| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF024J01 | Sequence | 650 | 000765 (2) | gb|AFU52654.1| | 1e-59 | beta-1,3-glucanase 21 [Solanum tuberosum] | 748 | 002861 (3) | ref|XP_009778460.1| | 1e-50 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana sylvestris] ref|XP_0097 |
| JMSF025E08 | Sequence | 682 | 007904 (9) | gb|EYU19240.1| | 2e-81 | hypothetical protein MIMGU_mgv1a014729mg [Erythranthe guttata] | 757 | 002861 (3) | ref|XP_009778460.1| | 7e-59 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana sylvestris] ref|XP_0097 |
| JMSF025J09 | Sequence | 645 | 000765 (2) | gb|AFU52654.1| | 2e-65 | beta-1,3-glucanase 21 [Solanum tuberosum] | 763 | 002861 (3) | ref|XP_009778460.1| | 8e-59 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana sylvestris] ref|XP_0097 |
This contig is upended
. : . : . : . : . : . :
rJMSF025E08+ TAGTCAGCCTGGAATTCCCATTAATTCTTATATATATGAGTTGTTTAATGAGGACAAA
rJMSF025J09+ TAGTCAGCCTGGAATTCCCATTAATTCTTATATATATGAGTTGTTTAATGAGGACAAA
rJMSF024J01+ TTAATGAGGACAAA
____________________________________________________________
consensus TAGTCAGCCTGGAATTCCCATTAATTCTTATATATATGAGTTGTTTAATGAGGACAAA
. : . : . : . : . : . :
rJMSF025E08+ AGGCCTGGACCTGTCTCTGAGAGAAGCTGGGGTATAATTTTTCCAAATGGGAGTGCAGTT
rJMSF025J09+ AGGCCTGGACCTGTCTCTGAGAGAAGCTGGGGTATAATTTTTCCAAATGGGAGTGCAGTT
rJMSF024J01+ AGGCCTGGACCTGTCTCTGAGAGAAGCTGGGGTATAATTTTTCCAAATGGGAGTGCAGTT
____________________________________________________________
consensus AGGCCTGGACCTGTCTCTGAGAGAAGCTGGGGTATAATTTTTCCAAATGGGAGTGCAGTT
. : . : . : . : . : . :
rJMSF025E08+ TATCCCCTAAATTTGGACGGTTTGGGCAACATTTCTGATAATTCTTCTGCAGTGTTCTGT
rJMSF025J09+ TATCCCCTAAATTTGGACGGTTTGGGCAACATTTCTGATAATTCTTCTGCAGTGTTCTGT
rJMSF024J01+ TATCCCCTAAATTTGGACGGTTTGGGCAACATTTCTGATAATTCTTCTGCAGTGTTCTGT
____________________________________________________________
consensus TATCCCCTAAATTTGGACGGTTTGGGCAACATTTCTGATAATTCTTCTGCAGTGTTCTGT
. : . : . : . : . : . :
rJMSF025E08+ ATAGCAAAGCCTGGGGTAGAAGCTAAGAAGCTGCAAAGTGGACTTAACTGGGCATGTGGG
rJMSF025J09+ ATAGCAAAGCCTGGGGTAGAAGCTAAGAAGCTGCAAAGTGGACTTAACTGGGCATGTGGG
rJMSF024J01+ ATAGCAAAGCCTGGGGTAGAAGCTAAGAAGCTGCAAAGTGGACTTAACTGGGCATGTGGG
____________________________________________________________
consensus ATAGCAAAGCCTGGGGTAGAAGCTAAGAAGCTGCAAAGTGGACTTAACTGGGCATGTGGG
. : . : . : . : . : . :
rJMSF025E08+ CAAGGGCATGCTAATTGCTCCGACATTCAACCAGGAAAACGTTGTTATTTCCCCGATAAT
rJMSF025J09+ CAAGGGCATGCTAATTGCTCCGACATTCAACCAGGAAAACGTTGTTATTTCCCCGATAAT
rJMSF024J01+ CAAGGGCATGCTAATTGCTCCGACATTCAACCAGGAAAACGTTGTTATTTCCCCGATAAT
____________________________________________________________
consensus CAAGGGCATGCTAATTGCTCCGACATTCAACCAGGAAAACGTTGTTATTTCCCCGATAAT
. : . : . : . : . : . :
rJMSF025E08+ TTGGAAAACCATGCTTCTTATGCCTACAATGACTATTATCAGAAAATGCATACTCTGGGA
rJMSF025J09+ TTGGAAAACCATGCTTCTTATGCCTACAATGACTATTATCAGAAAATGCATACTCTGGGA
