Contig 002862:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025G15Sequence665016784emb|CDP05754.1|4e-38unnamed protein product [Coffea canephora]732002862 (3)gb|KHG00761.1|2e-57hypothetical protein F383_21322 [Gossypium arboreum]
JMSF042D24Sequence762002862 (3)ref|XP_006452332.1|5e-117hypothetical protein CICLE_v10007979mg [Citrus clementina] gb|ESR65572.1| hypoth756002862 (3)gb|KHG00761.1|5e-60hypothetical protein F383_21322 [Gossypium arboreum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042D24- CAGAGCTAGAGCAAGCTCGAGCTCGAGTTCAAGA
                      ____________________________________________________________
consensus CAGAGCTAGAGCAAGCTCGAGCTCGAGTTCAAGA
 
. : . : . : . : . : . :
JMSF042D24- ACTCGAGACAGAGCGGAAATCATCCAAAAAGAAACTCGAGCAGTTTCTGAAGAAACTCAG
                      ____________________________________________________________
consensus ACTCGAGACAGAGCGGAAATCATCCAAAAAGAAACTCGAGCAGTTTCTGAAGAAACTCAG
 
. : . : . : . : . : . :
JMSF042D24- TGAAGAAAGGGCAGCGTGGAGAAGCAGAGAGCACGAGAAAATCCGGGCGATTTTAGATGA
                      ____________________________________________________________
consensus TGAAGAAAGGGCAGCGTGGAGAAGCAGAGAGCACGAGAAAATCCGGGCGATTTTAGATGA
 
. : . : . : . : . : . :
JMSF042D24- CATGAAAGCTGAGTTGAAGAGAGAAATGAAAAACCGGCAAAGGCTGGAGATAGTTAATTC
                      ____________________________________________________________
consensus CATGAAAGCTGAGTTGAAGAGAGAAATGAAAAACCGGCAAAGGCTGGAGATAGTTAATTC
 
. : . : . : . : . : . :
JMSF042D24- CAAGCTAGTTAACGAGTTGGCTGATGCCAAGGTATCGGTGAAACGCTATTTGCAGGAGCT
                      ____________________________________________________________
consensus CAAGCTAGTTAACGAGTTGGCTGATGCCAAGGTATCGGTGAAACGCTATTTGCAGGAGCT
 
. : . : . : . : . : . :
JMSF042D24- GGAGAAAGAGCAGAAGGCGAGGGAGCTGATAGAGGAGGTATGCGATGAACTAGCAAAGGA
                      ____________________________________________________________
consensus GGAGAAAGAGCAGAAGGCGAGGGAGCTGATAGAGGAGGTATGCGATGAACTAGCAAAGGA
 
. : . : . : . : . : . :
JMSF042D24- AATCGGGGAAGACAAGGCGGAAATCGAAGCATTGAAGAGGGAATCTGCGAAGCTCCACGA
                      ____________________________________________________________
consensus AATCGGGGAAGACAAGGCGGAAATCGAAGCATTGAAGAGGGAATCTGCGAAGCTCCACGA
 
. : . : . : . : . : . :
JMSF042D24- GGAAGTGGATGACGAGAGAAAGATGCTGCAGATGGCCGAGGTTTGGCGCGAGGAACGGGT
                      ____________________________________________________________
consensus GGAAGTGGATGACGAGAGAAAGATGCTGCAGATGGCCGAGGTTTGGCGCGAGGAACGGGT
 
. : . : . : . : . : . :
JMSF042D24- TCAAATGAAGCTAGTCGATGCCAAGGTGACACTAGAAGATAAGTACTCGCAAATGAACCA
                      ____________________________________________________________
consensus TCAAATGAAGCTAGTCGATGCCAAGGTGACACTAGAAGATAAGTACTCGCAAATGAACCA
 
. : . : . : . : . : . :
JMSF042D24- ATTGATAGTCGAACTAGAGTCGTTTTTAAGGTCTAGAGGCGCAACCGAGGATATGAAAGA
                      ____________________________________________________________
consensus ATTGATAGTCGAACTAGAGTCGTTTTTAAGGTCTAGAGGCGCAACCGAGGATATGAAAGA
 
. : . : . : . : . : . :
JMSF042D24- AGTGGATCAACTTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
rJMSF042D24+ TTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
rJMSF025G15+ ATTCAAGTACGA
                      ____________________________________________________________
consensus AGTGGATCAACTTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
 
. : . : . : . : . : . :
JMSF042D24- GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
rJMSF042D24+ GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
rJMSF025G15+ GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
                      ____________________________________________________________
consensus GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
 
. : . : . : . : . : . :
JMSF042D24- CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
rJMSF042D24+ CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
rJMSF025G15+ CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
                      ____________________________________________________________
consensus CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
 
. : . : . : . : . : . :
JMSF042D24- NAGGCATT
rJMSF042D24+ AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
rJMSF025G15+ AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
                      ____________________________________________________________
consensus AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
 
. : . : . : . : . : . :
rJMSF042D24+ CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTTTAAACAAGAATTG
rJMSF025G15+ CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTCTAAACAAGAATTG
                      ____________________________________________________________
consensus CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTTTAAACAAGAATTG
 
. : . : . : . : . : . :
rJMSF042D24+ CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
rJMSF025G15+ CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
                      ____________________________________________________________
consensus CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
 
. : . : . : . : . : . :
rJMSF042D24+ GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
rJMSF025G15+ GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
                      ____________________________________________________________
consensus GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
 
. : . : . : . : . : . :
rJMSF042D24+ ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
rJMSF025G15+ ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
                      ____________________________________________________________
consensus ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
 
. : . : . : . : . : . :
rJMSF042D24+ CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
rJMSF025G15+ CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
                      ____________________________________________________________
consensus CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
 
. : . : . : . : . : . :
rJMSF042D24+ TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
rJMSF025G15+ TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
                      ____________________________________________________________
consensus TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
 
. : . : . : . : . : . :
rJMSF042D24+ CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
rJMSF025G15+ CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
                      ____________________________________________________________
consensus CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
 
. : . : . : . : . : . :
rJMSF042D24+ ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
rJMSF025G15+ ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
                      ____________________________________________________________
consensus ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
 
. : . : . : . : . : . :
rJMSF042D24+ AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATAC
rJMSF025G15+ AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATACTCATCTTCTTCTGTT
                      ____________________________________________________________
consensus AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATACTCATCTTCTTCTGTT