATGAGTTCTGGGGCGAAACGCCCTGCGCTTTCTTGAGCTTGAAGGCCGGCGTAACCAA
. : . : . : . : . : . :
rJMSF034B21+ GAAGCCGACGGAGAAAGAAATCATGGAGTTCTGTAGAGCAAGAATGCCGCATTTCATGGT
rJMFF027P16+ GAAGCCGACGGAGAAAGAAATCATGGAGTTCTGTAGAGCAAGAATGCCGCATTTCATGGT
rJMSF025J24+ GAAGCCGACGGAGAAAGAAATCATGGAGTTCTGTAGAGCAAGAATGCCGCATTTCATGGT
____________________________________________________________
consensus GAAGCCGACGGAGAAAGAAATCATGGAGTTCTGTAGAGCAAGAATGCCGCATTTCATGGT
. : . : . : . : . : . :
rJMSF034B21+ TCCAAAAACAGTGGTGTTTCAGGATGATCTTCCCAAGACCTCCACCGGGAAGATTCAGAA
rJMFF027P16+ TCCAAAAACAGTGGTGTTTCAGGATGATCTTCCCAAGACCTCCACCGGGAAGATTCAGAA
rJMSF025J24+ TCCAAAAACAGTGGTGTTTCAGGATGATCTTCCCAAGACCTCCACCGGGAAGATTCAGAA
____________________________________________________________
consensus TCCAAAAACAGTGGTGTTTCAGGATGATCTTCCCAAGACCTCCACCGGGAAGATTCAGAA
. : . : . : . : . : . :
rJMSF034B21+ GTTCTTGCTCAGGGAGACGGCTAAAGCCATGGGCAGCTCCAAGCTGCAGAGGAAGAGTAG
rJMFF027P16+ GTTCTTGCTCAGGGAGACGGCTAAAGCCATGGGCAGCTCCAAGCTGCAGAGGAAGAGTAG
rJMSF025J24+ GTTCTTGCTCAGGGAGACGGCTAAAGCCATGGGCAGCTCCAAGCTGCAGAGGAAGAGTAG
____________________________________________________________
consensus GTTCTTGCTCAGGGAGACGGCTAAAGCCATGGGCAGCTCCAAGCTGCAGAGGAAGAGTAG
. : . : . : . : . : . :
rJMSF034B21+ AATGTAGTTAAATTCAGTATGAATTGAGTGTTCCAAGTTCAAACAACCACGATTGTTTCC
rJMFF027P16+ AATGTAGTTAAATTCAGTATGAATTGAGTGTTCCAAGTTCAAACAACCACGATTGTTTCC
rJMSF025J24+ AATGTAGTTAAATTCAGTATGAATTGAGTGTTCCAAGTTCAAACAACCACGATTGTTTCC
____________________________________________________________
consensus AATGTAGTTAAATTCAGTATGAATTGAGTGTTCCAAGTTCAAACAACCACGATTGTTTCC
. : . : . : . : . : . :
rJMSF034B21+ TTTCAATTAATAAGCCAA
rJMFF027P16+ TTTCAATTAATAAGCCAATTGTTATCAAATAAAACACATT
rJMSF025J24+ TTTCAATTAATAAGCCAATTGTTATCAAATAAAACACATTTGTGAGATGTTTAAAGCAAT
____________________________________________________________
consensus TTTCAATTAATAAGCCAATTGTTATCAAATAAAACACATTTGTGAGATGTTTAAAGCAAT