rJMSF024J01+ TTGGAAAACCATGCTTCTTATGCCTACAATGACTATTATCAGAAAATGCATACTCTCGGA
____________________________________________________________
consensus TTGGAAAACCATGCTTCTTATGCCTACAATGACTATTATCAGAAAATGCATACTCTGGGA
. : . : . : . : . : . :
rJMSF025E08+ GGAACTTGTGACTTCGATGGCACAGCAACCACCACAACAAGGGATCCCAGTTATGGGTCT
rJMSF025J09+ GGAACTTGTGACTTCGATGGCACAGCAACCACCACAACAAGGGATCCCAGTTATGGGTCT
rJMSF024J01+ GGAACTTGTGACTTCGATGGCACAGCAACCACCACAACAAGGGATCCCAGTTATGGGTCT
____________________________________________________________
consensus GGAACTTGTGACTTCGATGGCACAGCAACCACCACAACAAGGGATCCCAGTTATGGGTCT
. : . : . : . : . : . :
rJMSF025E08+ TGTAGCTTTACTGGAAGTTCAAATTCAAGTATAGCCGGTGTGTTCCCTTCCACTGCATTA
rJMSF025J09+ TGTAGCTTTACTGGAAGTTCAAATTCAAGTATAGCCGGTGTGTTCCCTTCCACTGCATTA
rJMSF024J01+ TGTAGCTTTACTGGAAGTTCAAATTCAAGTATAGCCGGTGTGTTCCCTTCCACTGCATTA
____________________________________________________________
consensus TGTAGCTTTACTGGAAGTTCAAATTCAAGTATAGCCGGTGTGTTCCCTTCCACTGCATTA
. : . : . : . : . : . :
rJMSF025E08+ GGGCCTGCAAGCCCTGTAACTGCTAAAGGTCGGAGGACTCTAGCTCCTGATCTCGGGAAT
rJMSF025J09+ GGGCCTGCAAGCCCTGTAACTGCTAAAGGTCGGAGGACTCTAGCTCCTGATCTCGGGAAT
rJMSF024J01+ GGGCCTGCAAGCCCTGTAACTGCTAAAGGTCGGAGGACTCTAGCTCCTGATCTCGGGAAT
____________________________________________________________
consensus GGGCCTGCAAGCCCTGTAACTGCTAAAGGTCGGAGGACTCTAGCTCCTGATCTCGGGAAT
. : . : . : . : . : . :
rJMSF025E08+ ATTTTGGTGATATTTCTTGCGGTGTTGTTGCTCGAGGTAAATGTAATGTCGAGATCTTGA
rJMSF025J09+ ATTTTGGTGATATTTCTTGCGGTGTTGTTGCTCGAGGTAAATGTAATGTCGAGATCTTGA
rJMSF024J01+ ATTTTGGTGATATTTCTTGCGGTGTTGTTGCTCGAGGTAAATGTAATGTCGAGATCTTGA
____________________________________________________________
consensus ATTTTGGTGATATTTCTTGCGGTGTTGTTGCTCGAGGTAAATGTAATGTCGAGATCTTGA
. : . : . : . : . : . :
rJMSF025E08+ TTCCAATTGTGCTTTGGTAATTGGTATACTATCTTAGGGATTGATTTTAGATGATTGAAG
rJMSF025J09+ TTCCAATTGTGCTTTGGTAATTGGTATACTATCTTAGGGATTGATTTTAGATGATTGAAG
rJMSF024J01+ TTCCAATTGTGCTTTGGTAATTGGTATACTATCTTAGGGATTGATTTTAGATGATTGAAG
____________________________________________________________
consensus TTCCAATTGTGCTTTGGTAATTGGTATACTATCTTAGGGATTGATTTTAGATGATTGAAG
. : . : . : . : . : . :
rJMSF025E08+ TATTCTATTCTTTTGCCACTGAGTTTCTTTTCATTGAAATGGCTGTTTTGTGCACAGTTC
rJMSF025J09+ TATTCTATTCTTTTGCCACTGAGTTTCTTTTCATTGAAATGGCTGTTTTGTGCACAGTTC
rJMSF024J01+ TATTCTATTCTTTTGCCACTGAGTTTCTTTTCATTGAAATGGCTGTTTTGTGCACAGTTC
____________________________________________________________
consensus TATTCTATTCTTTTGCCACTGAGTTTCTTTTCATTGAAATGGCTGTTTTGTGCACAGTTC
. : . : . : . : . : . :
rJMSF025E08+ CATCTTTGAAGATCATTAGCTTGCTTTGGTAGTTTGGTT
rJMSF025J09+ CATCTTTGAAGATCATTAGCTTGCTTTGGTAGTTTGGTT
rJMSF024J01+ CATCTTTGAAGATCATTAGCTTGCTTTGGTAGTTTGGTTGTGATTTCCATTTCCTTTTGT
____________________________________________________________
consensus CATCTTTGAAGATCATTAGCTTGCTTTGGTAGTTTGGTTGTGATTTCCATTTCCTTTTGT