Contig 002862:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042D24-                                     CAGAGCTAGAGCAAGCTCGAGCTCGAGTTCAAGA
                      ____________________________________________________________
consensus                                       CAGAGCTAGAGCAAGCTCGAGCTCGAGTTCAAGA
 
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JMSF042D24-           ACTCGAGACAGAGCGGAAATCATCCAAAAAGAAACTCGAGCAGTTTCTGAAGAAACTCAG
                      ____________________________________________________________
consensus             ACTCGAGACAGAGCGGAAATCATCCAAAAAGAAACTCGAGCAGTTTCTGAAGAAACTCAG
 
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JMSF042D24-           TGAAGAAAGGGCAGCGTGGAGAAGCAGAGAGCACGAGAAAATCCGGGCGATTTTAGATGA
                      ____________________________________________________________
consensus             TGAAGAAAGGGCAGCGTGGAGAAGCAGAGAGCACGAGAAAATCCGGGCGATTTTAGATGA
 
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JMSF042D24-           CATGAAAGCTGAGTTGAAGAGAGAAATGAAAAACCGGCAAAGGCTGGAGATAGTTAATTC
                      ____________________________________________________________
consensus             CATGAAAGCTGAGTTGAAGAGAGAAATGAAAAACCGGCAAAGGCTGGAGATAGTTAATTC
 
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JMSF042D24-           CAAGCTAGTTAACGAGTTGGCTGATGCCAAGGTATCGGTGAAACGCTATTTGCAGGAGCT
                      ____________________________________________________________
consensus             CAAGCTAGTTAACGAGTTGGCTGATGCCAAGGTATCGGTGAAACGCTATTTGCAGGAGCT
 
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JMSF042D24-           GGAGAAAGAGCAGAAGGCGAGGGAGCTGATAGAGGAGGTATGCGATGAACTAGCAAAGGA
                      ____________________________________________________________
consensus             GGAGAAAGAGCAGAAGGCGAGGGAGCTGATAGAGGAGGTATGCGATGAACTAGCAAAGGA
 
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JMSF042D24-           AATCGGGGAAGACAAGGCGGAAATCGAAGCATTGAAGAGGGAATCTGCGAAGCTCCACGA
                      ____________________________________________________________
consensus             AATCGGGGAAGACAAGGCGGAAATCGAAGCATTGAAGAGGGAATCTGCGAAGCTCCACGA
 
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JMSF042D24-           GGAAGTGGATGACGAGAGAAAGATGCTGCAGATGGCCGAGGTTTGGCGCGAGGAACGGGT
                      ____________________________________________________________
consensus             GGAAGTGGATGACGAGAGAAAGATGCTGCAGATGGCCGAGGTTTGGCGCGAGGAACGGGT
 
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JMSF042D24-           TCAAATGAAGCTAGTCGATGCCAAGGTGACACTAGAAGATAAGTACTCGCAAATGAACCA
                      ____________________________________________________________
consensus             TCAAATGAAGCTAGTCGATGCCAAGGTGACACTAGAAGATAAGTACTCGCAAATGAACCA
 
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JMSF042D24-           ATTGATAGTCGAACTAGAGTCGTTTTTAAGGTCTAGAGGCGCAACCGAGGATATGAAAGA
                      ____________________________________________________________
consensus             ATTGATAGTCGAACTAGAGTCGTTTTTAAGGTCTAGAGGCGCAACCGAGGATATGAAAGA
 
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JMSF042D24-           AGTGGATCAACTTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
rJMSF042D24+                     TTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
rJMSF025G15+                                                          ATTCAAGTACGA
                      ____________________________________________________________
consensus             AGTGGATCAACTTCGACAAGCAGCTTCCGATATGAATACCGGGCAAGAATTCAAGTACGA
 
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JMSF042D24-           GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
rJMSF042D24+          GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
rJMSF025G15+          GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
                      ____________________________________________________________
consensus             GCCCCCAAATCCAGGTGACATTTTCTCCGTTCTTGAAGACGTTTATTTTGCTGAAGCGAA
 
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JMSF042D24-           CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
rJMSF042D24+          CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
rJMSF025G15+          CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
                      ____________________________________________________________
consensus             CGAGAAGGATATTATTGAAGCTCAAGAAGATGTTAGTATGCTTAATAAACCCAATTTTCC
 
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JMSF042D24-           NAGGCATT                                                    
rJMSF042D24+          AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
rJMSF025G15+          AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
                      ____________________________________________________________
consensus             AAGGCATTGCAACGAACTAGACGAAGAGGGGACCGAGTGGGAAACCATCAGCCATCTCGA
 
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rJMSF042D24+          CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTTTAAACAAGAATTG
rJMSF025G15+          CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTCTAAACAAGAATTG
                      ____________________________________________________________
consensus             CGATGAGCAAGGATCCAGCTATTCACCCGGCGCGAGTGATCATTCTTTAAACAAGAATTG
 
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rJMSF042D24+          CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
rJMSF025G15+          CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
                      ____________________________________________________________
consensus             CCAGCTCAGCGATGGCGATGGAAAACCACCCGTCGATATCCAAAATCAGCAACTGAAAAT
 
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rJMSF042D24+          GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
rJMSF025G15+          GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
                      ____________________________________________________________
consensus             GTCCTCGATATCCAGACTCTGGAGATCACGCCCGAGCAATGGTCAGAATTACAAAATCAT
 
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rJMSF042D24+          ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
rJMSF025G15+          ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
                      ____________________________________________________________
consensus             ATCATTGGAGGGAATAAAGGCGGGGAGGTATTCCAATGAAAGACCTTCTAACGCCACTAT
 
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rJMSF042D24+          CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
rJMSF025G15+          CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
                      ____________________________________________________________
consensus             CATGTCCCCCGGGCTTAGCCCCTCGGAGCAATGGAGCTCGCCTGATTCCTCAGGCCATCC
 
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rJMSF042D24+          TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
rJMSF025G15+          TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
                      ____________________________________________________________
consensus             TCATTTAACCCGAGGCATGAAAGGATGCATTGAGTGGCCGCGAAACTCACAGAAGAGCAG
 
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rJMSF042D24+          CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
rJMSF025G15+          CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
                      ____________________________________________________________
consensus             CTTGAAAGCCAAACTGCTGGAGGCAAGAATGGAGAGCCAGAAGATCCAGTTGAGACATGT
 
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rJMSF042D24+          ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
rJMSF025G15+          ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
                      ____________________________________________________________
consensus             ACTAAAACAGAAAATTTAGAGCTGAGCTTTGAATGTGTAGCTTATCAGATAAGAGAGTTA
 
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rJMSF042D24+          AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATAC               
rJMSF025G15+          AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATACTCATCTTCTTCTGTT
                      ____________________________________________________________
consensus             AAGCAAAGCAGGAAGGCATTTCTTGCTTTTATTTGTAAGCTATACTCATCTTCTTCTGTT